RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RS1O15537 224 aa11.8□□□□□ -0.52
HDAC5-202ENST00000336057 MIAQ16674 131 aa11.8□□□□□ -0.52
HDAC5-202ENST00000336057 Q8N976 141 aa11.8□□□□□ -0.52
HDAC5-202ENST00000336057 CITED2Q99967 270 aaPredicted RBP11.8□□□□□ -0.52
HDAC5-202ENST00000336057 A0A0B4J2C4 111 aa11.79□□□□□ -0.52
HDAC5-202ENST00000336057 MYO18BQ8IUG5 2567 aa11.79□□□□□ -0.52
HDAC5-202ENST00000336057 M0QY20 66 aa11.78□□□□□ -0.52
HDAC5-202ENST00000336057 Q6YL49 198 aa11.78□□□□□ -0.52
HDAC5-202ENST00000336057 URB1-AS1Q96HZ7 61 aa11.78□□□□□ -0.52
HDAC5-202ENST00000336057 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
HDAC5-202ENST00000336057 ZNF22P17026 224 aaPredicted RBP11.78□□□□□ -0.52
HDAC5-202ENST00000336057 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.52
HDAC5-202ENST00000336057 IGLV4-3A0A075B6K6 122 aa11.77□□□□□ -0.53
HDAC5-202ENST00000336057 PRR9Q5T870 116 aa11.77□□□□□ -0.53
HDAC5-202ENST00000336057 CNFNQ9BYD5 112 aa11.77□□□□□ -0.53
HDAC5-202ENST00000336057 MRPS12O15235 138 aaKnown RBP11.77□□□□□ -0.53
HDAC5-202ENST00000336057 GAS8-AS1O95177 125 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 ESM1Q9NQ30 184 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 TMEM223A0PJW6 202 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
HDAC5-202ENST00000336057 TRACP01848 142 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 SPANXB1Q9NS25 103 aaPredicted RBP11.76□□□□□ -0.53
HDAC5-202ENST00000336057 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 Q6ZTI0 123 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
HDAC5-202ENST00000336057 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 CLPSL1A2RUU4 121 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 RMI2Q96E14 147 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 DNAJC9-AS1A6NH13 148 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 HIVEP3Q5T1R4 2406 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 LINC00467Q9BRT7 94 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
HDAC5-202ENST00000336057 TRBV6-5A0A0K0K1A5 114 aa11.74□□□□□ -0.53
HDAC5-202ENST00000336057 CDKN2A-AS1Q9UH64 79 aa11.74□□□□□ -0.53
HDAC5-202ENST00000336057 LECT2O14960 151 aa11.74□□□□□ -0.53
HDAC5-202ENST00000336057 C1orf43Q9BWL3 253 aa11.74□□□□□ -0.53
HDAC5-202ENST00000336057 IGHV4-31P0DP07 118 aa11.73□□□□□ -0.53
HDAC5-202ENST00000336057 PSMB8P28062 276 aa11.73□□□□□ -0.53
HDAC5-202ENST00000336057 CAMK2N2Q96S95 79 aa11.73□□□□□ -0.53
HDAC5-202ENST00000336057 RBMY1FQ15415 496 aaKnown RBP11.73□□□□□ -0.53
HDAC5-202ENST00000336057 CDSNQ15517 529 aa11.73□□□□□ -0.53
HDAC5-202ENST00000336057 RBX1P62877 108 aa11.72□□□□□ -0.53
HDAC5-202ENST00000336057 KLLNB2CW77 178 aa11.72□□□□□ -0.53
HDAC5-202ENST00000336057 CEP295Q9C0D2 2601 aa11.72□□□□□ -0.53
HDAC5-202ENST00000336057 CXCL5P42830 114 aa11.72□□□□□ -0.53
HDAC5-202ENST00000336057 CITED1Q99966 193 aa11.72□□□□□ -0.53
HDAC5-202ENST00000336057 PRO0255Q9UI72 69 aa11.71□□□□□ -0.53
HDAC5-202ENST00000336057 DEFB135Q30KP9 77 aa11.71□□□□□ -0.53
HDAC5-202ENST00000336057 SS18L2Q9UHA2 77 aa11.71□□□□□ -0.53
HDAC5-202ENST00000336057 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.54
HDAC5-202ENST00000336057 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.54
HDAC5-202ENST00000336057 CFAP126Q5VTH2 177 aa11.71□□□□□ -0.54
HDAC5-202ENST00000336057 LRRC75A-AS1Q8N1F1 130 aa11.71□□□□□ -0.54
HDAC5-202ENST00000336057 IGHV3-30P01768 117 aa11.7□□□□□ -0.54
HDAC5-202ENST00000336057 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
HDAC5-202ENST00000336057 IGHV3-30-5P0DP03 117 aa11.7□□□□□ -0.54
HDAC5-202ENST00000336057 DNAH12Q6ZR08 3092 aa11.7□□□□□ -0.54
HDAC5-202ENST00000336057 CDK2AP2O75956 126 aa11.7□□□□□ -0.54
HDAC5-202ENST00000336057 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
HDAC5-202ENST00000336057 Q9HAA7 133 aa11.69□□□□□ -0.54
HDAC5-202ENST00000336057 DEFB4AO15263 64 aa11.69□□□□□ -0.54
HDAC5-202ENST00000336057 IGKV3D-7A0A0C4DH55 119 aa11.69□□□□□ -0.54
HDAC5-202ENST00000336057 IGLV1-40P01703 118 aa11.69□□□□□ -0.54
HDAC5-202ENST00000336057 PYGO1Q9Y3Y4 419 aa11.69□□□□□ -0.54
HDAC5-202ENST00000336057 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
HDAC5-202ENST00000336057 PROK1P58294 105 aa11.68□□□□□ -0.54
HDAC5-202ENST00000336057 JMJD7-PLA2G4BH0Y9G9 81 aa11.68□□□□□ -0.54
HDAC5-202ENST00000336057 Q6ZS46 218 aa11.68□□□□□ -0.54
HDAC5-202ENST00000336057 HIST2H2BDQ6DRA6 164 aa11.68□□□□□ -0.54
HDAC5-202ENST00000336057 SPANXCQ9NY87 97 aa11.68□□□□□ -0.54
HDAC5-202ENST00000336057 TSHBP01222 138 aa11.67□□□□□ -0.54
HDAC5-202ENST00000336057 SPAG11BQ08648 103 aa11.67□□□□□ -0.54
HDAC5-202ENST00000336057 ABCA2Q9BZC7 2435 aa11.67□□□□□ -0.54
HDAC5-202ENST00000336057 NDUFA1O15239 70 aa11.67□□□□□ -0.54
HDAC5-202ENST00000336057 ATOX1O00244 68 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 DCANP1Q8TF63 244 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 NCR3O14931 201 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 F8W735 103 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-202ENST00000336057 INSL3P51460 131 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 TIRAPP58753 221 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 CRYGDP07320 174 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 PSMG3-AS1Q96PY0 264 aa11.66□□□□□ -0.54
HDAC5-202ENST00000336057 DEFB105AQ8NG35 78 aa11.65□□□□□ -0.54
HDAC5-202ENST00000336057 KLK12Q9UKR0 248 aa11.65□□□□□ -0.54
HDAC5-202ENST00000336057 LINC00308Q8TCZ7 52 aa11.65□□□□□ -0.54
HDAC5-202ENST00000336057 MT-ATP8P03928 68 aa11.65□□□□□ -0.55
HDAC5-202ENST00000336057 COX8CQ7Z4L0 72 aa11.65□□□□□ -0.55
HDAC5-202ENST00000336057 TRBV30A0A0K0K1B3 111 aa11.64□□□□□ -0.55
HDAC5-202ENST00000336057 TRIAP1O43715 76 aa11.64□□□□□ -0.55
HDAC5-202ENST00000336057 Q6ZSV7 163 aa11.64□□□□□ -0.55
HDAC5-202ENST00000336057 ZNF702PQ9H963 129 aa11.64□□□□□ -0.55
HDAC5-202ENST00000336057 A0A1B0GX51 115 aa11.64□□□□□ -0.55
HDAC5-202ENST00000336057 ANKRD11Q6UB99 2663 aaPredicted RBP11.63□□□□□ -0.55
HDAC5-202ENST00000336057 H7C423 109 aa11.63□□□□□ -0.55
HDAC5-202ENST00000336057 H3BQ85 93 aa11.63□□□□□ -0.55
HDAC5-202ENST00000336057 RPL18AQ02543 176 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms