RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
ATG4B-201ENST00000344376 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
ATG4B-201ENST00000344376 DNAH5Q8TE73 4624 aa10.71□□□□□ -0.69
ATG4B-201ENST00000344376 NTF3P20783 257 aa10.71□□□□□ -0.69
ATG4B-201ENST00000344376 CHCHD5Q9BSY4 110 aa10.71□□□□□ -0.69
ATG4B-201ENST00000344376 DPH3P1Q9H4G8 78 aa10.71□□□□□ -0.69
ATG4B-201ENST00000344376 NIT2Q9NQR4 276 aa10.71□□□□□ -0.69
ATG4B-201ENST00000344376 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
ATG4B-201ENST00000344376 M0QY20 66 aa10.7□□□□□ -0.7
ATG4B-201ENST00000344376 GCSHP23434 173 aa10.7□□□□□ -0.7
ATG4B-201ENST00000344376 SUMO4Q6EEV6 95 aa10.7□□□□□ -0.7
ATG4B-201ENST00000344376 HSPG2P98160 4391 aa10.7□□□□□ -0.7
ATG4B-201ENST00000344376 GATCO43716 136 aaKnown RBP10.69□□□□□ -0.7
ATG4B-201ENST00000344376 TWIST1Q15672 202 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 OSTCQ9NRP0 149 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 TRBV25-1A0A075B6N4 114 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 IGKV2D-24A0A075B6R9 120 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 CRPP02741 224 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 Q0VG73 95 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 FAM231DQ6ZW35 169 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 SMIM15Q7Z3B0 74 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
ATG4B-201ENST00000344376 IFITM10A6NMD0 228 aa10.67□□□□□ -0.7
ATG4B-201ENST00000344376 A8MWL6 223 aa10.67□□□□□ -0.7
ATG4B-201ENST00000344376 KRTAP10-1P60331 282 aa10.67□□□□□ -0.7
ATG4B-201ENST00000344376 Q8N1X5 172 aa10.67□□□□□ -0.7
ATG4B-201ENST00000344376 KRTAP17-1Q9BYP8 105 aa10.67□□□□□ -0.7
ATG4B-201ENST00000344376 APOBP04114 4563 aaKnown RBP10.66□□□□□ -0.7
ATG4B-201ENST00000344376 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 PHOX2AO14813 284 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BKO60814 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 ANGP03950 147 aaKnown RBP10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BJP06899 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BOP23527 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BBP33778 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BDP58876 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BCP62807 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST2H2BEQ16778 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 MPV17L2Q567V2 206 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 CT83Q5H943 113 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BHQ93079 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BNQ99877 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 HIST1H2BMQ99879 126 aa10.66□□□□□ -0.7
ATG4B-201ENST00000344376 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
ATG4B-201ENST00000344376 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
ATG4B-201ENST00000344376 GTSF1Q8WW33 167 aa10.65□□□□□ -0.7
ATG4B-201ENST00000344376 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
ATG4B-201ENST00000344376 C1orf43Q9BWL3 253 aa10.65□□□□□ -0.7
ATG4B-201ENST00000344376 LECT2O14960 151 aa10.65□□□□□ -0.71
ATG4B-201ENST00000344376 TRGC2P03986 189 aa10.65□□□□□ -0.71
ATG4B-201ENST00000344376 BAALCQ8WXS3 180 aa10.65□□□□□ -0.71
ATG4B-201ENST00000344376 V9GYV3 84 aa10.65□□□□□ -0.71
ATG4B-201ENST00000344376 S100A2P29034 98 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 NDUFA6P56556 154 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 GAGE6Q13070 117 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 WFDC2Q14508 124 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 COX19Q49B96 90 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 HIST3H2BBQ8N257 126 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 Q8N976 141 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 FRZBQ92765 325 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 KRTAP4-5Q9BYR2 181 aa10.64□□□□□ -0.71
ATG4B-201ENST00000344376 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
ATG4B-201ENST00000344376 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
ATG4B-201ENST00000344376 RBX1P62877 108 aa10.62□□□□□ -0.71
ATG4B-201ENST00000344376 MIAQ16674 131 aa10.62□□□□□ -0.71
ATG4B-201ENST00000344376 ENHOQ6UWT2 76 aa10.62□□□□□ -0.71
ATG4B-201ENST00000344376 TMEM243Q9BU79 118 aa10.62□□□□□ -0.71
ATG4B-201ENST00000344376 TMEM70Q9BUB7 260 aa10.62□□□□□ -0.71
ATG4B-201ENST00000344376 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-201ENST00000344376 COTL1Q14019 142 aa10.61□□□□□ -0.71
ATG4B-201ENST00000344376 XGP55808 180 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 GFRA4Q9GZZ7 299 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 ABCA13Q86UQ4 5058 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 SMIM27A0A1W2PRY6 76 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 UBE2L6O14933 153 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-201ENST00000344376 C14orf177Q52M58 125 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 COA6Q5JTJ3 125 aaKnown RBP10.6□□□□□ -0.71
ATG4B-201ENST00000344376 GATD1Q8NB37 220 aa10.6□□□□□ -0.71
ATG4B-201ENST00000344376 FAM231BA6NCW3 169 aa10.59□□□□□ -0.71
ATG4B-201ENST00000344376 HIGD1CA8MV81 97 aa10.59□□□□□ -0.71
ATG4B-201ENST00000344376 EPM2AB3EWF7 344 aa10.59□□□□□ -0.71
ATG4B-201ENST00000344376 MT-ND6P03923 174 aa10.59□□□□□ -0.71
ATG4B-201ENST00000344376 AMTP48728 403 aa10.59□□□□□ -0.71
ATG4B-201ENST00000344376 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
ATG4B-201ENST00000344376 A0A1B0GUT8 65 aa10.58□□□□□ -0.72
ATG4B-201ENST00000344376 CLPSL2Q6UWE3 100 aa10.58□□□□□ -0.72
ATG4B-201ENST00000344376 OR10D4PQ8NGN7 298 aa10.58□□□□□ -0.72
ATG4B-201ENST00000344376 PRR34Q9NV39 138 aa10.58□□□□□ -0.72
ATG4B-201ENST00000344376 HLA-DQA1P01909 254 aa10.57□□□□□ -0.72
ATG4B-201ENST00000344376 A0A1B0GUV1 79 aa10.56□□□□□ -0.72
ATG4B-201ENST00000344376 RPL39LQ96EH5 51 aaKnown RBP10.56□□□□□ -0.72
ATG4B-201ENST00000344376 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
ATG4B-201ENST00000344376 TRAPPC1Q9Y5R8 145 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms