RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 CHCHD7Q9BUK0 85 aa10.47□□□□□ -0.73
SEC13-201ENST00000337354 PRSS47A8MTI9 375 aa10.46□□□□□ -0.74
SEC13-201ENST00000337354 TCAPO15273 167 aa10.46□□□□□ -0.74
SEC13-201ENST00000337354 KIR2DL4Q99706 377 aa10.46□□□□□ -0.74
SEC13-201ENST00000337354 CHCHD5Q9BSY4 110 aa10.46□□□□□ -0.74
SEC13-201ENST00000337354 A0A087WX48 190 aa10.45□□□□□ -0.74
SEC13-201ENST00000337354 TMEM262E9PQX1 116 aa10.45□□□□□ -0.74
SEC13-201ENST00000337354 NPYP01303 97 aa10.45□□□□□ -0.74
SEC13-201ENST00000337354 AMTP48728 403 aa10.45□□□□□ -0.74
SEC13-201ENST00000337354 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
SEC13-201ENST00000337354 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
SEC13-201ENST00000337354 H7C423 109 aa10.44□□□□□ -0.74
SEC13-201ENST00000337354 M0R2N4 97 aa10.44□□□□□ -0.74
SEC13-201ENST00000337354 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
SEC13-201ENST00000337354 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
SEC13-201ENST00000337354 S100A1P23297 94 aa10.43□□□□□ -0.74
SEC13-201ENST00000337354 FCER1GP30273 86 aa10.43□□□□□ -0.74
SEC13-201ENST00000337354 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
SEC13-201ENST00000337354 SMIM2Q9BVW6 85 aa10.43□□□□□ -0.74
SEC13-201ENST00000337354 MAP1LC3AQ9H492 121 aa10.43□□□□□ -0.74
SEC13-201ENST00000337354 UBE2L6O14933 153 aa10.42□□□□□ -0.74
SEC13-201ENST00000337354 TSHBP01222 138 aa10.42□□□□□ -0.74
SEC13-201ENST00000337354 KIAA1644Q3SXP7 199 aa10.42□□□□□ -0.74
SEC13-201ENST00000337354 VPS13DQ5THJ4 4388 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 A0A1B0GUV1 79 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 IBA57-AS1B1ANH7 110 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 ESDP10768 282 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 DEFB104AQ8WTQ1 72 aa10.41□□□□□ -0.74
SEC13-201ENST00000337354 K7EMI3 77 aa10.4□□□□□ -0.74
SEC13-201ENST00000337354 RAB5AP20339 215 aa10.4□□□□□ -0.74
SEC13-201ENST00000337354 GAGE6Q13070 117 aa10.4□□□□□ -0.74
SEC13-201ENST00000337354 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
SEC13-201ENST00000337354 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
SEC13-201ENST00000337354 KRTAP1-5Q9BYS1 174 aa10.4□□□□□ -0.74
SEC13-201ENST00000337354 LAGE3Q14657 143 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 C6orf223Q8N319 242 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 Q8N8P6 123 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 NXT2Q9NPJ8 142 aaKnown RBP10.39□□□□□ -0.75
SEC13-201ENST00000337354 DNAH6Q9C0G6 4158 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 KMT2AQ03164 3969 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 RBX1P62877 108 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 SMAGPQ0VAQ4 97 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 MPV17L2Q567V2 206 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 NFE4Q86UQ8 179 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 TMEM18Q96B42 140 aa10.39□□□□□ -0.75
SEC13-201ENST00000337354 TRAV8-3A0A0A6YYJ7 113 aa10.38□□□□□ -0.75
SEC13-201ENST00000337354 COLCA2A8K830 154 aa10.38□□□□□ -0.75
SEC13-201ENST00000337354 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
SEC13-201ENST00000337354 ATP6V1G1O75348 118 aa10.37□□□□□ -0.75
SEC13-201ENST00000337354 AMMECR1LQ6DCA0 310 aa10.37□□□□□ -0.75
SEC13-201ENST00000337354 Q8N3U1 123 aa10.37□□□□□ -0.75
SEC13-201ENST00000337354 Q8N976 141 aa10.37□□□□□ -0.75
SEC13-201ENST00000337354 KLK12Q9UKR0 248 aa10.37□□□□□ -0.75
SEC13-201ENST00000337354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
SEC13-201ENST00000337354 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
SEC13-201ENST00000337354 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
SEC13-201ENST00000337354 FGF6P10767 208 aa10.36□□□□□ -0.75
SEC13-201ENST00000337354 G0S2P27469 103 aa10.36□□□□□ -0.75
SEC13-201ENST00000337354 Q0VG73 95 aa10.36□□□□□ -0.75
SEC13-201ENST00000337354 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
SEC13-201ENST00000337354 PRSS3P2Q8NHM4 247 aa10.36□□□□□ -0.75
SEC13-201ENST00000337354 SCO1O75880 301 aa10.35□□□□□ -0.75
SEC13-201ENST00000337354 IFI27P40305 119 aaPredicted RBP10.35□□□□□ -0.75
SEC13-201ENST00000337354 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
SEC13-201ENST00000337354 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
SEC13-201ENST00000337354 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
SEC13-201ENST00000337354 CSDC2Q9Y534 153 aaKnown RBP10.35□□□□□ -0.75
SEC13-201ENST00000337354 RNASEKQ6P5S7 137 aaKnown RBP10.34□□□□□ -0.75
SEC13-201ENST00000337354 LINC00336Q6ZUF6 198 aa10.34□□□□□ -0.75
SEC13-201ENST00000337354 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
SEC13-201ENST00000337354 IGLV4-60A0A075B6I1 120 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 CRPP02741 224 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 RMI2Q96E14 147 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
SEC13-201ENST00000337354 EPPK1P58107 5090 aaKnown RBP10.33□□□□□ -0.76
SEC13-201ENST00000337354 RTL8CO15255 209 aa10.32□□□□□ -0.76
SEC13-201ENST00000337354 TRGC2P03986 189 aa10.32□□□□□ -0.76
SEC13-201ENST00000337354 MIAQ16674 131 aa10.32□□□□□ -0.76
SEC13-201ENST00000337354 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
SEC13-201ENST00000337354 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
SEC13-201ENST00000337354 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
SEC13-201ENST00000337354 UBE2D4Q9Y2X8 147 aa10.32□□□□□ -0.76
SEC13-201ENST00000337354 LINC01546A6NGU7 62 aa10.31□□□□□ -0.76
SEC13-201ENST00000337354 REG3AQ06141 175 aa10.31□□□□□ -0.76
SEC13-201ENST00000337354 C18orf32Q8TCD1 76 aa10.31□□□□□ -0.76
SEC13-201ENST00000337354 Q9HAA7 133 aa10.31□□□□□ -0.76
SEC13-201ENST00000337354 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
SEC13-201ENST00000337354 RAB5BP61020 215 aa10.3□□□□□ -0.76
SEC13-201ENST00000337354 Q6ZRN7 208 aaPredicted RBP10.3□□□□□ -0.76
SEC13-201ENST00000337354 FA2HQ7L5A8 372 aa10.3□□□□□ -0.76
SEC13-201ENST00000337354 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms