RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 G3V4G9 280 aa12.84□□□□□ -0.35
TRAPPC11-201ENST00000334690 ZMAT4Q9H898 229 aa12.84□□□□□ -0.35
TRAPPC11-201ENST00000334690 MIAQ16674 131 aa12.84□□□□□ -0.35
TRAPPC11-201ENST00000334690 CEMP1Q6PRD7 247 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC11-201ENST00000334690 MIR7-3HGQ8N6C7 128 aa12.84□□□□□ -0.35
TRAPPC11-201ENST00000334690 DNAJC9-AS1A6NH13 148 aa12.84□□□□□ -0.35
TRAPPC11-201ENST00000334690 Q9HAA7 133 aa12.84□□□□□ -0.35
TRAPPC11-201ENST00000334690 TRACP01848 142 aa12.83□□□□□ -0.35
TRAPPC11-201ENST00000334690 A0A0B4J2C4 111 aa12.83□□□□□ -0.36
TRAPPC11-201ENST00000334690 A0A0J9YXY3 114 aa12.83□□□□□ -0.36
TRAPPC11-201ENST00000334690 PTPRSQ13332 1948 aa12.83□□□□□ -0.36
TRAPPC11-201ENST00000334690 DEFB114Q30KQ6 69 aa12.82□□□□□ -0.36
TRAPPC11-201ENST00000334690 DEFB135Q30KP9 77 aa12.82□□□□□ -0.36
TRAPPC11-201ENST00000334690 ESM1Q9NQ30 184 aa12.82□□□□□ -0.36
TRAPPC11-201ENST00000334690 SETD2Q9BYW2 2564 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC11-201ENST00000334690 H3BQ85 93 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 NDUFA1O15239 70 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 ABCA12Q86UK0 2595 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 RS1O15537 224 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 B5MCH6 92 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 JMJD7-PLA2G4BH0Y9G9 81 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 P0DMU3 169 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 DOPEY1Q5JWR5 2465 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 Q6ZTI0 123 aa12.81□□□□□ -0.36
TRAPPC11-201ENST00000334690 IGKV2D-26A0A0A0MRZ7 120 aa12.8□□□□□ -0.36
TRAPPC11-201ENST00000334690 LECT2O14960 151 aa12.8□□□□□ -0.36
TRAPPC11-201ENST00000334690 M0QY20 66 aa12.8□□□□□ -0.36
TRAPPC11-201ENST00000334690 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
TRAPPC11-201ENST00000334690 TRBV27A0A0K0K1C4 114 aa12.8□□□□□ -0.36
TRAPPC11-201ENST00000334690 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
TRAPPC11-201ENST00000334690 CLEC2BQ92478 149 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 IGLV4-3A0A075B6K6 122 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 TRBV6-5A0A0K0K1A5 114 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 ETDCA0A1B0GVM5 59 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 IGHV3-30P01768 117 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 IGHV3-33P01772 117 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 IGHV3-30-5P0DP03 117 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 CCL18P55774 89 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 PTH2Q96A98 100 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 TP73-AS1Q9UF72 201 aa12.79□□□□□ -0.36
TRAPPC11-201ENST00000334690 NFE4Q86UQ8 179 aa12.78□□□□□ -0.36
TRAPPC11-201ENST00000334690 CDKN2A-AS1Q9UH64 79 aa12.78□□□□□ -0.36
TRAPPC11-201ENST00000334690 FUSP35637 526 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC11-201ENST00000334690 TCL1BO95988 128 aa12.78□□□□□ -0.36
TRAPPC11-201ENST00000334690 SPANXB1Q9NS25 103 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC11-201ENST00000334690 ZFYVE26Q68DK2 2539 aa12.77□□□□□ -0.36
TRAPPC11-201ENST00000334690 JMJD1CQ15652 2540 aa12.77□□□□□ -0.36
TRAPPC11-201ENST00000334690 CNFNQ9BYD5 112 aa12.77□□□□□ -0.37
TRAPPC11-201ENST00000334690 KLK12Q9UKR0 248 aa12.77□□□□□ -0.37
TRAPPC11-201ENST00000334690 PSMB8P28062 276 aa12.76□□□□□ -0.37
TRAPPC11-201ENST00000334690 UBE2BP63146 152 aa12.76□□□□□ -0.37
TRAPPC11-201ENST00000334690 NRACQ8N912 160 aa12.76□□□□□ -0.37
TRAPPC11-201ENST00000334690 IGHV4-4A0A075B6R2 117 aa12.76□□□□□ -0.37
TRAPPC11-201ENST00000334690 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
TRAPPC11-201ENST00000334690 LINC00467Q9BRT7 94 aa12.76□□□□□ -0.37
TRAPPC11-201ENST00000334690 ATOX1O00244 68 aa12.76□□□□□ -0.37
TRAPPC11-201ENST00000334690 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
TRAPPC11-201ENST00000334690 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
TRAPPC11-201ENST00000334690 TMEM223A0PJW6 202 aa12.75□□□□□ -0.37
TRAPPC11-201ENST00000334690 RNASE3P12724 160 aaKnown RBP12.75□□□□□ -0.37
TRAPPC11-201ENST00000334690 hADV29S1A0JD25 119 aa12.74□□□□□ -0.37
TRAPPC11-201ENST00000334690 KLLNB2CW77 178 aa12.74□□□□□ -0.37
TRAPPC11-201ENST00000334690 HIST2H2BDQ6DRA6 164 aa12.74□□□□□ -0.37
TRAPPC11-201ENST00000334690 PYGO1Q9Y3Y4 419 aa12.74□□□□□ -0.37
TRAPPC11-201ENST00000334690 TNRC6BQ9UPQ9 1833 aaKnown RBP12.74□□□□□ -0.37
TRAPPC11-201ENST00000334690 SMIM9A6NGZ8 99 aa12.74□□□□□ -0.37
TRAPPC11-201ENST00000334690 LINC00310P59036 64 aa12.74□□□□□ -0.37
TRAPPC11-201ENST00000334690 DEFB4AO15263 64 aa12.73□□□□□ -0.37
TRAPPC11-201ENST00000334690 RPL18AQ02543 176 aaKnown RBP12.73□□□□□ -0.37
TRAPPC11-201ENST00000334690 DEFB105AQ8NG35 78 aa12.73□□□□□ -0.37
TRAPPC11-201ENST00000334690 FAM236AA0A1B0GUQ0 79 aa12.73□□□□□ -0.37
TRAPPC11-201ENST00000334690 FAM236BA0A1B0GV22 79 aa12.73□□□□□ -0.37
TRAPPC11-201ENST00000334690 MRAPQ8TCY5 172 aa12.73□□□□□ -0.37
TRAPPC11-201ENST00000334690 H7C423 109 aa12.73□□□□□ -0.37
TRAPPC11-201ENST00000334690 PSMG3-AS1Q96PY0 264 aa12.72□□□□□ -0.37
TRAPPC11-201ENST00000334690 CFAP126Q5VTH2 177 aa12.72□□□□□ -0.37
TRAPPC11-201ENST00000334690 IGKV3D-7A0A0C4DH55 119 aa12.72□□□□□ -0.37
TRAPPC11-201ENST00000334690 TIRAPP58753 221 aa12.72□□□□□ -0.37
TRAPPC11-201ENST00000334690 Q6ZSV7 163 aa12.72□□□□□ -0.37
TRAPPC11-201ENST00000334690 C2orf91Q6ZV80 131 aa12.72□□□□□ -0.37
TRAPPC11-201ENST00000334690 TMEM256-PLSCR3K7ERE1 68 aa12.71□□□□□ -0.37
TRAPPC11-201ENST00000334690 DIRC1Q969H9 104 aa12.71□□□□□ -0.37
TRAPPC11-201ENST00000334690 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.37
TRAPPC11-201ENST00000334690 POLR2KP53803 58 aaKnown RBP12.71□□□□□ -0.38
TRAPPC11-201ENST00000334690 PRR9Q5T870 116 aa12.71□□□□□ -0.38
TRAPPC11-201ENST00000334690 IGLV1-40P01703 118 aa12.71□□□□□ -0.38
TRAPPC11-201ENST00000334690 MRPS12O15235 138 aaKnown RBP12.7□□□□□ -0.38
TRAPPC11-201ENST00000334690 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
TRAPPC11-201ENST00000334690 LINC00643Q86TS7 51 aa12.7□□□□□ -0.38
TRAPPC11-201ENST00000334690 A0A1B0GX51 115 aa12.69□□□□□ -0.38
TRAPPC11-201ENST00000334690 LYRM9A8MSI8 78 aa12.69□□□□□ -0.38
TRAPPC11-201ENST00000334690 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
TRAPPC11-201ENST00000334690 PDE6GP18545 87 aa12.69□□□□□ -0.38
TRAPPC11-201ENST00000334690 RBM3P98179 157 aaKnown RBP12.69□□□□□ -0.38
TRAPPC11-201ENST00000334690 NCR3O14931 201 aa12.69□□□□□ -0.38
TRAPPC11-201ENST00000334690 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
TRAPPC11-201ENST00000334690 TRBV6-4A0A1B0GX49 114 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms