RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 C14orf177Q52M58 125 aa8.65□□□□□ -1.02
CLCC1-202ENST00000348264 FAM231DQ6ZW35 169 aa8.65□□□□□ -1.02
CLCC1-202ENST00000348264 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
CLCC1-202ENST00000348264 GATD1Q8NB37 220 aa8.65□□□□□ -1.02
CLCC1-202ENST00000348264 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.02
CLCC1-202ENST00000348264 GFRA4Q9GZZ7 299 aa8.65□□□□□ -1.02
CLCC1-202ENST00000348264 IGLV4-60A0A075B6I1 120 aa8.64□□□□□ -1.03
CLCC1-202ENST00000348264 REG3AQ06141 175 aa8.64□□□□□ -1.03
CLCC1-202ENST00000348264 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
CLCC1-202ENST00000348264 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CLCC1-202ENST00000348264 IGLV10-54A0A075B6I4 117 aa8.63□□□□□ -1.03
CLCC1-202ENST00000348264 PRSS1P07477 247 aa8.63□□□□□ -1.03
CLCC1-202ENST00000348264 COTL1Q14019 142 aa8.63□□□□□ -1.03
CLCC1-202ENST00000348264 FAM210AQ96ND0 272 aa8.63□□□□□ -1.03
CLCC1-202ENST00000348264 SMIM7Q9BQ49 75 aa8.63□□□□□ -1.03
CLCC1-202ENST00000348264 EIF5A2Q9GZV4 153 aaKnown RBP8.63□□□□□ -1.03
CLCC1-202ENST00000348264 A0A1B0GUV1 79 aa8.62□□□□□ -1.03
CLCC1-202ENST00000348264 A8MWL6 223 aa8.62□□□□□ -1.03
CLCC1-202ENST00000348264 AMTP48728 403 aa8.62□□□□□ -1.03
CLCC1-202ENST00000348264 CT83Q5H943 113 aa8.62□□□□□ -1.03
CLCC1-202ENST00000348264 LINC01551Q86U37 167 aa8.62□□□□□ -1.03
CLCC1-202ENST00000348264 CHAC1Q9BUX1 264 aa8.62□□□□□ -1.03
CLCC1-202ENST00000348264 UBE2L6O14933 153 aa8.61□□□□□ -1.03
CLCC1-202ENST00000348264 NDUFS6O75380 124 aaKnown RBP8.6□□□□□ -1.03
CLCC1-202ENST00000348264 SRP19P09132 144 aaKnown RBP8.6□□□□□ -1.03
CLCC1-202ENST00000348264 SMIM15Q7Z3B0 74 aa8.6□□□□□ -1.03
CLCC1-202ENST00000348264 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
CLCC1-202ENST00000348264 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
CLCC1-202ENST00000348264 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
CLCC1-202ENST00000348264 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
CLCC1-202ENST00000348264 GAS8-AS1O95177 125 aa8.59□□□□□ -1.03
CLCC1-202ENST00000348264 PLA2G1BP04054 148 aaKnown RBP8.59□□□□□ -1.03
CLCC1-202ENST00000348264 TSKUQ8WUA8 353 aa8.59□□□□□ -1.03
CLCC1-202ENST00000348264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
CLCC1-202ENST00000348264 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
CLCC1-202ENST00000348264 SDHAF1A6NFY7 115 aa8.58□□□□□ -1.04
CLCC1-202ENST00000348264 TEX261Q6UWH6 196 aa8.58□□□□□ -1.04
CLCC1-202ENST00000348264 OSTCQ9NRP0 149 aa8.58□□□□□ -1.04
CLCC1-202ENST00000348264 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
CLCC1-202ENST00000348264 NCR2O95944 276 aa8.57□□□□□ -1.04
CLCC1-202ENST00000348264 APCSP02743 223 aa8.57□□□□□ -1.04
CLCC1-202ENST00000348264 KRTAP10-4P60372 401 aaPredicted RBP8.57□□□□□ -1.04
CLCC1-202ENST00000348264 DGAT2L7PQ6IED9 249 aa8.57□□□□□ -1.04
CLCC1-202ENST00000348264 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
CLCC1-202ENST00000348264 BORCS7Q96B45 105 aa8.57□□□□□ -1.04
CLCC1-202ENST00000348264 V9GYV3 84 aa8.57□□□□□ -1.04
CLCC1-202ENST00000348264 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
CLCC1-202ENST00000348264 IGKV3OR2-268A0A0C4DH90 116 aa8.56□□□□□ -1.04
CLCC1-202ENST00000348264 TRBV6-5A0A0K0K1A5 114 aa8.56□□□□□ -1.04
CLCC1-202ENST00000348264 CLRN3Q8NCR9 226 aa8.56□□□□□ -1.04
CLCC1-202ENST00000348264 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
CLCC1-202ENST00000348264 PKHD1L1Q86WI1 4243 aa8.56□□□□□ -1.04
CLCC1-202ENST00000348264 hDV102S1A0JD36 115 aa8.55□□□□□ -1.04
CLCC1-202ENST00000348264 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
CLCC1-202ENST00000348264 C9JQL5 133 aa8.55□□□□□ -1.04
CLCC1-202ENST00000348264 PANO1I0J062 215 aa8.55□□□□□ -1.04
CLCC1-202ENST00000348264 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
CLCC1-202ENST00000348264 CNBPP62633 177 aaKnown RBP8.55□□□□□ -1.04
CLCC1-202ENST00000348264 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
CLCC1-202ENST00000348264 RNASEKQ6P5S7 137 aaKnown RBP8.55□□□□□ -1.04
CLCC1-202ENST00000348264 ISOC2Q96AB3 205 aa8.55□□□□□ -1.04
CLCC1-202ENST00000348264 TMEM191AQ9H0A3 160 aa8.55□□□□□ -1.04
CLCC1-202ENST00000348264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
CLCC1-202ENST00000348264 GAGE12HA6NDE8 117 aa8.54□□□□□ -1.04
CLCC1-202ENST00000348264 I3L3M4 83 aa8.54□□□□□ -1.04
CLCC1-202ENST00000348264 TSHBP01222 138 aa8.54□□□□□ -1.04
CLCC1-202ENST00000348264 FGF6P10767 208 aa8.54□□□□□ -1.04
CLCC1-202ENST00000348264 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
CLCC1-202ENST00000348264 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
CLCC1-202ENST00000348264 C15orf56Q8N910 161 aa8.54□□□□□ -1.04
CLCC1-202ENST00000348264 TMEM242Q9NWH2 141 aa8.54□□□□□ -1.04
CLCC1-202ENST00000348264 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 H7C423 109 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 SLPIP03973 132 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 RAB4AP20338 218 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 PMCHP20382 165 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 SRSF3P84103 164 aaKnown RBP8.53□□□□□ -1.04
CLCC1-202ENST00000348264 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 SDIM1Q6ZPB5 146 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 NUP35Q8NFH5 326 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 ST20Q9HBF5 79 aa8.53□□□□□ -1.04
CLCC1-202ENST00000348264 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
CLCC1-202ENST00000348264 ESDP10768 282 aa8.52□□□□□ -1.05
CLCC1-202ENST00000348264 POLR2KP53803 58 aaKnown RBP8.52□□□□□ -1.05
CLCC1-202ENST00000348264 ADIRFQ15847 76 aa8.52□□□□□ -1.05
CLCC1-202ENST00000348264 FAM74A3Q4VXF1 159 aa8.52□□□□□ -1.05
CLCC1-202ENST00000348264 CHCHD10Q8WYQ3 142 aaPredicted RBP8.52□□□□□ -1.05
CLCC1-202ENST00000348264 MRAP2Q96G30 205 aa8.52□□□□□ -1.05
CLCC1-202ENST00000348264 ZNF25P17030 456 aaPredicted RBP8.51□□□□□ -1.05
CLCC1-202ENST00000348264 RIGQ13278 110 aa8.51□□□□□ -1.05
CLCC1-202ENST00000348264 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
CLCC1-202ENST00000348264 NAT8Q9UHE5 227 aa8.51□□□□□ -1.05
CLCC1-202ENST00000348264 TRBV27A0A0K0K1C4 114 aa8.5□□□□□ -1.05
CLCC1-202ENST00000348264 CIRBPQ14011 172 aaKnown RBP8.5□□□□□ -1.05
CLCC1-202ENST00000348264 HIGD2BQ4VC39 106 aa8.5□□□□□ -1.05
CLCC1-202ENST00000348264 NAT8BQ9UHF3 227 aa8.5□□□□□ -1.05
CLCC1-202ENST00000348264 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
CLCC1-202ENST00000348264 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
CLCC1-202ENST00000348264 J3QL48 77 aa8.49□□□□□ -1.05
CLCC1-202ENST00000348264 CHTF8P0CG12 524 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms