RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
RPGR-202ENST00000339363 RBMY1BA6NDE4 496 aaKnown RBP6.97□□□□□ -1.29
RPGR-202ENST00000339363 RBMY1EA6NEQ0 496 aaKnown RBP6.97□□□□□ -1.29
RPGR-202ENST00000339363 RBMY1DP0C7P1 496 aaKnown RBP6.97□□□□□ -1.29
RPGR-202ENST00000339363 RBMY1A1P0DJD3 496 aaKnown RBP6.97□□□□□ -1.29
RPGR-202ENST00000339363 RBMY1CP0DJD4 496 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 TIRAPP58753 221 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 DEFB1P60022 68 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 RBMY1FQ15415 496 aaKnown RBP6.97□□□□□ -1.29
RPGR-202ENST00000339363 CLEC19AQ6UXS0 136 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 USP17L23D6RBM5 183 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 E7EQL1 145 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 SPG11Q96JI7 2443 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 BUB1B-PAK6H3BSN5 160 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 RNASE1P07998 156 aaKnown RBP6.97□□□□□ -1.29
RPGR-202ENST00000339363 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 CDSNQ15517 529 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 ZNF876PQ49A33 203 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 TIMM17AQ99595 171 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 NCOR2Q9Y618 2525 aa6.97□□□□□ -1.29
RPGR-202ENST00000339363 MUC6Q6W4X9 2439 aa6.96□□□□□ -1.29
RPGR-202ENST00000339363 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.29
RPGR-202ENST00000339363 MALP21145 153 aa6.96□□□□□ -1.29
RPGR-202ENST00000339363 CXCL5P42830 114 aa6.96□□□□□ -1.29
RPGR-202ENST00000339363 A8MZ25 164 aa6.96□□□□□ -1.3
RPGR-202ENST00000339363 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
RPGR-202ENST00000339363 TSHBP01222 138 aa6.96□□□□□ -1.3
RPGR-202ENST00000339363 IGF1P05019 195 aa6.96□□□□□ -1.3
RPGR-202ENST00000339363 LINC00311Q8N616 119 aa6.96□□□□□ -1.3
RPGR-202ENST00000339363 RNASE6Q93091 150 aaKnown RBP6.96□□□□□ -1.3
RPGR-202ENST00000339363 MXRA5Q9NR99 2828 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 TRAV23DV6A0A075B6W5 121 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 RBM3P98179 157 aaKnown RBP6.95□□□□□ -1.3
RPGR-202ENST00000339363 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 FLNCQ14315 2725 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 ZNF469Q96JG9 3925 aaPredicted RBP6.95□□□□□ -1.3
RPGR-202ENST00000339363 GHRHP01286 108 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 IGKV3-20P01619 116 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 C15orf32Q32M92 178 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 IGIPA6NJ69 53 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 SUMO4Q6EEV6 95 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 LINC00336Q6ZUF6 198 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 LY6G5BQ8NDX9 201 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
RPGR-202ENST00000339363 EDN2P20800 178 aa6.94□□□□□ -1.3
RPGR-202ENST00000339363 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
RPGR-202ENST00000339363 FBN2P35556 2912 aa6.94□□□□□ -1.3
RPGR-202ENST00000339363 MIAQ16674 131 aa6.94□□□□□ -1.3
RPGR-202ENST00000339363 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
RPGR-202ENST00000339363 TMEM61Q8N0U2 210 aa6.94□□□□□ -1.3
RPGR-202ENST00000339363 COX8CQ7Z4L0 72 aa6.93□□□□□ -1.3
RPGR-202ENST00000339363 FAM223AQ8IWN6 122 aa6.93□□□□□ -1.3
RPGR-202ENST00000339363 COX7A2LO14548 114 aa6.93□□□□□ -1.3
RPGR-202ENST00000339363 CTSGP08311 255 aa6.93□□□□□ -1.3
RPGR-202ENST00000339363 PRIMA1Q86XR5 153 aa6.93□□□□□ -1.3
RPGR-202ENST00000339363 IGHV3-73A0A0B4J1V6 119 aa6.92□□□□□ -1.3
RPGR-202ENST00000339363 LY6LH3BQJ8 138 aa6.92□□□□□ -1.3
RPGR-202ENST00000339363 ZNF672Q499Z4 452 aaPredicted RBP6.92□□□□□ -1.3
RPGR-202ENST00000339363 SPTBN4Q9H254 2564 aa6.92□□□□□ -1.3
RPGR-202ENST00000339363 KNCNA6PVL3 124 aa6.92□□□□□ -1.3
RPGR-202ENST00000339363 F6UB75 175 aa6.92□□□□□ -1.3
RPGR-202ENST00000339363 LINC01560Q8TB33 94 aa6.92□□□□□ -1.3
RPGR-202ENST00000339363 CFAP46Q8IYW2 2715 aa6.92□□□□□ -1.3
RPGR-202ENST00000339363 BUB3O43684 328 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 IGHG2P01859 326 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 PRR9Q5T870 116 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 Q8NA96 180 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 DPM3Q9P2X0 92 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 F8WDY8 70 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 SOCS3O14543 225 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 WFDC9Q8NEX5 89 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 C2orf48Q96LS8 159 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 AMELXQ99217 191 aa6.91□□□□□ -1.3
RPGR-202ENST00000339363 IGLV11-55A0A075B6I3 123 aa6.9□□□□□ -1.3
RPGR-202ENST00000339363 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
RPGR-202ENST00000339363 OXTP01178 125 aa6.9□□□□□ -1.3
RPGR-202ENST00000339363 C5orf38Q86SI9 138 aa6.9□□□□□ -1.3
RPGR-202ENST00000339363 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.31
RPGR-202ENST00000339363 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.31
RPGR-202ENST00000339363 DEFB121Q5J5C9 76 aa6.9□□□□□ -1.31
RPGR-202ENST00000339363 CRPP02741 224 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 VMO1Q7Z5L0 202 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 Q9H8V8 135 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 NDUFC2O95298 119 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 Q5XG85 94 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 GPHB5Q86YW7 130 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 DCANP1Q8TF63 244 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
RPGR-202ENST00000339363 NF1P21359 2839 aa6.88□□□□□ -1.31
RPGR-202ENST00000339363 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.88□□□□□ -1.31
RPGR-202ENST00000339363 FAM223BA6NKX1 122 aa6.88□□□□□ -1.31
RPGR-202ENST00000339363 KAAG1Q9UBP8 84 aa6.88□□□□□ -1.31
RPGR-202ENST00000339363 CCL21O00585 134 aa6.88□□□□□ -1.31
RPGR-202ENST00000339363 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
RPGR-202ENST00000339363 C9orf47Q6ZRZ4 202 aa6.88□□□□□ -1.31
RPGR-202ENST00000339363 C9orf139Q6ZV77 190 aa6.88□□□□□ -1.31
RPGR-202ENST00000339363 RNF5Q99942 180 aa6.88□□□□□ -1.31
RPGR-202ENST00000339363 ABCA2Q9BZC7 2435 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms