RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
LRCH3-201ENST00000334859 LEPROTO15243 131 aa12.88□□□□□ -0.35
LRCH3-201ENST00000334859 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
LRCH3-201ENST00000334859 MTURNQ8N3F0 131 aa12.88□□□□□ -0.35
LRCH3-201ENST00000334859 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
LRCH3-201ENST00000334859 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
LRCH3-201ENST00000334859 RNASE13Q5GAN3 156 aaKnown RBP12.88□□□□□ -0.35
LRCH3-201ENST00000334859 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
LRCH3-201ENST00000334859 SPANXB1Q9NS25 103 aaPredicted RBP12.88□□□□□ -0.35
LRCH3-201ENST00000334859 IGHV3OR16-12A0A075B7B8 117 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 F8W1H4 67 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 WFDC2Q14508 124 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 TEX29Q8N6K0 151 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 IGHV3-30P01768 117 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 IGHV3-30-5P0DP03 117 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 STHQ8IWL8 128 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 PYGO1Q9Y3Y4 419 aa12.87□□□□□ -0.35
LRCH3-201ENST00000334859 TSPAN13O95857 204 aa12.86□□□□□ -0.35
LRCH3-201ENST00000334859 NIPBLQ6KC79 2804 aaeCLIP12.86□□□□□ -0.35
LRCH3-201ENST00000334859 LOC107984156A0A0G2JMH3 177 aa12.86□□□□□ -0.35
LRCH3-201ENST00000334859 HIST2H2BCQ6DN03 193 aa12.86□□□□□ -0.35
LRCH3-201ENST00000334859 ARL17AQ8IVW1 177 aa12.86□□□□□ -0.35
LRCH3-201ENST00000334859 SPXQ9BT56 116 aa12.86□□□□□ -0.35
LRCH3-201ENST00000334859 ESM1Q9NQ30 184 aa12.86□□□□□ -0.35
LRCH3-201ENST00000334859 IGHV3-38A0A0C4DH36 116 aa12.85□□□□□ -0.35
LRCH3-201ENST00000334859 CCL24O00175 119 aa12.85□□□□□ -0.35
LRCH3-201ENST00000334859 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
LRCH3-201ENST00000334859 NDUFA11Q86Y39 141 aa12.85□□□□□ -0.35
LRCH3-201ENST00000334859 PTH2Q96A98 100 aa12.85□□□□□ -0.35
LRCH3-201ENST00000334859 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
LRCH3-201ENST00000334859 CUBNO60494 3623 aa12.84□□□□□ -0.35
LRCH3-201ENST00000334859 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-201ENST00000334859 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-201ENST00000334859 FAM104AQ969W3 186 aa12.84□□□□□ -0.35
LRCH3-201ENST00000334859 IGHV3-53P01767 116 aa12.83□□□□□ -0.35
LRCH3-201ENST00000334859 AZU1P20160 251 aa12.83□□□□□ -0.35
LRCH3-201ENST00000334859 CHCHD7Q9BUK0 85 aa12.83□□□□□ -0.35
LRCH3-201ENST00000334859 MTORP42345 2549 aa12.83□□□□□ -0.35
LRCH3-201ENST00000334859 ACANP16112 2415 aa12.83□□□□□ -0.36
LRCH3-201ENST00000334859 FHL3Q13643 280 aa12.83□□□□□ -0.36
LRCH3-201ENST00000334859 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.36
LRCH3-201ENST00000334859 JMJD1CQ15652 2540 aa12.83□□□□□ -0.36
LRCH3-201ENST00000334859 TRAV25A0A0B4J276 109 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 BEAN1Q3B7T3 259 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 CFC1BP0CG36 223 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 CFC1P0CG37 223 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 MRPS36P82909 103 aaKnown RBP12.82□□□□□ -0.36
LRCH3-201ENST00000334859 COTL1Q14019 142 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 ETDBQ3ZM63 59 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 CITED2Q99967 270 aaPredicted RBP12.82□□□□□ -0.36
LRCH3-201ENST00000334859 SPANXA1Q9NS26 97 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
LRCH3-201ENST00000334859 SETXQ7Z333 2677 aaKnown RBP12.81□□□□□ -0.36
LRCH3-201ENST00000334859 RS1O15537 224 aa12.81□□□□□ -0.36
LRCH3-201ENST00000334859 SH2D6Q7Z4S9 175 aa12.81□□□□□ -0.36
LRCH3-201ENST00000334859 UBE2D4Q9Y2X8 147 aa12.81□□□□□ -0.36
LRCH3-201ENST00000334859 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
LRCH3-201ENST00000334859 IGHV3-30-3P0DP02 117 aa12.81□□□□□ -0.36
LRCH3-201ENST00000334859 CRYBA4P53673 196 aa12.81□□□□□ -0.36
LRCH3-201ENST00000334859 PRO0461Q9UI25 63 aa12.81□□□□□ -0.36
LRCH3-201ENST00000334859 TRGV1A0A0A0MS02 117 aa12.8□□□□□ -0.36
LRCH3-201ENST00000334859 PSMB2P49721 201 aa12.8□□□□□ -0.36
LRCH3-201ENST00000334859 Q6ZUT4 128 aa12.8□□□□□ -0.36
LRCH3-201ENST00000334859 C10orf126Q8N4M7 172 aa12.8□□□□□ -0.36
LRCH3-201ENST00000334859 DNAJC30Q96LL9 226 aa12.8□□□□□ -0.36
LRCH3-201ENST00000334859 TRAV8-3A0A0A6YYJ7 113 aa12.79□□□□□ -0.36
LRCH3-201ENST00000334859 C1orf158Q8N1D5 194 aa12.79□□□□□ -0.36
LRCH3-201ENST00000334859 CLUHP3Q96NS8 147 aa12.79□□□□□ -0.36
LRCH3-201ENST00000334859 TMEM238C9JI98 176 aa12.79□□□□□ -0.36
LRCH3-201ENST00000334859 LYRM7Q5U5X0 104 aa12.79□□□□□ -0.36
LRCH3-201ENST00000334859 A4D1N5 150 aa12.78□□□□□ -0.36
LRCH3-201ENST00000334859 UBE2D3P61077 147 aa12.78□□□□□ -0.36
LRCH3-201ENST00000334859 UBE2D2P62837 147 aa12.78□□□□□ -0.36
LRCH3-201ENST00000334859 PRO1854Q9UHT4 67 aa12.78□□□□□ -0.36
LRCH3-201ENST00000334859 A0A0J9YXY3 114 aa12.77□□□□□ -0.36
LRCH3-201ENST00000334859 YAE1D1Q9NRH1 226 aa12.77□□□□□ -0.36
LRCH3-201ENST00000334859 TSSC4Q9Y5U2 329 aaPredicted RBP12.77□□□□□ -0.37
LRCH3-201ENST00000334859 ITPR2Q14571 2701 aa12.77□□□□□ -0.37
LRCH3-201ENST00000334859 TINCRA0A1B0GVN0 87 aa12.76□□□□□ -0.37
LRCH3-201ENST00000334859 SPINK8P0C7L1 97 aa12.76□□□□□ -0.37
LRCH3-201ENST00000334859 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
LRCH3-201ENST00000334859 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
LRCH3-201ENST00000334859 J3QR89 54 aa12.76□□□□□ -0.37
LRCH3-201ENST00000334859 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
LRCH3-201ENST00000334859 GEMIN7Q9H840 131 aaKnown RBP12.76□□□□□ -0.37
LRCH3-201ENST00000334859 PDZD2O15018 2839 aa12.75□□□□□ -0.37
LRCH3-201ENST00000334859 DGAT2L7PQ6IED9 249 aa12.75□□□□□ -0.37
LRCH3-201ENST00000334859 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
LRCH3-201ENST00000334859 Q6ZTI0 123 aa12.74□□□□□ -0.37
LRCH3-201ENST00000334859 IL17DQ8TAD2 202 aa12.74□□□□□ -0.37
LRCH3-201ENST00000334859 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
LRCH3-201ENST00000334859 H7C2G1 150 aa12.74□□□□□ -0.37
LRCH3-201ENST00000334859 A8MZ25 164 aa12.73□□□□□ -0.37
LRCH3-201ENST00000334859 SCGB1C2P0DMR2 95 aa12.73□□□□□ -0.37
LRCH3-201ENST00000334859 KRTAP1-1Q07627 177 aa12.73□□□□□ -0.37
LRCH3-201ENST00000334859 TMEM263Q8WUH6 116 aaKnown RBP12.73□□□□□ -0.37
LRCH3-201ENST00000334859 VSIG2Q96IQ7 327 aa12.73□□□□□ -0.37
LRCH3-201ENST00000334859 TCL1BO95988 128 aa12.73□□□□□ -0.37
LRCH3-201ENST00000334859 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
LRCH3-201ENST00000334859 EIF4EBP3O60516 100 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms