RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 FAM231AP0DMU4 169 aa7.03□□□□□ -1.28
TRERF1-201ENST00000340840 FAM231CP0DMU5 169 aa7.03□□□□□ -1.28
TRERF1-201ENST00000340840 C11orf44Q8N8P7 122 aa7.03□□□□□ -1.28
TRERF1-201ENST00000340840 SPANXA1Q9NS26 97 aa7.03□□□□□ -1.28
TRERF1-201ENST00000340840 TRBV10-2A0A0K0K1G8 114 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 IGLV4-3A0A075B6K6 122 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 GATA3P23771 443 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 SMCPP49901 116 aaPredicted RBP7.02□□□□□ -1.29
TRERF1-201ENST00000340840 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
TRERF1-201ENST00000340840 C9orf85Q96MD7 179 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE5Q13069 117 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE6Q13070 117 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 C19orf54Q5BKX5 351 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 C10orf105Q8TEF2 133 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 PEMTQ9UBM1 199 aa7.02□□□□□ -1.29
TRERF1-201ENST00000340840 IGHV3OR16-12A0A075B7B8 117 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 BRI3O95415 125 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 LINC00315P59091 139 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 IGSF10Q6WRI0 2623 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 MAST4O15021 2626 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 MAP1AP78559 2803 aaPredicted RBP7.01□□□□□ -1.29
TRERF1-201ENST00000340840 IGHV4-30-2A0A087WSY4 118 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 TRAV8-3A0A0A6YYJ7 113 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 IFITM1P13164 125 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 C15orf53Q8NAA6 179 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 FAM19A4Q96LR4 140 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 ICOSQ9Y6W8 199 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 IGHV1-58A0A0C4DH39 117 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 A0A0U1RRA0 63 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 K7EQG2 157 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 DCANP1Q8TF63 244 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 WDFY3Q8IZQ1 3526 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 POM121L12Q8N7R1 296 aa7.01□□□□□ -1.29
TRERF1-201ENST00000340840 IGHV4-59P01825 116 aa7□□□□□ -1.29
TRERF1-201ENST00000340840 RNF183Q96D59 192 aa7□□□□□ -1.29
TRERF1-201ENST00000340840 H3BT86 120 aa7□□□□□ -1.29
TRERF1-201ENST00000340840 IGLV1-40P01703 118 aa7□□□□□ -1.29
TRERF1-201ENST00000340840 ELANEP08246 267 aa7□□□□□ -1.29
TRERF1-201ENST00000340840 TMEM263Q8WUH6 116 aaKnown RBP7□□□□□ -1.29
TRERF1-201ENST00000340840 UBE2L6O14933 153 aa7□□□□□ -1.29
TRERF1-201ENST00000340840 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
TRERF1-201ENST00000340840 TRBV30A0A0K0K1B3 111 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 TMEM89A2RUT3 159 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE12JA6NER3 117 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE7O76087 117 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE12FP0CL80 117 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE12GP0CL81 117 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE12IP0CL82 117 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 GAGE4Q13068 117 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 ANKRD17O75179 2603 aaKnown RBP6.99□□□□□ -1.29
TRERF1-201ENST00000340840 HOXD3P31249 432 aaPredicted RBP6.99□□□□□ -1.29
TRERF1-201ENST00000340840 PYGO1Q9Y3Y4 419 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
TRERF1-201ENST00000340840 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
TRERF1-201ENST00000340840 INAFM1C9JVW0 142 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 INSP01308 110 aa6.99□□□□□ -1.29
TRERF1-201ENST00000340840 IGHV3-38A0A0C4DH36 116 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 B5MCH6 92 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 MIAQ16674 131 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 DEFB112Q30KQ8 113 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 TMEM101Q96IK0 257 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 ATMQ13315 3056 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 RPL36AP83881 106 aaKnown RBP6.98□□□□□ -1.29
TRERF1-201ENST00000340840 PRIMA1Q86XR5 153 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 RPL36ALQ969Q0 106 aaKnown RBP6.98□□□□□ -1.29
TRERF1-201ENST00000340840 TRIAP1O43715 76 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 PF4P02776 101 aa6.98□□□□□ -1.29
TRERF1-201ENST00000340840 CEMP1Q6PRD7 247 aaPredicted RBP6.98□□□□□ -1.29
TRERF1-201ENST00000340840 ZNF625Q96I27 306 aaPredicted RBP6.98□□□□□ -1.29
TRERF1-201ENST00000340840 DNAL4O96015 105 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 DNAJC30Q96LL9 226 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 TEX49A0A1B0GTD5 131 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 HERVK_113P63121 156 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 ZZEF1O43149 2961 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 ASPMQ8IZT6 3477 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 TRAV13-1A0A0B4J241 112 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
TRERF1-201ENST00000340840 M0QXV9 152 aa6.96□□□□□ -1.29
TRERF1-201ENST00000340840 EDN2P20800 178 aa6.96□□□□□ -1.29
TRERF1-201ENST00000340840 SBSPONQ8IVN8 264 aa6.96□□□□□ -1.29
TRERF1-201ENST00000340840 VSIG2Q96IQ7 327 aa6.96□□□□□ -1.29
TRERF1-201ENST00000340840 NACAE9PAV3 2078 aa6.96□□□□□ -1.29
TRERF1-201ENST00000340840 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.3
TRERF1-201ENST00000340840 PSMB8P28062 276 aa6.96□□□□□ -1.3
TRERF1-201ENST00000340840 STHQ8IWL8 128 aa6.96□□□□□ -1.3
TRERF1-201ENST00000340840 CLEC2BQ92478 149 aa6.96□□□□□ -1.3
TRERF1-201ENST00000340840 Q9H8V8 135 aa6.96□□□□□ -1.3
TRERF1-201ENST00000340840 SS18L2Q9UHA2 77 aa6.96□□□□□ -1.3
TRERF1-201ENST00000340840 GCN1Q92616 2671 aaKnown RBP6.95□□□□□ -1.3
TRERF1-201ENST00000340840 MRPS36P82909 103 aaKnown RBP6.95□□□□□ -1.3
TRERF1-201ENST00000340840 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
TRERF1-201ENST00000340840 UBE2E2Q96LR5 201 aa6.95□□□□□ -1.3
TRERF1-201ENST00000340840 SMR3AQ99954 134 aa6.95□□□□□ -1.3
TRERF1-201ENST00000340840 SPANXDQ9BXN6 97 aa6.95□□□□□ -1.3
TRERF1-201ENST00000340840 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
TRERF1-201ENST00000340840 KALRNO60229 2985 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms