RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 HERVK_113P61574 105 aa6.52□□□□□ -1.37
TREM1-202ENST00000334475 ZNF124Q15973 351 aa6.52□□□□□ -1.37
TREM1-202ENST00000334475 GTSCR1Q86UQ5 136 aa6.52□□□□□ -1.37
TREM1-202ENST00000334475 NDUFA11Q86Y39 141 aa6.52□□□□□ -1.37
TREM1-202ENST00000334475 OR11H2Q8NH07 326 aa6.52□□□□□ -1.37
TREM1-202ENST00000334475 A0A1W2PRX2 142 aa6.51□□□□□ -1.37
TREM1-202ENST00000334475 H3BRM9 83 aa6.51□□□□□ -1.37
TREM1-202ENST00000334475 TSHBP01222 138 aa6.51□□□□□ -1.37
TREM1-202ENST00000334475 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
TREM1-202ENST00000334475 IL17DQ8TAD2 202 aa6.51□□□□□ -1.37
TREM1-202ENST00000334475 C1QTNF4Q9BXJ3 329 aa6.51□□□□□ -1.37
TREM1-202ENST00000334475 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
TREM1-202ENST00000334475 NACAE9PAV3 2078 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 TRBV25-1A0A075B6N4 114 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 C11orf86A6NJI1 115 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 CIDEAO60543 219 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 SAP30O75446 220 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 IGHV3-53P01767 116 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 CFAP126Q5VTH2 177 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 NEGR1Q7Z3B1 354 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 C11orf44Q8N8P7 122 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 TMEM263Q8WUH6 116 aaKnown RBP6.5□□□□□ -1.37
TREM1-202ENST00000334475 CHAC1Q9BUX1 264 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 TNFRSF18Q9Y5U5 241 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 RYR3Q15413 4870 aa6.5□□□□□ -1.37
TREM1-202ENST00000334475 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
TREM1-202ENST00000334475 HTN1P15515 57 aa6.49□□□□□ -1.37
TREM1-202ENST00000334475 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
TREM1-202ENST00000334475 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
TREM1-202ENST00000334475 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
TREM1-202ENST00000334475 TM2D2Q9BX73 214 aa6.49□□□□□ -1.37
TREM1-202ENST00000334475 CST9LQ9H4G1 147 aa6.49□□□□□ -1.37
TREM1-202ENST00000334475 KMT2CQ8NEZ4 4911 aaKnown RBP6.48□□□□□ -1.37
TREM1-202ENST00000334475 MYMXA0A1B0GTQ4 84 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 P0DMU3 169 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 FAM231AP0DMU4 169 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 FAM231CP0DMU5 169 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 RPL39P62891 51 aaKnown RBP6.48□□□□□ -1.37
TREM1-202ENST00000334475 RNASE8Q8TDE3 154 aaKnown RBP6.48□□□□□ -1.37
TREM1-202ENST00000334475 C16orf74Q96GX8 76 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 SPANXA1Q9NS26 97 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 XCL2Q9UBD3 114 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 VWFP04275 2813 aa6.48□□□□□ -1.37
TREM1-202ENST00000334475 TRAV8-6A0A0B4J262 113 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 TRAV4A0A0B4J268 109 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 TRBV10-1A0A0K0K1A3 114 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 C9orf118A6NHY6 69 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 PTTG1IPP53801 180 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 CEND1Q8N111 149 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 PRADC1Q9BSG0 188 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 C19orf73Q9NVV2 129 aa6.47□□□□□ -1.37
TREM1-202ENST00000334475 IGLV4-3A0A075B6K6 122 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 SMIM13P0DJ93 91 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 AZU1P20160 251 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 INSL3P51460 131 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 TCTAP57738 103 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 SMAGPQ0VAQ4 97 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 DAZ2Q13117 558 aaKnown RBP6.46□□□□□ -1.38
TREM1-202ENST00000334475 VAMP3Q15836 100 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 OR4C5Q8NGB2 326 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
TREM1-202ENST00000334475 MRPL16Q9NX20 251 aaKnown RBP6.46□□□□□ -1.38
TREM1-202ENST00000334475 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 TRBV7-3A0A075B6L6 115 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 GCSHP23434 173 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 COTL1Q14019 142 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 HIST2H2BDQ6DRA6 164 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 LINC00482Q8N8I6 264 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 AMELXQ99217 191 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 VCX2Q9H322 139 aa6.45□□□□□ -1.38
TREM1-202ENST00000334475 SORL1Q92673 2214 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 IGHV3-73A0A0B4J1V6 119 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 ZNF815PA8K554 130 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 LEPROTO15243 131 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 MRPS36P82909 103 aaKnown RBP6.44□□□□□ -1.38
TREM1-202ENST00000334475 Q6ZVH6 145 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 GTF2H5Q6ZYL4 71 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 PLEKHB2Q96CS7 222 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 OVOL2Q9BRP0 275 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 CHCHD7Q9BUK0 85 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 TTTY13Q9BZ97 58 aa6.44□□□□□ -1.38
TREM1-202ENST00000334475 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
TREM1-202ENST00000334475 IGHV3OR16-12A0A075B7B8 117 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 TRGV1A0A0A0MS02 117 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 TMEM223A0PJW6 202 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 K7EQD1 137 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 CCL25O15444 150 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 FXYD2P54710 66 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 RPL36AP83881 106 aaKnown RBP6.43□□□□□ -1.38
TREM1-202ENST00000334475 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 TMEM170BQ5T4T1 132 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 C9orf66Q5T8R8 295 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 DAZ4Q86SG3 579 aaKnown RBP6.43□□□□□ -1.38
TREM1-202ENST00000334475 ZNRF2Q8NHG8 242 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 RPL36ALQ969Q0 106 aaKnown RBP6.43□□□□□ -1.38
TREM1-202ENST00000334475 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
TREM1-202ENST00000334475 DAZ3Q9NR90 486 aaKnown RBP6.43□□□□□ -1.38
TREM1-202ENST00000334475 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms