RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 OR11H12B2RN74 326 aa16.77■□□□□ 0.27
CLPTM1-201ENST00000337392 RPL35AP18077 110 aaKnown RBP16.76■□□□□ 0.27
CLPTM1-201ENST00000337392 TRPT1Q86TN4 253 aaKnown RBP16.76■□□□□ 0.27
CLPTM1-201ENST00000337392 SPATA3Q8NHX4 192 aa16.76■□□□□ 0.27
CLPTM1-201ENST00000337392 INSP01308 110 aa16.76■□□□□ 0.27
CLPTM1-201ENST00000337392 PHLDA1Q8WV24 401 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-201ENST00000337392 SPCS1Q9Y6A9 102 aa16.76■□□□□ 0.27
CLPTM1-201ENST00000337392 M0R2P5 195 aa16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 IGHV3-53P01767 116 aa16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 HILS1P60008 231 aa16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 CFAP126Q5VTH2 177 aa16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 TEX29Q8N6K0 151 aa16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 TEP1Q99973 2627 aaKnown RBP16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 TRBV6-5A0A0K0K1A5 114 aa16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 ZNRF2Q8NHG8 242 aa16.75■□□□□ 0.27
CLPTM1-201ENST00000337392 OR5A1Q8NGJ0 315 aa16.74■□□□□ 0.27
CLPTM1-201ENST00000337392 ZNF418Q8TF45 676 aaPredicted RBP16.74■□□□□ 0.27
CLPTM1-201ENST00000337392 TRAV2A0A0B4J234 112 aa16.73■□□□□ 0.27
CLPTM1-201ENST00000337392 PRADC1Q9BSG0 188 aa16.73■□□□□ 0.27
CLPTM1-201ENST00000337392 IGHV3-64A0A075B6Q5 118 aa16.73■□□□□ 0.27
CLPTM1-201ENST00000337392 ZNF415Q09FC8 603 aa16.73■□□□□ 0.27
CLPTM1-201ENST00000337392 A0A1W2PPM0 123 aa16.72■□□□□ 0.27
CLPTM1-201ENST00000337392 INAFM1C9JVW0 142 aa16.72■□□□□ 0.27
CLPTM1-201ENST00000337392 TMEM170BQ5T4T1 132 aa16.71■□□□□ 0.27
CLPTM1-201ENST00000337392 PLEKHB2Q96CS7 222 aa16.71■□□□□ 0.27
CLPTM1-201ENST00000337392 A6NDN8 102 aa16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 I3L3M4 83 aa16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 RPL32P62910 135 aaKnown RBP16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 OR11H2Q8NH07 326 aa16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 C16orf95Q9H693 158 aa16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 TRGV1A0A0A0MS02 117 aa16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 PMVKQ15126 192 aa16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 GEMIN7Q9H840 131 aaKnown RBP16.7■□□□□ 0.26
CLPTM1-201ENST00000337392 SIVA1O15304 175 aa16.69■□□□□ 0.26
CLPTM1-201ENST00000337392 GIG44P09565 113 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1-201ENST00000337392 TSPEAR-AS2P59090 65 aa16.69■□□□□ 0.26
CLPTM1-201ENST00000337392 Q6ZTI0 123 aa16.69■□□□□ 0.26
CLPTM1-201ENST00000337392 C20orf203Q8NBC4 194 aa16.69■□□□□ 0.26
CLPTM1-201ENST00000337392 SPATA25Q9BR10 227 aa16.68■□□□□ 0.26
CLPTM1-201ENST00000337392 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.68■□□□□ 0.26
CLPTM1-201ENST00000337392 IGKV2-29A2NJV5 120 aaPredicted RBP16.68■□□□□ 0.26
CLPTM1-201ENST00000337392 ZNF479Q96JC4 524 aa16.68■□□□□ 0.26
CLPTM1-201ENST00000337392 NHP2Q9NX24 153 aaKnown RBP16.68■□□□□ 0.26
CLPTM1-201ENST00000337392 TNFRSF18Q9Y5U5 241 aa16.67■□□□□ 0.26
CLPTM1-201ENST00000337392 FAM104AQ969W3 186 aa16.66■□□□□ 0.26
CLPTM1-201ENST00000337392 A8MWV9 139 aa16.66■□□□□ 0.26
CLPTM1-201ENST00000337392 TIMM17AQ99595 171 aa16.66■□□□□ 0.26
CLPTM1-201ENST00000337392 F8P00451 2351 aa16.65■□□□□ 0.26
CLPTM1-201ENST00000337392 MYMXA0A1B0GTQ4 84 aa16.65■□□□□ 0.26
CLPTM1-201ENST00000337392 ZNF815PA8K554 130 aa16.65■□□□□ 0.26
CLPTM1-201ENST00000337392 SHISA2Q6UWI4 295 aa16.65■□□□□ 0.26
CLPTM1-201ENST00000337392 A0A0J9YXV3 536 aa16.65■□□□□ 0.26
CLPTM1-201ENST00000337392 HIST1H4GQ99525 98 aa16.65■□□□□ 0.26
CLPTM1-201ENST00000337392 TRAV25A0A0B4J276 109 aa16.64■□□□□ 0.25
CLPTM1-201ENST00000337392 IGLV1-51P01701 117 aa16.64■□□□□ 0.25
CLPTM1-201ENST00000337392 NOP10Q9NPE3 64 aaKnown RBP16.64■□□□□ 0.25
CLPTM1-201ENST00000337392 IGLV4-3A0A075B6K6 122 aa16.64■□□□□ 0.25
CLPTM1-201ENST00000337392 E9PLD3 99 aa16.64■□□□□ 0.25
CLPTM1-201ENST00000337392 C19orf73Q9NVV2 129 aa16.64■□□□□ 0.25
CLPTM1-201ENST00000337392 FABP2P12104 132 aa16.63■□□□□ 0.25
CLPTM1-201ENST00000337392 CEND1Q8N111 149 aa16.63■□□□□ 0.25
CLPTM1-201ENST00000337392 PGPEP1Q9NXJ5 209 aa16.63■□□□□ 0.25
CLPTM1-201ENST00000337392 TSPAN13O95857 204 aa16.62■□□□□ 0.25
CLPTM1-201ENST00000337392 TMEM141Q96I45 108 aa16.62■□□□□ 0.25
CLPTM1-201ENST00000337392 HIGD1BQ9P298 99 aa16.62■□□□□ 0.25
CLPTM1-201ENST00000337392 SPANXB1Q9NS25 103 aaPredicted RBP16.62■□□□□ 0.25
CLPTM1-201ENST00000337392 RHOHQ15669 191 aa16.61■□□□□ 0.25
CLPTM1-201ENST00000337392 SCGB1D4Q6XE38 83 aa16.61■□□□□ 0.25
CLPTM1-201ENST00000337392 LINC00467Q9BRT7 94 aa16.61■□□□□ 0.25
CLPTM1-201ENST00000337392 SS18L2Q9UHA2 77 aa16.6■□□□□ 0.25
CLPTM1-201ENST00000337392 PKD1L1Q8TDX9 2849 aa16.6■□□□□ 0.25
CLPTM1-201ENST00000337392 SAMD5Q5TGI4 173 aa16.6■□□□□ 0.25
CLPTM1-201ENST00000337392 CHCHD7Q9BUK0 85 aa16.59■□□□□ 0.25
CLPTM1-201ENST00000337392 WFDC2Q14508 124 aa16.59■□□□□ 0.25
CLPTM1-201ENST00000337392 PF4P02776 101 aa16.58■□□□□ 0.24
CLPTM1-201ENST00000337392 BEAN1Q3B7T3 259 aa16.58■□□□□ 0.24
CLPTM1-201ENST00000337392 VCX2Q9H322 139 aa16.58■□□□□ 0.24
CLPTM1-201ENST00000337392 ANK2Q01484 3957 aa16.57■□□□□ 0.24
CLPTM1-201ENST00000337392 A8MZ25 164 aa16.57■□□□□ 0.24
CLPTM1-201ENST00000337392 RS1O15537 224 aa16.57■□□□□ 0.24
CLPTM1-201ENST00000337392 TRBV7-3A0A075B6L6 115 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE7O76087 117 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE12FP0CL80 117 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE12GP0CL81 117 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 GAGE12IP0CL82 117 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 SH2D6Q7Z4S9 175 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 SPXQ9BT56 116 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 LOC100131303A0A0U1RQF7 123 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 SMIM13P0DJ93 91 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 TM2D2Q9BX73 214 aa16.56■□□□□ 0.24
CLPTM1-201ENST00000337392 NDUFA7O95182 113 aa16.55■□□□□ 0.24
CLPTM1-201ENST00000337392 Q6ZUT4 128 aa16.55■□□□□ 0.24
CLPTM1-201ENST00000337392 PLAC8L1A1L4L8 177 aa16.55■□□□□ 0.24
CLPTM1-201ENST00000337392 SFTA2Q6UW10 78 aa16.55■□□□□ 0.24
CLPTM1-201ENST00000337392 TRAV8-3A0A0A6YYJ7 113 aa16.54■□□□□ 0.24
CLPTM1-201ENST00000337392 ZNF22P17026 224 aaPredicted RBP16.54■□□□□ 0.24
CLPTM1-201ENST00000337392 IL17DQ8TAD2 202 aa16.54■□□□□ 0.24
CLPTM1-201ENST00000337392 J3QR89 54 aa16.54■□□□□ 0.24
CLPTM1-201ENST00000337392 STAB1Q9NY15 2570 aa16.54■□□□□ 0.24
CLPTM1-201ENST00000337392 INSL3P51460 131 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms