RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 COX11Q9Y6N1 276 aa10.06□□□□□ -0.8
PRKN-201ENST00000338468 FAT1Q14517 4588 aa10.06□□□□□ -0.8
PRKN-201ENST00000338468 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 GCSHP23434 173 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 XGP55808 180 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 Q0VG73 95 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 RMI2Q96E14 147 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 RNF185Q96GF1 192 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 TMEM191AQ9H0A3 160 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 PRR34Q9NV39 138 aa10.05□□□□□ -0.8
PRKN-201ENST00000338468 BORCS7Q96B45 105 aa10.04□□□□□ -0.8
PRKN-201ENST00000338468 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
PRKN-201ENST00000338468 SMIM27A0A1W2PRY6 76 aa10.03□□□□□ -0.8
PRKN-201ENST00000338468 COTL1Q14019 142 aa10.03□□□□□ -0.8
PRKN-201ENST00000338468 KRTAP26-1Q6PEX3 210 aa10.03□□□□□ -0.8
PRKN-201ENST00000338468 LINC00269Q8N2A0 174 aa10.03□□□□□ -0.8
PRKN-201ENST00000338468 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
PRKN-201ENST00000338468 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 TRBV6-5A0A0K0K1A5 114 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 A0A1B0GUV1 79 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 SDHAF1A6NFY7 115 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 CRPP02741 224 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 RAB4AP20338 218 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 AMN1Q8IY45 258 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 C1orf43Q9BWL3 253 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 NAT8BQ9UHF3 227 aa10.02□□□□□ -0.81
PRKN-201ENST00000338468 RPS10P46783 165 aaKnown RBP10.01□□□□□ -0.81
PRKN-201ENST00000338468 AMTP48728 403 aa10.01□□□□□ -0.81
PRKN-201ENST00000338468 RIGQ13278 110 aa10.01□□□□□ -0.81
PRKN-201ENST00000338468 MIAQ16674 131 aa10.01□□□□□ -0.81
PRKN-201ENST00000338468 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
PRKN-201ENST00000338468 IFITM2Q01629 132 aa10□□□□□ -0.81
PRKN-201ENST00000338468 Q5VSD8 79 aa10□□□□□ -0.81
PRKN-201ENST00000338468 NCR2O95944 276 aa9.99□□□□□ -0.81
PRKN-201ENST00000338468 REG3AQ06141 175 aa9.99□□□□□ -0.81
PRKN-201ENST00000338468 MRAP2Q96G30 205 aa9.99□□□□□ -0.81
PRKN-201ENST00000338468 TMEM70Q9BUB7 260 aa9.99□□□□□ -0.81
PRKN-201ENST00000338468 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
PRKN-201ENST00000338468 SMKR1H3BMG3 65 aa9.98□□□□□ -0.81
PRKN-201ENST00000338468 POLR2KP53803 58 aaKnown RBP9.98□□□□□ -0.81
PRKN-201ENST00000338468 RAB14P61106 215 aa9.98□□□□□ -0.81
PRKN-201ENST00000338468 CLLU1Q5K131 121 aa9.98□□□□□ -0.81
PRKN-201ENST00000338468 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
PRKN-201ENST00000338468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
PRKN-201ENST00000338468 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
PRKN-201ENST00000338468 I3L3M4 83 aa9.97□□□□□ -0.81
PRKN-201ENST00000338468 UBE2L6O14933 153 aa9.97□□□□□ -0.81
PRKN-201ENST00000338468 TSHBP01222 138 aa9.97□□□□□ -0.81
PRKN-201ENST00000338468 HAMPP81172 84 aa9.97□□□□□ -0.81
PRKN-201ENST00000338468 FAM104BQ5XKR9 115 aa9.97□□□□□ -0.81
PRKN-201ENST00000338468 NRACQ8N912 160 aa9.97□□□□□ -0.81
PRKN-201ENST00000338468 ST20Q9HBF5 79 aa9.97□□□□□ -0.81
PRKN-201ENST00000338468 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
PRKN-201ENST00000338468 HLA-DQA1P01909 254 aa9.96□□□□□ -0.82
PRKN-201ENST00000338468 APCSP02743 223 aa9.96□□□□□ -0.82
PRKN-201ENST00000338468 ESDP10768 282 aa9.96□□□□□ -0.82
PRKN-201ENST00000338468 PMCHP20382 165 aa9.96□□□□□ -0.82
PRKN-201ENST00000338468 LINC01620Q4KN68 170 aa9.96□□□□□ -0.82
PRKN-201ENST00000338468 MRPL51Q4U2R6 128 aaKnown RBP9.96□□□□□ -0.82
PRKN-201ENST00000338468 TRBV27A0A0K0K1C4 114 aa9.95□□□□□ -0.82
PRKN-201ENST00000338468 A0A1B0GXF2 115 aa9.95□□□□□ -0.82
PRKN-201ENST00000338468 USP17L23D6RBM5 183 aa9.95□□□□□ -0.82
PRKN-201ENST00000338468 CAMPP49913 170 aa9.95□□□□□ -0.82
PRKN-201ENST00000338468 Q6ZSA8 131 aa9.95□□□□□ -0.82
PRKN-201ENST00000338468 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
PRKN-201ENST00000338468 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
PRKN-201ENST00000338468 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
PRKN-201ENST00000338468 H7C423 109 aa9.94□□□□□ -0.82
PRKN-201ENST00000338468 MRPL54Q6P161 138 aaKnown RBP9.94□□□□□ -0.82
PRKN-201ENST00000338468 TRAV8-4A0A0B4J246 113 aa9.93□□□□□ -0.82
PRKN-201ENST00000338468 A0A1B0GW15 77 aa9.93□□□□□ -0.82
PRKN-201ENST00000338468 PRSS1P07477 247 aa9.93□□□□□ -0.82
PRKN-201ENST00000338468 FGF6P10767 208 aa9.93□□□□□ -0.82
PRKN-201ENST00000338468 HBBP68871 147 aa9.92□□□□□ -0.82
PRKN-201ENST00000338468 PNRC1Q12796 327 aaPredicted RBP9.92□□□□□ -0.82
PRKN-201ENST00000338468 C14orf177Q52M58 125 aa9.92□□□□□ -0.82
PRKN-201ENST00000338468 SRRM2Q9UQ35 2752 aaKnown RBP9.92□□□□□ -0.82
PRKN-201ENST00000338468 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
PRKN-201ENST00000338468 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
PRKN-201ENST00000338468 AMMECR1LQ6DCA0 310 aa9.91□□□□□ -0.82
PRKN-201ENST00000338468 RNASEKQ6P5S7 137 aaKnown RBP9.91□□□□□ -0.82
PRKN-201ENST00000338468 TRBV24-1A0A075B6N3 115 aa9.9□□□□□ -0.82
PRKN-201ENST00000338468 LINC00862A6NCI5 91 aa9.9□□□□□ -0.82
PRKN-201ENST00000338468 VCYO14598 125 aa9.9□□□□□ -0.82
PRKN-201ENST00000338468 PPP1R17O96001 155 aa9.9□□□□□ -0.82
PRKN-201ENST00000338468 SMR3BP02814 79 aaPredicted RBP9.9□□□□□ -0.82
PRKN-201ENST00000338468 ADCYAP1P18509 176 aa9.9□□□□□ -0.82
PRKN-201ENST00000338468 IGKV3OR2-268A0A0C4DH90 116 aa9.89□□□□□ -0.83
PRKN-201ENST00000338468 ZNF25P17030 456 aaPredicted RBP9.89□□□□□ -0.83
PRKN-201ENST00000338468 ATP5L2Q7Z4Y8 100 aa9.89□□□□□ -0.83
PRKN-201ENST00000338468 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
PRKN-201ENST00000338468 C7orf77A4D0Y5 90 aa9.88□□□□□ -0.83
PRKN-201ENST00000338468 J3QL48 77 aa9.88□□□□□ -0.83
PRKN-201ENST00000338468 TNFRSF6BO95407 300 aa9.88□□□□□ -0.83
PRKN-201ENST00000338468 S100A8P05109 93 aa9.88□□□□□ -0.83
PRKN-201ENST00000338468 CKS2P33552 79 aa9.88□□□□□ -0.83
PRKN-201ENST00000338468 RPL32P62910 135 aaKnown RBP9.88□□□□□ -0.83
PRKN-201ENST00000338468 ANAPC16Q96DE5 110 aa9.88□□□□□ -0.83
PRKN-201ENST00000338468 C20orf78Q9BR46 151 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms