RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 LINC01546A6NGU7 62 aa6.86□□□□□ -1.31
NLRP3-201ENST00000336119 ATXN8Q156A1 80 aa6.86□□□□□ -1.31
NLRP3-201ENST00000336119 ANKRD17O75179 2603 aaKnown RBP6.86□□□□□ -1.31
NLRP3-201ENST00000336119 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
NLRP3-201ENST00000336119 NXPH4O95158 308 aa6.86□□□□□ -1.31
NLRP3-201ENST00000336119 SETD2Q9BYW2 2564 aaPredicted RBP6.85□□□□□ -1.31
NLRP3-201ENST00000336119 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 TRBV7-3A0A075B6L6 115 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 LOC400499M0QZD8 3231 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 P0DMU3 169 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 FAM231AP0DMU4 169 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 FAM231CP0DMU5 169 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 DAZ2Q13117 558 aaKnown RBP6.85□□□□□ -1.31
NLRP3-201ENST00000336119 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
NLRP3-201ENST00000336119 OR13C6PQ8NH95 151 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 C16orf74Q96GX8 76 aa6.85□□□□□ -1.31
NLRP3-201ENST00000336119 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
NLRP3-201ENST00000336119 C9JAW5 83 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 K7EQD1 137 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 CRYBA4P53673 196 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
NLRP3-201ENST00000336119 CFC1BP0CG36 223 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 CFC1P0CG37 223 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 LINC00158P58513 81 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 FAM19A4Q96LR4 140 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 A4D1N5 150 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 DNAL4O96015 105 aa6.84□□□□□ -1.31
NLRP3-201ENST00000336119 DCHS1Q96JQ0 3298 aa6.84□□□□□ -1.32
NLRP3-201ENST00000336119 F8P00451 2351 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 IGLV4-3A0A075B6K6 122 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 HTN3P15516 51 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 TMEM263Q8WUH6 116 aaKnown RBP6.83□□□□□ -1.32
NLRP3-201ENST00000336119 IGIPA6NJ69 53 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 MUSTN1Q8IVN3 82 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 C10orf126Q8N4M7 172 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 ACANP16112 2415 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 TSHBP01222 138 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 GAGE6Q13070 117 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 PIK3CD-AS1Q5SR53 167 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 CFAP126Q5VTH2 177 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 CFAP161Q6P656 301 aa6.83□□□□□ -1.32
NLRP3-201ENST00000336119 PYGO1Q9Y3Y4 419 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 A0A0J9YY99 117 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 TEX48A0A1B0GUV7 120 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 IGHV3-30-3P0DP02 117 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 IFITM1P13164 125 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 ZNF22P17026 224 aaPredicted RBP6.82□□□□□ -1.32
NLRP3-201ENST00000336119 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
NLRP3-201ENST00000336119 SLC25A29Q8N8R3 303 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 PPDPFLQ8WWR9 84 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 WFDC2Q14508 124 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 C2orf82Q6UX34 121 aa6.82□□□□□ -1.32
NLRP3-201ENST00000336119 PROK1P58294 105 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 SS18Q15532 418 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 GTSF1LQ9H1H1 148 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 TRAV4A0A0B4J268 109 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 TMEM223A0PJW6 202 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 RBMY1BA6NDE4 496 aaKnown RBP6.81□□□□□ -1.32
NLRP3-201ENST00000336119 RBMY1EA6NEQ0 496 aaKnown RBP6.81□□□□□ -1.32
NLRP3-201ENST00000336119 RBMY1DP0C7P1 496 aaKnown RBP6.81□□□□□ -1.32
NLRP3-201ENST00000336119 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
NLRP3-201ENST00000336119 RBMY1CP0DJD4 496 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 NFE4Q86UQ8 179 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 FLNCQ14315 2725 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 LAMA5O15230 3695 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 RS1O15537 224 aa6.81□□□□□ -1.32
NLRP3-201ENST00000336119 SPANXB1Q9NS25 103 aaPredicted RBP6.81□□□□□ -1.32
NLRP3-201ENST00000336119 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 MALP21145 153 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 SH2D6Q7Z4S9 175 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 NDUFA11Q86Y39 141 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 Q9H8V8 135 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 AGRNO00468 2067 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 CRPP02741 224 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 Q6ZUT4 128 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 VSIG2Q96IQ7 327 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 KALRNO60229 2985 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 TRAV8-3A0A0A6YYJ7 113 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 Q6ZTI0 123 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 ZZEF1O43149 2961 aa6.8□□□□□ -1.32
NLRP3-201ENST00000336119 ITPR1Q14643 2758 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 SLC25A20O43772 301 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 LINC01006Q8NI28 216 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 LINC00467Q9BRT7 94 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 APOC4P55056 127 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 LINC00315P59091 139 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 CKS1BP61024 79 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 A0A1B0GV72 72 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 PAX4O43316 350 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 PRM2P04554 102 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
NLRP3-201ENST00000336119 HERV-K104P63124 156 aa6.79□□□□□ -1.32
NLRP3-201ENST00000336119 HIST2H2BDQ6DRA6 164 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms