RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NDUFC2O95298 119 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 FANCD2OSQ96PS1 177 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 MED13LQ71F56 2210 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 SDHAF1A6NFY7 115 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 KNCNA6PVL3 124 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 COX7A2LO14548 114 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 GNRH2O43555 120 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 TIMM17BO60830 172 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 FAM229BQ4G0N7 80 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 FAM74A4Q5TZK3 123 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 PSMB8P28062 276 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 BEAN1Q3B7T3 259 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 IGFL2Q6UWQ7 119 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 MUC4Q99102 2169 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 CD59P13987 128 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 SORL1Q92673 2214 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 PIEZO1Q92508 2521 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 AKAP13Q12802 2813 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 CEP295Q9C0D2 2601 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 LY6G6EA0A0G2JKS1 128 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 Q6JHZ5 121 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 SLC25A15Q9Y619 301 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 U3KQA8 63 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 NCR3O14931 201 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHG2P01859 326 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 TMEM141Q96I45 108 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 SPTBN1Q01082 2364 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHV1-69DA0A0B4J2H0 117 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHV1-18A0A0C4DH31 117 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 F8WEM9 126 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 INAFM2P0DMQ5 153 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 TIMM17AQ99595 171 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 F8W735 103 aaPredicted RBP7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 SNRPD3P62318 126 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 VMO1Q7Z5L0 202 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 APC2O95996 2303 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHV4-4A0A075B6R2 117 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 RPL11P62913 178 aaKnown RBP7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 TRBV27A0A0K0K1C4 114 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 IGKV3-15P01624 115 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 TMEM190Q8WZ59 177 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 SPRR3Q9UBC9 169 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
PTCHD4-201ENST00000339488 COX7A1P24310 79 aa7.08□□□□□ -1.28
PTCHD4-201ENST00000339488 DKK4Q9UBT3 224 aa7.08□□□□□ -1.28
PTCHD4-201ENST00000339488 CUBNO60494 3623 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 A0A0J9YX75 114 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 SLPIP03973 132 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 CCKP06307 115 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 POLR2KP53803 58 aaKnown RBP7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 A0A087WYN8 130 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 NDUFC2-KCTD14E9PQ53 114 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 PMAIP1Q13794 54 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 ZFAND3Q9H8U3 227 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 IGLV4-3A0A075B6K6 122 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 A0A087WZ39 114 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 M0R1B8 84 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 LINC00574Q9H8X3 128 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 KLK9Q9UKQ9 250 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 C20orf173Q96LM9 149 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 DOPEY2Q9Y3R5 2298 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 VCYO14598 125 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 RNASE4P34096 147 aaKnown RBP7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 LINC00315P59091 139 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 COL12A1Q99715 3063 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 F6UB75 175 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 CD28P10747 220 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 IGKV3-7A0A075B6H7 116 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 RNASE3P12724 160 aaKnown RBP7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 LINC00308Q8TCZ7 52 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 IGHV1-3A0A0C4DH29 117 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 IGHV1-58A0A0C4DH39 117 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 TMEM89A2RUT3 159 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 IGHV1-46P01743 117 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 PIK3CD-AS1Q5SR53 167 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 U3KQE9 123 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 COL27A1Q8IZC6 1860 aaPredicted RBP7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 MOB4Q9Y3A3 225 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 ASH1LQ9NR48 2969 aaKnown RBP7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 NCOR2Q9Y618 2525 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 CTSGP08311 255 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 VSIG2Q96IQ7 327 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 CHD8Q9HCK8 2581 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 KIF25-AS1Q9Y6Z4 181 aa7.02□□□□□ -1.28
PTCHD4-201ENST00000339488 DEFB124Q8NES8 71 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 TRAV10A0A0B4J240 114 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 PAX4O43316 350 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 IGHV1-69P01742 117 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms