RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 DAZ3Q9NR90 486 aaKnown RBP5.38□□□□□ -1.55
VCAN-202ENST00000342785 IGHV4-4A0A075B6R2 117 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 CENPEQ02224 2701 aa5.38□□□□□ -1.55
VCAN-202ENST00000342785 RBX1P62877 108 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 LAMA3Q16787 3333 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 LGALS9O00182 355 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 ZNF22P17026 224 aaPredicted RBP5.37□□□□□ -1.55
VCAN-202ENST00000342785 Q6ZUT4 128 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 ATP6V0E2Q8NHE4 81 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 CITED2Q99967 270 aaPredicted RBP5.37□□□□□ -1.55
VCAN-202ENST00000342785 ICOSQ9Y6W8 199 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 TRBV27A0A0K0K1C4 114 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 BAALC-AS2P0C853 105 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 SND1-IT1Q9HBX3 110 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 COL5A1P20908 1838 aaPredicted RBP5.37□□□□□ -1.55
VCAN-202ENST00000342785 KLLNB2CW77 178 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 GYPEP15421 78 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 POLR2KP53803 58 aaKnown RBP5.37□□□□□ -1.55
VCAN-202ENST00000342785 C16orf74Q96GX8 76 aa5.37□□□□□ -1.55
VCAN-202ENST00000342785 A0A096LNJ9 63 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 TRBV10-1A0A0K0K1A3 114 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 ZNF561-AS1K7EIQ3 104 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 Q6ZTI0 123 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 C4orf3Q8WVX3 66 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 IGLV4-3A0A075B6K6 122 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 A0A0J9YXY3 114 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 AVPP01185 164 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 APOC4P55056 127 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 HHLA3Q9XRX5 114 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 PSMB8P28062 276 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 Q6YL49 198 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 DEFB114Q30KQ6 69 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 ESM1Q9NQ30 184 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 TRBV6-5A0A0K0K1A5 114 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 EXPH5Q8NEV8 1989 aa5.36□□□□□ -1.55
VCAN-202ENST00000342785 TRAV4A0A0B4J268 109 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 COX8CQ7Z4L0 72 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 TCL1BO95988 128 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 IGLV10-54A0A075B6I4 117 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 TINCRA0A1B0GVN0 87 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 C3orf56Q8N813 242 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 CRYGDP07320 174 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 RPL32P62910 135 aaKnown RBP5.35□□□□□ -1.55
VCAN-202ENST00000342785 TMEM263Q8WUH6 116 aaKnown RBP5.35□□□□□ -1.55
VCAN-202ENST00000342785 CLEC2BQ92478 149 aa5.35□□□□□ -1.55
VCAN-202ENST00000342785 BRCA2P51587 3418 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 PROK1P58294 105 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 MKI67P46013 3256 aaKnown RBP5.34□□□□□ -1.55
VCAN-202ENST00000342785 WFDC11Q8NEX6 87 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 DCANP1Q8TF63 244 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 EDA2RQ9HAV5 297 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 TRBV10-2A0A0K0K1G8 114 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 CRYBA4P53673 196 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 DEFB121Q5J5C9 76 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 HIST2H2BCQ6DN03 193 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 DNAJC9-AS1A6NH13 148 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 H3BT86 120 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 CRLF1O75462 422 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 LINC00467Q9BRT7 94 aa5.34□□□□□ -1.55
VCAN-202ENST00000342785 SPANXB1Q9NS25 103 aaPredicted RBP5.34□□□□□ -1.55
VCAN-202ENST00000342785 ZMAT4Q9H898 229 aa5.34□□□□□ -1.56
VCAN-202ENST00000342785 C9orf153Q5TBE3 101 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 MIR7-3HGQ8N6C7 128 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 H0YGX0 51 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 RS1O15537 224 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 ATP5G1P05496 136 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 NFE4Q86UQ8 179 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 Q6ZSV7 163 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 TMEM223A0PJW6 202 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 MIAQ16674 131 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 UBL5Q9BZL1 73 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 HAMPP81172 84 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 A0A0B4J2C4 111 aa5.33□□□□□ -1.56
VCAN-202ENST00000342785 B5MCH6 92 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 PRM2P04554 102 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 C9orf85Q96MD7 179 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 CFAP126Q5VTH2 177 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 DEFB4AO15263 64 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 TSHBP01222 138 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 IGHV3-33P01772 117 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 MRPL23Q16540 153 aaKnown RBP5.32□□□□□ -1.56
VCAN-202ENST00000342785 PSMG3-AS1Q96PY0 264 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 EDN2P20800 178 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 DEFB135Q30KP9 77 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 TRANK1O15050 2925 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 HIST2H2BDQ6DRA6 164 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 ZNF702PQ9H963 129 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 PYGO1Q9Y3Y4 419 aa5.32□□□□□ -1.56
VCAN-202ENST00000342785 ANKRD17O75179 2603 aaKnown RBP5.31□□□□□ -1.56
VCAN-202ENST00000342785 COX7A2LO14548 114 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 A8MZ25 164 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 ACYP1P07311 99 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 CRIP2P52943 208 aaPredicted RBP5.31□□□□□ -1.56
VCAN-202ENST00000342785 LAMA2P24043 3122 aaKnown RBP5.31□□□□□ -1.56
VCAN-202ENST00000342785 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
VCAN-202ENST00000342785 LECT2O14960 151 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms