RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 I3L3M4 83 aa10.18□□□□□ -0.78
UBE3B-201ENST00000340074 ANGP03950 147 aaKnown RBP10.18□□□□□ -0.78
UBE3B-201ENST00000340074 RBX1P62877 108 aa10.18□□□□□ -0.78
UBE3B-201ENST00000340074 NRACQ8N912 160 aa10.18□□□□□ -0.78
UBE3B-201ENST00000340074 UBE2WQ96B02 151 aa10.18□□□□□ -0.78
UBE3B-201ENST00000340074 TMEM70Q9BUB7 260 aa10.18□□□□□ -0.78
UBE3B-201ENST00000340074 A0A087WTM6 91 aa10.17□□□□□ -0.78
UBE3B-201ENST00000340074 PMCHP20382 165 aa10.17□□□□□ -0.78
UBE3B-201ENST00000340074 C10orf91Q5T1B1 145 aa10.17□□□□□ -0.78
UBE3B-201ENST00000340074 SPATA12Q7Z6I5 190 aa10.17□□□□□ -0.78
UBE3B-201ENST00000340074 UBE2L6O14933 153 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 CKS2P33552 79 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
UBE3B-201ENST00000340074 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 TM2D2Q9BX73 214 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 CTDSP1Q9GZU7 261 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 EREGO14944 169 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 PPP1R17O96001 155 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 APCSP02743 223 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 Q0VG73 95 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 ENHOQ6UWT2 76 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
UBE3B-201ENST00000340074 CARHSP1Q9Y2V2 147 aaKnown RBP10.16□□□□□ -0.78
UBE3B-201ENST00000340074 IGKV2D-24A0A075B6R9 120 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 TRBV27A0A0K0K1C4 114 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 D6R8Y8 96 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 TSHBP01222 138 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 CRPP02741 224 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 SUMO2P61956 95 aaKnown RBP10.15□□□□□ -0.79
UBE3B-201ENST00000340074 CLPSL2Q6UWE3 100 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 LINC00269Q8N2A0 174 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 RMI2Q96E14 147 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 BTF3L4Q96K17 158 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 TMEM242Q9NWH2 141 aa10.15□□□□□ -0.79
UBE3B-201ENST00000340074 DYNC1H1Q14204 4646 aaKnown RBP10.14□□□□□ -0.79
UBE3B-201ENST00000340074 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
UBE3B-201ENST00000340074 A0A1B0GUV1 79 aa10.14□□□□□ -0.79
UBE3B-201ENST00000340074 LRCOL1A6NCL2 159 aa10.14□□□□□ -0.79
UBE3B-201ENST00000340074 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
UBE3B-201ENST00000340074 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
UBE3B-201ENST00000340074 TRBV24-1A0A075B6N3 115 aa10.13□□□□□ -0.79
UBE3B-201ENST00000340074 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.13□□□□□ -0.79
UBE3B-201ENST00000340074 IGKV2-29A2NJV5 120 aaPredicted RBP10.13□□□□□ -0.79
UBE3B-201ENST00000340074 C7orf77A4D0Y5 90 aa10.13□□□□□ -0.79
UBE3B-201ENST00000340074 C16orf90A8MZG2 172 aa10.13□□□□□ -0.79
UBE3B-201ENST00000340074 VCYO14598 125 aa10.13□□□□□ -0.79
UBE3B-201ENST00000340074 TNFRSF6BO95407 300 aa10.13□□□□□ -0.79
UBE3B-201ENST00000340074 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
UBE3B-201ENST00000340074 PRR34Q9NV39 138 aa10.13□□□□□ -0.79
UBE3B-201ENST00000340074 COX11Q9Y6N1 276 aa10.13□□□□□ -0.79
UBE3B-201ENST00000340074 CLRN3Q8NCR9 226 aa10.12□□□□□ -0.79
UBE3B-201ENST00000340074 C20orf78Q9BR46 151 aa10.12□□□□□ -0.79
UBE3B-201ENST00000340074 H7C423 109 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 NPYP01303 97 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 PPBPP02775 128 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 ESDP10768 282 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 RHEBQ15382 184 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 MIAQ16674 131 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 ORMDL3Q8N138 153 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 C1orf43Q9BWL3 253 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 DNAH5Q8TE73 4624 aa10.11□□□□□ -0.79
UBE3B-201ENST00000340074 LECT2O14960 151 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 FCER1GP30273 86 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 REG3AQ06141 175 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 WFDC2Q14508 124 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 AMMECR1LQ6DCA0 310 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 RNASEKQ6P5S7 137 aaKnown RBP10.1□□□□□ -0.79
UBE3B-201ENST00000340074 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 BAALCQ8WXS3 180 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 RPS10P5Q9NQ39 176 aa10.1□□□□□ -0.79
UBE3B-201ENST00000340074 FGF6P10767 208 aa10.09□□□□□ -0.79
UBE3B-201ENST00000340074 S100PP25815 95 aa10.09□□□□□ -0.79
UBE3B-201ENST00000340074 Q8N814 137 aa10.09□□□□□ -0.79
UBE3B-201ENST00000340074 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
UBE3B-201ENST00000340074 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
UBE3B-201ENST00000340074 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
UBE3B-201ENST00000340074 PHOX2AO14813 284 aa10.08□□□□□ -0.8
UBE3B-201ENST00000340074 APOC3P02656 99 aa10.08□□□□□ -0.8
UBE3B-201ENST00000340074 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
UBE3B-201ENST00000340074 PRELID3AQ96N28 172 aa10.08□□□□□ -0.8
UBE3B-201ENST00000340074 SMIM2Q9BVW6 85 aa10.08□□□□□ -0.8
UBE3B-201ENST00000340074 IGLV10-54A0A075B6I4 117 aa10.07□□□□□ -0.8
UBE3B-201ENST00000340074 LRP1BQ9NZR2 4599 aa10.07□□□□□ -0.8
UBE3B-201ENST00000340074 HLA-DQA1P01909 254 aa10.07□□□□□ -0.8
UBE3B-201ENST00000340074 ZNF25P17030 456 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-201ENST00000340074 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
UBE3B-201ENST00000340074 CDPF1Q6NVV7 123 aa10.07□□□□□ -0.8
UBE3B-201ENST00000340074 TRAV8-4A0A0B4J246 113 aa10.06□□□□□ -0.8
UBE3B-201ENST00000340074 KRTAP26-1Q6PEX3 210 aa10.06□□□□□ -0.8
UBE3B-201ENST00000340074 SVBPQ8N300 66 aa10.06□□□□□ -0.8
UBE3B-201ENST00000340074 IGKV3OR2-268A0A0C4DH90 116 aa10.05□□□□□ -0.8
UBE3B-201ENST00000340074 SNAPINO95295 136 aa10.05□□□□□ -0.8
UBE3B-201ENST00000340074 MRPL52Q86TS9 123 aaKnown RBP10.05□□□□□ -0.8
UBE3B-201ENST00000340074 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
UBE3B-201ENST00000340074 LAMTOR2Q9Y2Q5 125 aa10.05□□□□□ -0.8
UBE3B-201ENST00000340074 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
UBE3B-201ENST00000340074 LOC389332A0A1B0GUA5 103 aa10.04□□□□□ -0.8
UBE3B-201ENST00000340074 TCAPO15273 167 aa10.04□□□□□ -0.8
UBE3B-201ENST00000340074 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
UBE3B-201ENST00000340074 NTN5Q8WTR8 489 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms