RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 NAA38Q9BRA0 125 aaKnown RBP12.11□□□□□ -0.47
TMEM39B-201ENST00000336294 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
TMEM39B-201ENST00000336294 ACANP16112 2415 aa12.1□□□□□ -0.47
TMEM39B-201ENST00000336294 RS1O15537 224 aa12.1□□□□□ -0.47
TMEM39B-201ENST00000336294 LY6G6DO95868 133 aa12.1□□□□□ -0.47
TMEM39B-201ENST00000336294 FAM110AQ9BQ89 295 aa12.1□□□□□ -0.47
TMEM39B-201ENST00000336294 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
TMEM39B-201ENST00000336294 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
TMEM39B-201ENST00000336294 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
TMEM39B-201ENST00000336294 VPS25Q9BRG1 176 aa12.09□□□□□ -0.47
TMEM39B-201ENST00000336294 OTOGQ6ZRI0 2925 aa12.09□□□□□ -0.47
TMEM39B-201ENST00000336294 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
TMEM39B-201ENST00000336294 IGLL5B9A064 214 aa12.09□□□□□ -0.47
TMEM39B-201ENST00000336294 AZU1P20160 251 aa12.09□□□□□ -0.47
TMEM39B-201ENST00000336294 TMEM238LA0A1B0GVL6 79 aa12.08□□□□□ -0.48
TMEM39B-201ENST00000336294 A6NJY4 79 aa12.08□□□□□ -0.48
TMEM39B-201ENST00000336294 K7ERJ3 54 aa12.08□□□□□ -0.48
TMEM39B-201ENST00000336294 IGHV3-53P01767 116 aa12.08□□□□□ -0.48
TMEM39B-201ENST00000336294 IL17DQ8TAD2 202 aa12.08□□□□□ -0.48
TMEM39B-201ENST00000336294 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
TMEM39B-201ENST00000336294 Q6ZSN1 163 aa12.07□□□□□ -0.48
TMEM39B-201ENST00000336294 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
TMEM39B-201ENST00000336294 CUBNO60494 3623 aa12.07□□□□□ -0.48
TMEM39B-201ENST00000336294 NDUFA11Q86Y39 141 aa12.07□□□□□ -0.48
TMEM39B-201ENST00000336294 ZNF815PA8K554 130 aa12.06□□□□□ -0.48
TMEM39B-201ENST00000336294 EMP1P54849 157 aa12.06□□□□□ -0.48
TMEM39B-201ENST00000336294 RRN3P1Q2M238 152 aa12.06□□□□□ -0.48
TMEM39B-201ENST00000336294 G3V4G9 280 aa12.05□□□□□ -0.48
TMEM39B-201ENST00000336294 TMEM263Q8WUH6 116 aaKnown RBP12.05□□□□□ -0.48
TMEM39B-201ENST00000336294 PYGO1Q9Y3Y4 419 aa12.05□□□□□ -0.48
TMEM39B-201ENST00000336294 IGLV4-3A0A075B6K6 122 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 NFE4Q86UQ8 179 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 OPRPNQ99935 248 aaPredicted RBP12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 NACAE9PAV3 2078 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 TRGV1A0A0A0MS02 117 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 TMEM170BQ5T4T1 132 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 ZNRF2Q8NHG8 242 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 VCX2Q9H322 139 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 SPANXB1Q9NS25 103 aaPredicted RBP12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
TMEM39B-201ENST00000336294 F8W1H4 67 aa12.03□□□□□ -0.48
TMEM39B-201ENST00000336294 KRTAP10-3P60369 221 aa12.02□□□□□ -0.48
TMEM39B-201ENST00000336294 SCGB1D4Q6XE38 83 aa12.02□□□□□ -0.48
TMEM39B-201ENST00000336294 C1QTNF4Q9BXJ3 329 aa12.02□□□□□ -0.48
TMEM39B-201ENST00000336294 WFDC10AQ9H1F0 79 aa12.02□□□□□ -0.48
TMEM39B-201ENST00000336294 Q9UF83 564 aa12.02□□□□□ -0.48
TMEM39B-201ENST00000336294 PF4P02776 101 aa12.02□□□□□ -0.49
TMEM39B-201ENST00000336294 GIG44P09565 113 aaPredicted RBP12.02□□□□□ -0.49
TMEM39B-201ENST00000336294 CRYBA4P53673 196 aa12.02□□□□□ -0.49
TMEM39B-201ENST00000336294 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
TMEM39B-201ENST00000336294 UBE2D1P51668 147 aa12.01□□□□□ -0.49
TMEM39B-201ENST00000336294 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
TMEM39B-201ENST00000336294 WNK1Q9H4A3 2382 aa12.01□□□□□ -0.49
TMEM39B-201ENST00000336294 COTL1Q14019 142 aa12□□□□□ -0.49
TMEM39B-201ENST00000336294 C16orf74Q96GX8 76 aa12□□□□□ -0.49
TMEM39B-201ENST00000336294 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
TMEM39B-201ENST00000336294 NF1P21359 2839 aa12□□□□□ -0.49
TMEM39B-201ENST00000336294 AMELXQ99217 191 aa12□□□□□ -0.49
TMEM39B-201ENST00000336294 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
TMEM39B-201ENST00000336294 A0A0J9YY99 117 aa11.99□□□□□ -0.49
TMEM39B-201ENST00000336294 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
TMEM39B-201ENST00000336294 Q6ZTI0 123 aa11.99□□□□□ -0.49
TMEM39B-201ENST00000336294 LINC00482Q8N8I6 264 aa11.99□□□□□ -0.49
TMEM39B-201ENST00000336294 HIVEP2P31629 2446 aa11.98□□□□□ -0.49
TMEM39B-201ENST00000336294 INAFM1C9JVW0 142 aa11.98□□□□□ -0.49
TMEM39B-201ENST00000336294 LYRM7Q5U5X0 104 aa11.98□□□□□ -0.49
TMEM39B-201ENST00000336294 PLEKHB2Q96CS7 222 aa11.98□□□□□ -0.49
TMEM39B-201ENST00000336294 IGHV3-38A0A0C4DH36 116 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 TMEM223A0PJW6 202 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 SRSF9Q13242 221 aaKnown RBP eCLIP11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 C21orf62-AS1Q17RA5 79 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 MTORP42345 2549 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 A0A0J9YXV3 536 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 TRBV10-1A0A0K0K1A3 114 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 ZNF22P17026 224 aaPredicted RBP11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 FAM104AQ969W3 186 aa11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
TMEM39B-201ENST00000336294 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 J3QQQ9 107 aa11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 K7EQD1 137 aa11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 LEPROTO15243 131 aa11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 LGALS3P17931 250 aaKnown RBP11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 TSPEAR-AS2P59090 65 aa11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 CEMP1Q6PRD7 247 aaPredicted RBP11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 SLC25A29Q8N8R3 303 aa11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 CSNK1G2-AS1Q8NCQ2 148 aa11.96□□□□□ -0.49
TMEM39B-201ENST00000336294 RPL36AP83881 106 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-201ENST00000336294 RPL36ALQ969Q0 106 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-201ENST00000336294 PLAC8L1A1L4L8 177 aa11.95□□□□□ -0.5
TMEM39B-201ENST00000336294 J3QR89 54 aa11.95□□□□□ -0.5
TMEM39B-201ENST00000336294 MRPS36P82909 103 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-201ENST00000336294 PGPEP1Q9NXJ5 209 aa11.95□□□□□ -0.5
TMEM39B-201ENST00000336294 TEP1Q99973 2627 aaKnown RBP11.94□□□□□ -0.5
TMEM39B-201ENST00000336294 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 TEX48A0A1B0GUV7 120 aa11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 CIDEAO60543 219 aa11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 IGHV3-30P01768 117 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms