RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RHOHQ15669 191 aa10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 GAGE13Q4V321 117 aa10.39□□□□□ -0.75
CDK5RAP3-201ENST00000338399 IGHV3-38A0A0C4DH36 116 aa10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 TSHBP01222 138 aa10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 C12orf74Q32Q52 190 aa10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 CRYBA4P53673 196 aa10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 PRO0255Q9UI72 69 aa10.38□□□□□ -0.75
CDK5RAP3-201ENST00000338399 EREGO14944 169 aa10.37□□□□□ -0.75
CDK5RAP3-201ENST00000338399 HTN3P15516 51 aa10.37□□□□□ -0.75
CDK5RAP3-201ENST00000338399 KRTDAPP60985 99 aa10.37□□□□□ -0.75
CDK5RAP3-201ENST00000338399 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
CDK5RAP3-201ENST00000338399 C3orf79P0CE67 100 aa10.36□□□□□ -0.75
CDK5RAP3-201ENST00000338399 UBE2D3P61077 147 aa10.36□□□□□ -0.75
CDK5RAP3-201ENST00000338399 UBE2D2P62837 147 aa10.36□□□□□ -0.75
CDK5RAP3-201ENST00000338399 HSPB8Q9UJY1 196 aa10.36□□□□□ -0.75
CDK5RAP3-201ENST00000338399 F5H768 121 aa10.36□□□□□ -0.75
CDK5RAP3-201ENST00000338399 PAX4O43316 350 aa10.35□□□□□ -0.75
CDK5RAP3-201ENST00000338399 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
CDK5RAP3-201ENST00000338399 B9D2Q9BPU9 175 aa10.35□□□□□ -0.75
CDK5RAP3-201ENST00000338399 A0A0J9YY99 117 aa10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 GYPEP15421 78 aa10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 TOMM6Q96B49 74 aa10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 NANOS2P60321 138 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 COTL1Q14019 142 aa10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 Q6ZTC4 211 aa10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 VSIG2Q96IQ7 327 aa10.34□□□□□ -0.75
CDK5RAP3-201ENST00000338399 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
CDK5RAP3-201ENST00000338399 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-201ENST00000338399 IFI27L1Q96BM0 104 aa10.33□□□□□ -0.76
CDK5RAP3-201ENST00000338399 SNHG12Q9BXW3 62 aa10.33□□□□□ -0.76
CDK5RAP3-201ENST00000338399 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
CDK5RAP3-201ENST00000338399 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
CDK5RAP3-201ENST00000338399 DNAH9Q9NYC9 4486 aa10.33□□□□□ -0.76
CDK5RAP3-201ENST00000338399 H0Y8G0 127 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 SCGB1D1O95968 90 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 LINC00694P0DN24 101 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 G0S2P27469 103 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 C20orf203Q8NBC4 194 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 CHCHD7Q9BUK0 85 aa10.32□□□□□ -0.76
CDK5RAP3-201ENST00000338399 M0R143 59 aa10.31□□□□□ -0.76
CDK5RAP3-201ENST00000338399 SPATA12Q7Z6I5 190 aa10.31□□□□□ -0.76
CDK5RAP3-201ENST00000338399 ATP5LO75964 103 aa10.3□□□□□ -0.76
CDK5RAP3-201ENST00000338399 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
CDK5RAP3-201ENST00000338399 A0A096LPF7 62 aa10.3□□□□□ -0.76
CDK5RAP3-201ENST00000338399 Q8N976 141 aa10.3□□□□□ -0.76
CDK5RAP3-201ENST00000338399 ATP6V0E2Q8NHE4 81 aa10.3□□□□□ -0.76
CDK5RAP3-201ENST00000338399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-201ENST00000338399 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-201ENST00000338399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-201ENST00000338399 ERASQ7Z444 233 aa10.29□□□□□ -0.76
CDK5RAP3-201ENST00000338399 LINC01549A6NIU2 74 aa10.28□□□□□ -0.76
CDK5RAP3-201ENST00000338399 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
CDK5RAP3-201ENST00000338399 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
CDK5RAP3-201ENST00000338399 IGIPA6NJ69 53 aa10.27□□□□□ -0.76
CDK5RAP3-201ENST00000338399 PRSS1P07477 247 aa10.27□□□□□ -0.76
CDK5RAP3-201ENST00000338399 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
CDK5RAP3-201ENST00000338399 Q6ZN92 141 aa10.27□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
CDK5RAP3-201ENST00000338399 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
CDK5RAP3-201ENST00000338399 MRPL23Q16540 153 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TRBV25-1A0A075B6N4 114 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TRBV6-8A0A0A6YYG3 113 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 C20orf202A1L168 122 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 LINC01545Q5VT33 79 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TEX43Q6ZNM6 134 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 BAALCQ8WXS3 180 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
CDK5RAP3-201ENST00000338399 ATOH7Q8N100 152 aa10.24□□□□□ -0.77
CDK5RAP3-201ENST00000338399 UBE2D4Q9Y2X8 147 aa10.24□□□□□ -0.77
CDK5RAP3-201ENST00000338399 ZC2HC1BQ5TFG8 222 aa10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 LGALS9CQ6DKI2 356 aa10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 PYGO1Q9Y3Y4 419 aa10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 PRKDCP78527 4128 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TRAV10A0A0B4J240 114 aa10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 H3BNG1 76 aa10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 ZNF25P17030 456 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 SPANXA1Q9NS26 97 aa10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 COL7A1Q02388 2944 aa10.23□□□□□ -0.77
CDK5RAP3-201ENST00000338399 IGLV4-3A0A075B6K6 122 aa10.22□□□□□ -0.77
CDK5RAP3-201ENST00000338399 UBE2L6O14933 153 aa10.22□□□□□ -0.77
CDK5RAP3-201ENST00000338399 DLEU1O43261 78 aa10.22□□□□□ -0.77
CDK5RAP3-201ENST00000338399 ODF1Q14990 250 aa10.22□□□□□ -0.77
CDK5RAP3-201ENST00000338399 MIEN1Q9BRT3 115 aa10.22□□□□□ -0.77
CDK5RAP3-201ENST00000338399 A0A087WX48 190 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms