RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 SMIM6P0DI80 62 aa8.83□□□□□ -1
HLA-DQA1-201ENST00000343139 PKIAP61925 76 aa8.83□□□□□ -1
HLA-DQA1-201ENST00000343139 RIGQ13278 110 aa8.83□□□□□ -1
HLA-DQA1-201ENST00000343139 COA6Q5JTJ3 125 aaKnown RBP8.83□□□□□ -1
HLA-DQA1-201ENST00000343139 NIT1Q86X76 327 aa8.83□□□□□ -1
HLA-DQA1-201ENST00000343139 A0A1B0GW15 77 aa8.82□□□□□ -1
HLA-DQA1-201ENST00000343139 MT-ND6P03923 174 aa8.82□□□□□ -1
HLA-DQA1-201ENST00000343139 NDUFA6P56556 154 aa8.82□□□□□ -1
HLA-DQA1-201ENST00000343139 TNP2Q05952 138 aa8.82□□□□□ -1
HLA-DQA1-201ENST00000343139 GATD1Q8NB37 220 aa8.82□□□□□ -1
HLA-DQA1-201ENST00000343139 PKD1P98161 4303 aa8.82□□□□□ -1
HLA-DQA1-201ENST00000343139 IQCJQ1A5X6 159 aa8.81□□□□□ -1
HLA-DQA1-201ENST00000343139 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
HLA-DQA1-201ENST00000343139 GNB1LQ9BYB4 327 aa8.8□□□□□ -1
HLA-DQA1-201ENST00000343139 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
HLA-DQA1-201ENST00000343139 PKHD1P08F94 4074 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 A0A087WX48 190 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 TRAV8-3A0A0A6YYJ7 113 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 IGHV3-30P01768 117 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 IGHV3-33P01772 117 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 IGHV3-30-3P0DP02 117 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 IGHV3-30-5P0DP03 117 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 HIST3H2BBQ8N257 126 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 MRAP2Q96G30 205 aa8.79□□□□□ -1
HLA-DQA1-201ENST00000343139 TRAV26-2A0A0B4J265 109 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 RAB4AP20338 218 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 S100A2P29034 98 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 ATP5L2Q7Z4Y8 100 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 RNF185Q96GF1 192 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 DNAH11Q96DT5 4516 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 IGHV1-24A0A0C4DH33 117 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 PPP1R17O96001 155 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 HLA-DQA1P01909 254 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 C12orf57Q99622 126 aa8.78□□□□□ -1
HLA-DQA1-201ENST00000343139 NCR2O95944 276 aa8.77□□□□□ -1.01
HLA-DQA1-201ENST00000343139 S100A12P80511 92 aa8.77□□□□□ -1.01
HLA-DQA1-201ENST00000343139 Q8N3U1 123 aa8.77□□□□□ -1.01
HLA-DQA1-201ENST00000343139 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
HLA-DQA1-201ENST00000343139 TM2D2Q9BX73 214 aa8.77□□□□□ -1.01
HLA-DQA1-201ENST00000343139 COX11Q9Y6N1 276 aa8.77□□□□□ -1.01
HLA-DQA1-201ENST00000343139 A0A1B0GXF2 115 aa8.76□□□□□ -1.01
HLA-DQA1-201ENST00000343139 HBBP68871 147 aa8.76□□□□□ -1.01
HLA-DQA1-201ENST00000343139 COTL1Q14019 142 aa8.76□□□□□ -1.01
HLA-DQA1-201ENST00000343139 FAM104BQ5XKR9 115 aa8.76□□□□□ -1.01
HLA-DQA1-201ENST00000343139 AMN1Q8IY45 258 aa8.76□□□□□ -1.01
HLA-DQA1-201ENST00000343139 A0A1B0GUV1 79 aa8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 SDHAF1A6NFY7 115 aa8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 IFITM10A6NMD0 228 aa8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 TMEM262E9PQX1 116 aa8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 EREGO14944 169 aa8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 CTAG1AP78358 180 aa8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 Q0VG73 95 aa8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
HLA-DQA1-201ENST00000343139 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
HLA-DQA1-201ENST00000343139 TMEM136Q6ZRR5 245 aa8.74□□□□□ -1.01
HLA-DQA1-201ENST00000343139 RMI2Q96E14 147 aa8.74□□□□□ -1.01
HLA-DQA1-201ENST00000343139 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
HLA-DQA1-201ENST00000343139 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
HLA-DQA1-201ENST00000343139 A0A087WTM6 91 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 H7C423 109 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 I3L3M4 83 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 CAMPP49913 170 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 POLR2KP53803 58 aaKnown RBP8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 TMEM70Q9BUB7 260 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 Q9HAA7 133 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 ST20Q9HBF5 79 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 PSCAO43653 123 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 AMTP48728 403 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 RBX1P62877 108 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 MRPL54Q6P161 138 aaKnown RBP8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
HLA-DQA1-201ENST00000343139 LRCOL1A6NCL2 159 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 PPBPP02775 128 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 ESDP10768 282 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 MRPL51Q4U2R6 128 aaKnown RBP8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 CDPF1Q6NVV7 123 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 NRACQ8N912 160 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 TMEM18Q96B42 140 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 PACRGQ96M98 296 aaPredicted RBP8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
HLA-DQA1-201ENST00000343139 ANGP03950 147 aaKnown RBP8.71□□□□□ -1.02
HLA-DQA1-201ENST00000343139 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
HLA-DQA1-201ENST00000343139 GAGE6Q13070 117 aa8.71□□□□□ -1.02
HLA-DQA1-201ENST00000343139 MIAQ16674 131 aa8.71□□□□□ -1.02
HLA-DQA1-201ENST00000343139 SPATA12Q7Z6I5 190 aa8.71□□□□□ -1.02
HLA-DQA1-201ENST00000343139 UBE2WQ96B02 151 aa8.71□□□□□ -1.02
HLA-DQA1-201ENST00000343139 C20orf78Q9BR46 151 aa8.71□□□□□ -1.02
HLA-DQA1-201ENST00000343139 VCYO14598 125 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 UBE2L6O14933 153 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 CRPP02741 224 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 APCSP02743 223 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 FABP4P15090 132 aa8.7□□□□□ -1.02
HLA-DQA1-201ENST00000343139 PMCHP20382 165 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms