RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 FAM104AQ969W3 186 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 FAM110AQ9BQ89 295 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 SPXQ9BT56 116 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 DEFB4AO15263 64 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 RS1O15537 224 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 MRPS16Q9Y3D3 137 aaKnown RBP5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 CHTOPQ9Y3Y2 248 aaKnown RBP5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 TNFRSF18Q9Y5U5 241 aa5.29□□□□□ -1.56
SRFBP1-201ENST00000339397 LOC100131303A0A0U1RQF7 123 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 F8VRH5 84 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 H7C1H1 209 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 COL5A1-AS1Q5SY13 56 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 SLC25A29Q8N8R3 303 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 PGPEP1Q9NXJ5 209 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 TENM3Q9P273 2699 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 TRAV8-6A0A0B4J262 113 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 K7EMI3 77 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 BOD1L2Q8IYS8 172 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 C20orf203Q8NBC4 194 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 ZNRF2Q8NHG8 242 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 CST9LQ9H4G1 147 aa5.28□□□□□ -1.56
SRFBP1-201ENST00000339397 IGLV4-69A0A075B6H9 119 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 C11orf86A6NJI1 115 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 RRN3P1Q2M238 152 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 TRGV2A0A075B6R0 118 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 TRAV12-1A0A0B4J245 112 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 K7EP13 123 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 CMC4P56277 68 aaPredicted RBP5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 C9orf66Q5T8R8 295 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 PRIMA1Q86XR5 153 aa5.27□□□□□ -1.57
SRFBP1-201ENST00000339397 DEFB130BP0DP73 79 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 DEFB130AP0DP74 79 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 DEFB135Q30KP9 77 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 PIK3CD-AS1Q5SR53 167 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 PTH2Q96A98 100 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 CHCHD7Q9BUK0 85 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 J3QL48 77 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 NPSP0C0P6 89 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 DAZ2Q13117 558 aaKnown RBP5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 BVES-AS1Q5T3Y7 98 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 IGLV4-3A0A075B6K6 122 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 GAGE12JA6NER3 117 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 GAGE4Q13068 117 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 GAGE5Q13069 117 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 PMVKQ15126 192 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 GAGE13Q4V321 117 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 C16orf74Q96GX8 76 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 C1QTNF4Q9BXJ3 329 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 EDA2RQ9HAV5 297 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 X6R8D5 127 aa5.26□□□□□ -1.57
SRFBP1-201ENST00000339397 MGAM2Q2M2H8 2515 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 LINC00694P0DN24 101 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 PLNP26678 52 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 INSL3P51460 131 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 RHOHQ15669 191 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 NTM-AS1Q6ZSK4 140 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 WFDC9Q8NEX5 89 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 TIMM17AQ99595 171 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 TRBV7-3A0A075B6L6 115 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 TRBV25-1A0A075B6N4 114 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 IGHV3-64A0A075B6Q5 118 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 RHODO00212 210 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 CDIP1Q9H305 208 aa5.25□□□□□ -1.57
SRFBP1-201ENST00000339397 TRAV4A0A0B4J268 109 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 A0A0J9YXV3 536 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 ZNF561-AS1K7EIQ3 104 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 OVOL2Q9BRP0 275 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 CBY1Q9Y3M2 126 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 K7EQD1 137 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 KRTAP10-11P60412 298 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 TMEM170BQ5T4T1 132 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 TMEM141Q96I45 108 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 PRADC1Q9BSG0 188 aa5.24□□□□□ -1.57
SRFBP1-201ENST00000339397 TSPEAR-AS2P59090 65 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 FHL2Q14192 279 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 UBE2D4Q9Y2X8 147 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 IGHV4-30-4P0DP06 118 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 COTL1Q14019 142 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 TMEM97Q5BJF2 176 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 Q6ZUT4 128 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 VCX2Q9H322 139 aa5.23□□□□□ -1.57
SRFBP1-201ENST00000339397 TRGV4A0A0C4DH28 118 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 ORAOV1Q8WV07 137 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 A0A096LPF7 62 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 A8MZ25 164 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 UBE2D3P61077 147 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 UBE2D2P62837 147 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 C3orf56Q8N813 242 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 OR11H2Q8NH07 326 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 PLEKHB2Q96CS7 222 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 NAA38Q9BRA0 125 aaKnown RBP5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 CHAC1Q9BUX1 264 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 FXYD2P54710 66 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 RPL36AP83881 106 aaKnown RBP5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 KRTAP21-3Q3LHN1 58 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 FAM222AQ5U5X8 452 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 C12orf54Q6X4T0 127 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 RPL36ALQ969Q0 106 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms