RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 Q9UF83 564 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 TRBV6-5A0A0K0K1A5 114 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 KLLNB2CW77 178 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 PROK1P58294 105 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 UBTD1Q9HAC8 227 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 CD28P10747 220 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
SNX18-202ENST00000343017 H3BT86 120 aa11.23□□□□□ -0.61
SNX18-202ENST00000343017 LST1O00453 97 aa11.23□□□□□ -0.61
SNX18-202ENST00000343017 ID1P41134 155 aa11.23□□□□□ -0.61
SNX18-202ENST00000343017 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
SNX18-202ENST00000343017 CUBNO60494 3623 aa11.23□□□□□ -0.61
SNX18-202ENST00000343017 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
SNX18-202ENST00000343017 SMCR5Q8TEV8 140 aa11.22□□□□□ -0.61
SNX18-202ENST00000343017 IGHV3-16A0A0C4DH30 117 aa11.22□□□□□ -0.61
SNX18-202ENST00000343017 A0A0J9YX75 114 aa11.22□□□□□ -0.61
SNX18-202ENST00000343017 LOC107984640A0A0U1RRK4 108 aa11.22□□□□□ -0.61
SNX18-202ENST00000343017 LINC00694P0DN24 101 aa11.22□□□□□ -0.61
SNX18-202ENST00000343017 HTN1P15515 57 aa11.22□□□□□ -0.61
SNX18-202ENST00000343017 RHOHQ15669 191 aa11.21□□□□□ -0.61
SNX18-202ENST00000343017 ABCA12Q86UK0 2595 aa11.21□□□□□ -0.61
SNX18-202ENST00000343017 NACAE9PAV3 2078 aa11.21□□□□□ -0.62
SNX18-202ENST00000343017 A0A1W2PPR1 153 aa11.21□□□□□ -0.62
SNX18-202ENST00000343017 NDUFA4O00483 81 aa11.21□□□□□ -0.62
SNX18-202ENST00000343017 TMEM61Q8N0U2 210 aa11.21□□□□□ -0.62
SNX18-202ENST00000343017 CSPG4Q6UVK1 2322 aa11.21□□□□□ -0.62
SNX18-202ENST00000343017 LY6EQ16553 131 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 MIAQ16674 131 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 ZNF625Q96I27 306 aaPredicted RBP11.2□□□□□ -0.62
SNX18-202ENST00000343017 DOPEY2Q9Y3R5 2298 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 PRM2P04554 102 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 BRD3OSQ6XYD6 125 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 USP24Q9UPU5 2620 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 TRBV7-7A0A0K0K1E9 115 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 PF4V1P10720 104 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
SNX18-202ENST00000343017 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
SNX18-202ENST00000343017 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
SNX18-202ENST00000343017 C9orf85Q96MD7 179 aa11.19□□□□□ -0.62
SNX18-202ENST00000343017 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 NPFFO15130 113 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 MRPL23Q16540 153 aaKnown RBP11.18□□□□□ -0.62
SNX18-202ENST00000343017 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 PTPN13Q12923 2485 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 DEFB121Q5J5C9 76 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 C9orf153Q5TBE3 101 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 CITED2Q99967 270 aaPredicted RBP11.18□□□□□ -0.62
SNX18-202ENST00000343017 CELSR2Q9HCU4 2923 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
SNX18-202ENST00000343017 FAM240AA0A1B0GVK7 77 aa11.17□□□□□ -0.62
SNX18-202ENST00000343017 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
SNX18-202ENST00000343017 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
SNX18-202ENST00000343017 IGHG2P01859 326 aa11.17□□□□□ -0.62
SNX18-202ENST00000343017 MRPS36P82909 103 aaKnown RBP11.17□□□□□ -0.62
SNX18-202ENST00000343017 C11orf71Q6IPW1 123 aa11.17□□□□□ -0.62
SNX18-202ENST00000343017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
SNX18-202ENST00000343017 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
SNX18-202ENST00000343017 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
SNX18-202ENST00000343017 FBXL19-AS1Q494R0 122 aa11.16□□□□□ -0.62
SNX18-202ENST00000343017 Q8N2B8 174 aa11.16□□□□□ -0.62
SNX18-202ENST00000343017 TMEM126AQ9H061 195 aa11.16□□□□□ -0.62
SNX18-202ENST00000343017 YAE1D1Q9NRH1 226 aa11.16□□□□□ -0.62
SNX18-202ENST00000343017 DOPEY1Q5JWR5 2465 aa11.16□□□□□ -0.62
SNX18-202ENST00000343017 CSMD2Q7Z408 3487 aa11.15□□□□□ -0.62
SNX18-202ENST00000343017 PRORYQ9H606 182 aa11.15□□□□□ -0.62
SNX18-202ENST00000343017 C2CD3Q4AC94 2353 aa11.15□□□□□ -0.62
SNX18-202ENST00000343017 TLN2Q9Y4G6 2542 aa11.15□□□□□ -0.62
SNX18-202ENST00000343017 BLCAPP62952 87 aa11.15□□□□□ -0.63
SNX18-202ENST00000343017 DCANP1Q8TF63 244 aa11.15□□□□□ -0.63
SNX18-202ENST00000343017 IGHV3-38A0A0C4DH36 116 aa11.14□□□□□ -0.63
SNX18-202ENST00000343017 RS1O15537 224 aa11.14□□□□□ -0.63
SNX18-202ENST00000343017 MOB4Q9Y3A3 225 aa11.14□□□□□ -0.63
SNX18-202ENST00000343017 PRB1P04280 392 aa11.14□□□□□ -0.63
SNX18-202ENST00000343017 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
SNX18-202ENST00000343017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.13□□□□□ -0.63
SNX18-202ENST00000343017 DAZ1Q9NQZ3 744 aaKnown RBP11.13□□□□□ -0.63
SNX18-202ENST00000343017 IGHV1OR15-1A0A075B7D0 117 aa11.13□□□□□ -0.63
SNX18-202ENST00000343017 HERVK_113P63121 156 aa11.13□□□□□ -0.63
SNX18-202ENST00000343017 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
SNX18-202ENST00000343017 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
SNX18-202ENST00000343017 C3orf22Q8N5N4 141 aa11.12□□□□□ -0.63
SNX18-202ENST00000343017 BPESC1Q9GZL8 116 aa11.12□□□□□ -0.63
SNX18-202ENST00000343017 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
SNX18-202ENST00000343017 NDUFA7O95182 113 aa11.12□□□□□ -0.63
SNX18-202ENST00000343017 Q6ZSN1 163 aa11.12□□□□□ -0.63
SNX18-202ENST00000343017 CCDC168Q8NDH2 2452 aa11.11□□□□□ -0.63
SNX18-202ENST00000343017 SPANXA1Q9NS26 97 aa11.11□□□□□ -0.63
SNX18-202ENST00000343017 ABCA2Q9BZC7 2435 aa11.1□□□□□ -0.63
SNX18-202ENST00000343017 LMO4P61968 165 aa11.1□□□□□ -0.63
SNX18-202ENST00000343017 COX6A2Q02221 97 aa11.09□□□□□ -0.63
SNX18-202ENST00000343017 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
SNX18-202ENST00000343017 NOTCH3Q9UM47 2321 aa11.09□□□□□ -0.63
SNX18-202ENST00000343017 NAV2Q8IVL1 2488 aa11.09□□□□□ -0.63
SNX18-202ENST00000343017 BAALC-AS2P0C853 105 aa11.09□□□□□ -0.63
SNX18-202ENST00000343017 ATP5J2P56134 94 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 264.2 ms