RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 MIAQ16674 131 aa12□□□□□ -0.49
MBD1-204ENST00000347968 CITED2Q99967 270 aaPredicted RBP12□□□□□ -0.49
MBD1-204ENST00000347968 PIEZO1Q92508 2521 aa11.99□□□□□ -0.49
MBD1-204ENST00000347968 IGLV4-3A0A075B6K6 122 aa11.99□□□□□ -0.49
MBD1-204ENST00000347968 RPS28P62857 69 aaKnown RBP11.99□□□□□ -0.49
MBD1-204ENST00000347968 ITPR1Q14643 2758 aa11.99□□□□□ -0.49
MBD1-204ENST00000347968 CREBBPQ92793 2442 aa11.99□□□□□ -0.49
MBD1-204ENST00000347968 DPM3Q9P2X0 92 aa11.99□□□□□ -0.49
MBD1-204ENST00000347968 ACYP1P07311 99 aa11.98□□□□□ -0.49
MBD1-204ENST00000347968 CCDC140Q96MF4 163 aa11.98□□□□□ -0.49
MBD1-204ENST00000347968 CD28P10747 220 aa11.98□□□□□ -0.49
MBD1-204ENST00000347968 RNASE6Q93091 150 aaKnown RBP11.98□□□□□ -0.49
MBD1-204ENST00000347968 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
MBD1-204ENST00000347968 IGHV3-73A0A0B4J1V6 119 aa11.97□□□□□ -0.49
MBD1-204ENST00000347968 ATOX1O00244 68 aa11.97□□□□□ -0.49
MBD1-204ENST00000347968 PPP1R17O96001 155 aa11.97□□□□□ -0.49
MBD1-204ENST00000347968 IGKV3-20P01619 116 aa11.97□□□□□ -0.49
MBD1-204ENST00000347968 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
MBD1-204ENST00000347968 C9orf129Q5T035 196 aaKnown RBP11.97□□□□□ -0.49
MBD1-204ENST00000347968 FAM218AQ96MZ4 157 aa11.97□□□□□ -0.49
MBD1-204ENST00000347968 KLK9Q9UKQ9 250 aa11.97□□□□□ -0.49
MBD1-204ENST00000347968 PKIGQ9Y2B9 76 aa11.97□□□□□ -0.49
MBD1-204ENST00000347968 IGHV7-81A0A0B4J1V7 117 aa11.96□□□□□ -0.5
MBD1-204ENST00000347968 GRNP28799 593 aaKnown RBP11.96□□□□□ -0.5
MBD1-204ENST00000347968 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
MBD1-204ENST00000347968 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
MBD1-204ENST00000347968 A0A087WW49 117 aa11.95□□□□□ -0.5
MBD1-204ENST00000347968 C22orf24Q9Y442 160 aa11.95□□□□□ -0.5
MBD1-204ENST00000347968 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
MBD1-204ENST00000347968 RPL18AQ02543 176 aaKnown RBP11.95□□□□□ -0.5
MBD1-204ENST00000347968 RNF5Q99942 180 aa11.95□□□□□ -0.5
MBD1-204ENST00000347968 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.94□□□□□ -0.52e-7■■■■□ 21.5
MBD1-204ENST00000347968 SPTAN1Q13813 2472 aaKnown RBP11.94□□□□□ -0.5
MBD1-204ENST00000347968 IGHV3OR16-10A0A075B7F0 116 aa11.94□□□□□ -0.5
MBD1-204ENST00000347968 NPBQ8NG41 125 aa11.94□□□□□ -0.5
MBD1-204ENST00000347968 KAAG1Q9UBP8 84 aa11.94□□□□□ -0.5
MBD1-204ENST00000347968 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
MBD1-204ENST00000347968 C20orf203Q8NBC4 194 aa11.94□□□□□ -0.5
MBD1-204ENST00000347968 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
MBD1-204ENST00000347968 C14orf132Q9NPU4 83 aa11.94□□□□□ -0.5
MBD1-204ENST00000347968 TMEM258P61165 79 aa11.93□□□□□ -0.5
MBD1-204ENST00000347968 CDSNQ15517 529 aa11.93□□□□□ -0.5
MBD1-204ENST00000347968 A0A0J9YX75 114 aa11.93□□□□□ -0.5
MBD1-204ENST00000347968 ATP6V0E1O15342 81 aa11.93□□□□□ -0.5
MBD1-204ENST00000347968 LINC01560Q8TB33 94 aa11.93□□□□□ -0.5
MBD1-204ENST00000347968 ATP5G1P05496 136 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 NUP37Q8NFH4 326 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 IGHV1-58A0A0C4DH39 117 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 FHL2Q14192 279 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 UNQ9165/PRO28630Q6UXU0 137 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 TRAV12-2A0A075B6T6 113 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 HIST1H4AP62805 103 aaKnown RBP11.92□□□□□ -0.5
MBD1-204ENST00000347968 LINC00336Q6ZUF6 198 aa11.92□□□□□ -0.5
MBD1-204ENST00000347968 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
MBD1-204ENST00000347968 MAP1AP78559 2803 aaPredicted RBP11.91□□□□□ -0.5
MBD1-204ENST00000347968 COX7A2LO14548 114 aa11.91□□□□□ -0.5
MBD1-204ENST00000347968 HILS1P60008 231 aa11.91□□□□□ -0.5
MBD1-204ENST00000347968 UPK3BQ9BT76 320 aa11.91□□□□□ -0.5
MBD1-204ENST00000347968 Q9UF83 564 aa11.91□□□□□ -0.5
MBD1-204ENST00000347968 TRBV12-3P01733 135 aa11.9□□□□□ -0.5
MBD1-204ENST00000347968 CXCL5P42830 114 aa11.9□□□□□ -0.5
MBD1-204ENST00000347968 SERP2Q8N6R1 65 aa11.9□□□□□ -0.5
MBD1-204ENST00000347968 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
MBD1-204ENST00000347968 J3QLI3 93 aa11.9□□□□□ -0.5
MBD1-204ENST00000347968 M0QY20 66 aa11.9□□□□□ -0.5
MBD1-204ENST00000347968 PROK1P58294 105 aa11.9□□□□□ -0.5
MBD1-204ENST00000347968 ITLN2Q8WWU7 325 aaPredicted RBP11.9□□□□□ -0.5
MBD1-204ENST00000347968 VSIG2Q96IQ7 327 aa11.9□□□□□ -0.5
MBD1-204ENST00000347968 USP17L23D6RBM5 183 aa11.9□□□□□ -0.51
MBD1-204ENST00000347968 CCL21O00585 134 aa11.9□□□□□ -0.51
MBD1-204ENST00000347968 HTN1P15515 57 aa11.89□□□□□ -0.51
MBD1-204ENST00000347968 RPL35AP18077 110 aaKnown RBP11.89□□□□□ -0.51
MBD1-204ENST00000347968 LINC01561Q8N1V8 128 aa11.89□□□□□ -0.51
MBD1-204ENST00000347968 FAM223BA6NKX1 122 aa11.89□□□□□ -0.51
MBD1-204ENST00000347968 E7EQL1 145 aa11.89□□□□□ -0.51
MBD1-204ENST00000347968 DNAL4O96015 105 aa11.89□□□□□ -0.51
MBD1-204ENST00000347968 LINC00846Q9NV44 126 aa11.89□□□□□ -0.51
MBD1-204ENST00000347968 FAM104AQ969W3 186 aa11.88□□□□□ -0.51
MBD1-204ENST00000347968 SOSTDC1Q6X4U4 206 aa11.88□□□□□ -0.51
MBD1-204ENST00000347968 PKD1L2Q7Z442 2459 aa11.88□□□□□ -0.51
MBD1-204ENST00000347968 PFN2P35080 140 aa11.88□□□□□ -0.51
MBD1-204ENST00000347968 C9orf139Q6ZV77 190 aa11.88□□□□□ -0.51
MBD1-204ENST00000347968 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
MBD1-204ENST00000347968 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
MBD1-204ENST00000347968 MRPL53Q96EL3 112 aaKnown RBP11.87□□□□□ -0.51
MBD1-204ENST00000347968 TINCRA0A1B0GVN0 87 aa11.87□□□□□ -0.51
MBD1-204ENST00000347968 EDN2P20800 178 aa11.87□□□□□ -0.51
MBD1-204ENST00000347968 WFDC11Q8NEX6 87 aa11.87□□□□□ -0.51
MBD1-204ENST00000347968 CDKN2A-AS1Q9UH64 79 aa11.87□□□□□ -0.51
MBD1-204ENST00000347968 UCNP55089 124 aa11.86□□□□□ -0.51
MBD1-204ENST00000347968 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
MBD1-204ENST00000347968 HRNRQ86YZ3 2850 aaPredicted RBP11.86□□□□□ -0.51
MBD1-204ENST00000347968 BEAN1Q3B7T3 259 aa11.86□□□□□ -0.51
MBD1-204ENST00000347968 IGHV3-11P01762 117 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 PIK3CD-AS1Q5SR53 167 aa11.85□□□□□ -0.51
MBD1-204ENST00000347968 Q8N9W7 124 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms