RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GAGE12JA6NER3 117 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 GAGE7O76087 117 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 NHLRC4P0CG21 123 aaPredicted RBP9.19□□□□□ -0.94
LIMK1-201ENST00000336180 GAGE12FP0CL80 117 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 GAGE12GP0CL81 117 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 GAGE12IP0CL82 117 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 GAGE4Q13068 117 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 WFDC2Q14508 124 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 LGALS9BQ3B8N2 356 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 LGALS9CQ6DKI2 356 aa9.19□□□□□ -0.94
LIMK1-201ENST00000336180 CEMP1Q6PRD7 247 aaPredicted RBP9.19□□□□□ -0.94
LIMK1-201ENST00000336180 TRBV20-1A0A075B6N2 111 aa9.18□□□□□ -0.94
LIMK1-201ENST00000336180 HILS1P60008 231 aa9.18□□□□□ -0.94
LIMK1-201ENST00000336180 OR5A1Q8NGJ0 315 aa9.18□□□□□ -0.94
LIMK1-201ENST00000336180 CYSLTR1Q9Y271 337 aa9.18□□□□□ -0.94
LIMK1-201ENST00000336180 SPANXB1Q9NS25 103 aaPredicted RBP9.18□□□□□ -0.94
LIMK1-201ENST00000336180 F5H768 121 aa9.17□□□□□ -0.94
LIMK1-201ENST00000336180 IGKCP01834 107 aa9.17□□□□□ -0.94
LIMK1-201ENST00000336180 C2orf91Q6ZV80 131 aa9.17□□□□□ -0.94
LIMK1-201ENST00000336180 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
LIMK1-201ENST00000336180 SYT8Q8NBV8 401 aa9.17□□□□□ -0.94
LIMK1-201ENST00000336180 TM2D2Q9BX73 214 aa9.17□□□□□ -0.94
LIMK1-201ENST00000336180 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 M0QY20 66 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 COX8AP10176 69 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 XGP55808 180 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 FHL3Q13643 280 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 IGHV3-64A0A075B6Q5 118 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 HHLA3Q9XRX5 114 aa9.16□□□□□ -0.94
LIMK1-201ENST00000336180 PF4P02776 101 aa9.15□□□□□ -0.94
LIMK1-201ENST00000336180 MAPKAPK5-AS1Q8N8E1 139 aa9.15□□□□□ -0.94
LIMK1-201ENST00000336180 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
LIMK1-201ENST00000336180 DPM2O94777 84 aa9.15□□□□□ -0.94
LIMK1-201ENST00000336180 NXPH4O95158 308 aa9.15□□□□□ -0.94
LIMK1-201ENST00000336180 FGF6P10767 208 aa9.15□□□□□ -0.94
LIMK1-201ENST00000336180 C1orf158Q8N1D5 194 aa9.15□□□□□ -0.94
LIMK1-201ENST00000336180 TRGV11A0A075B6L2 103 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 TSHBP01222 138 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 STAB1Q9NY15 2570 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 ATP5LO75964 103 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 INSP01308 110 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 ORMDL2Q53FV1 153 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 ODF3Q96PU9 254 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 KIR2DL4Q99706 377 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 CDIP1Q9H305 208 aa9.14□□□□□ -0.95
LIMK1-201ENST00000336180 Q6ZUT4 128 aa9.13□□□□□ -0.95
LIMK1-201ENST00000336180 TEX29Q8N6K0 151 aa9.13□□□□□ -0.95
LIMK1-201ENST00000336180 FABP2P12104 132 aa9.13□□□□□ -0.95
LIMK1-201ENST00000336180 POLR2KP53803 58 aaKnown RBP9.13□□□□□ -0.95
LIMK1-201ENST00000336180 Q6ZTI0 123 aa9.13□□□□□ -0.95
LIMK1-201ENST00000336180 TOMM6Q96B49 74 aa9.13□□□□□ -0.95
LIMK1-201ENST00000336180 H3BRM9 83 aa9.12□□□□□ -0.95
LIMK1-201ENST00000336180 LINC00482Q8N8I6 264 aa9.12□□□□□ -0.95
LIMK1-201ENST00000336180 NOP10Q9NPE3 64 aaKnown RBP9.12□□□□□ -0.95
LIMK1-201ENST00000336180 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
LIMK1-201ENST00000336180 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.11□□□□□ -0.95
LIMK1-201ENST00000336180 IGKV2-29A2NJV5 120 aaPredicted RBP9.11□□□□□ -0.95
LIMK1-201ENST00000336180 VCYO14598 125 aa9.11□□□□□ -0.95
LIMK1-201ENST00000336180 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
LIMK1-201ENST00000336180 GCSHP23434 173 aa9.11□□□□□ -0.95
LIMK1-201ENST00000336180 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
LIMK1-201ENST00000336180 ZFAND6Q6FIF0 208 aa9.11□□□□□ -0.95
LIMK1-201ENST00000336180 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
LIMK1-201ENST00000336180 SEC11AP67812 179 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 CFAP126Q5VTH2 177 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 C11orf72Q8NBR9 251 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 MAST4O15021 2626 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 K7ERJ3 54 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 M0R2P5 195 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 DEFB4AO15263 64 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 SEC61GP60059 68 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
LIMK1-201ENST00000336180 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 C16orf95Q9H693 158 aa9.1□□□□□ -0.95
LIMK1-201ENST00000336180 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
LIMK1-201ENST00000336180 GIG44P09565 113 aaPredicted RBP9.09□□□□□ -0.95
LIMK1-201ENST00000336180 MEIG1Q5JSS6 88 aa9.09□□□□□ -0.95
LIMK1-201ENST00000336180 TMEM170BQ5T4T1 132 aa9.09□□□□□ -0.95
LIMK1-201ENST00000336180 FBN1P35555 2871 aaKnown RBP9.09□□□□□ -0.95
LIMK1-201ENST00000336180 A6NDN8 102 aa9.09□□□□□ -0.96
LIMK1-201ENST00000336180 F8VRH5 84 aa9.09□□□□□ -0.96
LIMK1-201ENST00000336180 H7C1H1 209 aa9.09□□□□□ -0.96
LIMK1-201ENST00000336180 FAM19A5Q7Z5A7 132 aaPredicted RBP9.09□□□□□ -0.96
LIMK1-201ENST00000336180 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.96
LIMK1-201ENST00000336180 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
LIMK1-201ENST00000336180 ZMAT4Q9H898 229 aa9.08□□□□□ -0.96
LIMK1-201ENST00000336180 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
LIMK1-201ENST00000336180 IGLV1-51P01701 117 aa9.08□□□□□ -0.96
LIMK1-201ENST00000336180 LINC00694P0DN24 101 aa9.08□□□□□ -0.96
LIMK1-201ENST00000336180 PKD1L1Q8TDX9 2849 aa9.08□□□□□ -0.96
LIMK1-201ENST00000336180 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
LIMK1-201ENST00000336180 ZNRF2Q8NHG8 242 aa9.07□□□□□ -0.96
LIMK1-201ENST00000336180 IGIPA6NJ69 53 aa9.07□□□□□ -0.96
LIMK1-201ENST00000336180 TRBV27A0A0K0K1C4 114 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms