RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 M0QY20 66 aa15.03■□□□□ -0
TMEM54-201ENST00000329151 WDR73Q6P4I2 378 aa15.03■□□□□ -0
TMEM54-201ENST00000329151 F2Z2F3 143 aa15.02■□□□□ -0
TMEM54-201ENST00000329151 CEBPGP53567 150 aa15.02■□□□□ -0
TMEM54-201ENST00000329151 RASL11AQ6T310 242 aa15.02■□□□□ -0
TMEM54-201ENST00000329151 PLA2G2DQ9UNK4 145 aa15.02■□□□□ -0
TMEM54-201ENST00000329151 NDUFS6O75380 124 aaKnown RBP15.01□□□□□ -0.01
TMEM54-201ENST00000329151 IGLC6P0CF74 106 aa15□□□□□ -0.01
TMEM54-201ENST00000329151 OCC1Q8TAD7 63 aa15□□□□□ -0.01
TMEM54-201ENST00000329151 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15□□□□□ -0.01
TMEM54-201ENST00000329151 IGHV3-64A0A075B6Q5 118 aa14.99□□□□□ -0.01
TMEM54-201ENST00000329151 DPH3P1Q9H4G8 78 aa14.99□□□□□ -0.01
TMEM54-201ENST00000329151 NIT2Q9NQR4 276 aa14.99□□□□□ -0.01
TMEM54-201ENST00000329151 FAT3Q8TDW7 4589 aa14.98□□□□□ -0.01
TMEM54-201ENST00000329151 A0A1B0GUV1 79 aa14.98□□□□□ -0.01
TMEM54-201ENST00000329151 K7EN84 100 aa14.98□□□□□ -0.01
TMEM54-201ENST00000329151 AMTP48728 403 aa14.98□□□□□ -0.01
TMEM54-201ENST00000329151 COTL1Q14019 142 aa14.98□□□□□ -0.01
TMEM54-201ENST00000329151 SRP19P09132 144 aaKnown RBP14.97□□□□□ -0.01
TMEM54-201ENST00000329151 CNBPP62633 177 aaKnown RBP14.97□□□□□ -0.01
TMEM54-201ENST00000329151 KRTAP26-1Q6PEX3 210 aa14.97□□□□□ -0.01
TMEM54-201ENST00000329151 SDIM1Q6ZPB5 146 aa14.97□□□□□ -0.01
TMEM54-201ENST00000329151 C20orf203Q8NBC4 194 aa14.97□□□□□ -0.01
TMEM54-201ENST00000329151 NUDT10Q8NFP7 164 aa14.97□□□□□ -0.01
TMEM54-201ENST00000329151 NUDT11Q96G61 164 aa14.97□□□□□ -0.01
TMEM54-201ENST00000329151 PGLYRP4Q96LB8 373 aa14.97□□□□□ -0.01
TMEM54-201ENST00000329151 LYZL1Q6UWQ5 148 aa14.96□□□□□ -0.01
TMEM54-201ENST00000329151 SMIM7Q9BQ49 75 aa14.96□□□□□ -0.01
TMEM54-201ENST00000329151 PKHD1L1Q86WI1 4243 aa14.96□□□□□ -0.02
TMEM54-201ENST00000329151 IGLV4-60A0A075B6I1 120 aa14.94□□□□□ -0.02
TMEM54-201ENST00000329151 NTF3P20783 257 aa14.94□□□□□ -0.02
TMEM54-201ENST00000329151 TWIST1Q15672 202 aa14.94□□□□□ -0.02
TMEM54-201ENST00000329151 CFAP161Q6P656 301 aa14.94□□□□□ -0.02
TMEM54-201ENST00000329151 RNASE7Q9H1E1 156 aaKnown RBP14.94□□□□□ -0.02
TMEM54-201ENST00000329151 ZNF727A8MUV8 499 aa14.93□□□□□ -0.02
TMEM54-201ENST00000329151 SMIM15Q7Z3B0 74 aa14.93□□□□□ -0.02
TMEM54-201ENST00000329151 RNF185Q96GF1 192 aa14.93□□□□□ -0.02
TMEM54-201ENST00000329151 RPP21Q9H633 154 aaKnown RBP14.93□□□□□ -0.02
TMEM54-201ENST00000329151 IGKV3OR2-268A0A0C4DH90 116 aa14.92□□□□□ -0.02
TMEM54-201ENST00000329151 PEA15Q15121 130 aa14.92□□□□□ -0.02
TMEM54-201ENST00000329151 AMMECR1LQ6DCA0 310 aa14.92□□□□□ -0.02
TMEM54-201ENST00000329151 PANO1I0J062 215 aa14.91□□□□□ -0.02
TMEM54-201ENST00000329151 HNRNPA3P51991 378 aaKnown RBP14.91□□□□□ -0.02
TMEM54-201ENST00000329151 GFRA4Q9GZZ7 299 aa14.9□□□□□ -0.02
TMEM54-201ENST00000329151 GAGE12HA6NDE8 117 aa14.89□□□□□ -0.03
TMEM54-201ENST00000329151 C9JQL5 133 aa14.89□□□□□ -0.03
TMEM54-201ENST00000329151 GATCO43716 136 aaKnown RBP14.89□□□□□ -0.03
TMEM54-201ENST00000329151 SRSF3P84103 164 aaKnown RBP14.89□□□□□ -0.03
TMEM54-201ENST00000329151 Q6ZRU5 148 aa14.89□□□□□ -0.03
TMEM54-201ENST00000329151 FAM231DQ6ZW35 169 aa14.89□□□□□ -0.03
TMEM54-201ENST00000329151 LINC01551Q86U37 167 aa14.89□□□□□ -0.03
TMEM54-201ENST00000329151 C7orf33Q8WU49 177 aa14.89□□□□□ -0.03
TMEM54-201ENST00000329151 SMDT1Q9H4I9 107 aa14.89□□□□□ -0.03
TMEM54-201ENST00000329151 HMCN2Q8NDA2 5059 aa14.88□□□□□ -0.03
TMEM54-201ENST00000329151 RAB14P61106 215 aa14.88□□□□□ -0.03
TMEM54-201ENST00000329151 FAM74A3Q4VXF1 159 aa14.88□□□□□ -0.03
TMEM54-201ENST00000329151 A0A087WYN8 130 aa14.87□□□□□ -0.03
TMEM54-201ENST00000329151 CHTF8P0CG12 524 aa14.87□□□□□ -0.03
TMEM54-201ENST00000329151 CTRLP40313 264 aa14.87□□□□□ -0.03
TMEM54-201ENST00000329151 CIRBPQ14011 172 aaKnown RBP14.87□□□□□ -0.03
TMEM54-201ENST00000329151 RNASEKQ6P5S7 137 aaKnown RBP14.87□□□□□ -0.03
TMEM54-201ENST00000329151 TMEM241Q24JQ0 296 aa14.86□□□□□ -0.03
TMEM54-201ENST00000329151 APCSP02743 223 aa14.85□□□□□ -0.03
TMEM54-201ENST00000329151 SPACA4Q8TDM5 124 aa14.85□□□□□ -0.03
TMEM54-201ENST00000329151 A8MWL6 223 aa14.84□□□□□ -0.03
TMEM54-201ENST00000329151 RPS10P46783 165 aaKnown RBP14.84□□□□□ -0.03
TMEM54-201ENST00000329151 TRAV26-2A0A0B4J265 109 aa14.83□□□□□ -0.04
TMEM54-201ENST00000329151 NCR2O95944 276 aa14.83□□□□□ -0.04
TMEM54-201ENST00000329151 HIGD2BQ4VC39 106 aa14.83□□□□□ -0.04
TMEM54-201ENST00000329151 CT83Q5H943 113 aa14.83□□□□□ -0.04
TMEM54-201ENST00000329151 GATD1Q8NB37 220 aa14.83□□□□□ -0.04
TMEM54-201ENST00000329151 GTSF1Q8WW33 167 aa14.83□□□□□ -0.04
TMEM54-201ENST00000329151 OSTCQ9NRP0 149 aa14.83□□□□□ -0.04
TMEM54-201ENST00000329151 SLPIP03973 132 aa14.82□□□□□ -0.04
TMEM54-201ENST00000329151 CHCHD10Q8WYQ3 142 aaPredicted RBP14.82□□□□□ -0.04
TMEM54-201ENST00000329151 BTF3L4Q96K17 158 aa14.82□□□□□ -0.04
TMEM54-201ENST00000329151 CNFNQ9BYD5 112 aa14.82□□□□□ -0.04
TMEM54-201ENST00000329151 NAT8Q9UHE5 227 aa14.82□□□□□ -0.04
TMEM54-201ENST00000329151 IGKV2-24A0A0C4DH68 120 aa14.81□□□□□ -0.04
TMEM54-201ENST00000329151 H7C423 109 aa14.81□□□□□ -0.04
TMEM54-201ENST00000329151 RPL23P62829 140 aaKnown RBP14.81□□□□□ -0.04
TMEM54-201ENST00000329151 COX6A2Q02221 97 aa14.81□□□□□ -0.04
TMEM54-201ENST00000329151 MAJINQ3KP22 176 aa14.81□□□□□ -0.04
TMEM54-201ENST00000329151 C15orf56Q8N910 161 aa14.81□□□□□ -0.04
TMEM54-201ENST00000329151 TMEM101Q96IK0 257 aa14.81□□□□□ -0.04
TMEM54-201ENST00000329151 PKIGQ9Y2B9 76 aa14.81□□□□□ -0.04
TMEM54-201ENST00000329151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.8□□□□□ -0.04
TMEM54-201ENST00000329151 IGKV2-29A2NJV5 120 aaPredicted RBP14.8□□□□□ -0.04
TMEM54-201ENST00000329151 ADIRFQ15847 76 aa14.8□□□□□ -0.04
TMEM54-201ENST00000329151 ISOC2Q96AB3 205 aa14.8□□□□□ -0.04
TMEM54-201ENST00000329151 BORCS7Q96B45 105 aa14.8□□□□□ -0.04
TMEM54-201ENST00000329151 PLAC8Q9NZF1 115 aa14.8□□□□□ -0.04
TMEM54-201ENST00000329151 PHOX2AO14813 284 aa14.79□□□□□ -0.04
TMEM54-201ENST00000329151 CLLU1Q5K131 121 aa14.79□□□□□ -0.04
TMEM54-201ENST00000329151 RPL39LQ96EH5 51 aaKnown RBP14.79□□□□□ -0.04
TMEM54-201ENST00000329151 SDHAF1A6NFY7 115 aa14.78□□□□□ -0.04
TMEM54-201ENST00000329151 FGF6P10767 208 aa14.78□□□□□ -0.04
TMEM54-201ENST00000329151 PMCHP20382 165 aa14.78□□□□□ -0.04
TMEM54-201ENST00000329151 IFITM2Q01629 132 aa14.78□□□□□ -0.04
TMEM54-201ENST00000329151 TSKUQ8WUA8 353 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms