RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
PTPMT1-201ENST00000326656 NUDT11Q96G61 164 aa11.39□□□□□ -0.59
PTPMT1-201ENST00000326656 RPL37AP61513 92 aaKnown RBP11.38□□□□□ -0.59
PTPMT1-201ENST00000326656 COTL1Q14019 142 aa11.38□□□□□ -0.59
PTPMT1-201ENST00000326656 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
PTPMT1-201ENST00000326656 UBE2L6O14933 153 aa11.37□□□□□ -0.59
PTPMT1-201ENST00000326656 AP5S1Q9NUS5 200 aa11.37□□□□□ -0.59
PTPMT1-201ENST00000326656 LRP1Q07954 4544 aaKnown RBP11.37□□□□□ -0.59
PTPMT1-201ENST00000326656 IGLV4-60A0A075B6I1 120 aa11.36□□□□□ -0.59
PTPMT1-201ENST00000326656 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.36□□□□□ -0.59
PTPMT1-201ENST00000326656 hDV102S1A0JD36 115 aa11.36□□□□□ -0.59
PTPMT1-201ENST00000326656 AMTP48728 403 aa11.36□□□□□ -0.59
PTPMT1-201ENST00000326656 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
PTPMT1-201ENST00000326656 TWIST1Q15672 202 aa11.36□□□□□ -0.59
PTPMT1-201ENST00000326656 RPP21Q9H633 154 aaKnown RBP11.36□□□□□ -0.59
PTPMT1-201ENST00000326656 HMCN2Q8NDA2 5059 aa11.35□□□□□ -0.59
PTPMT1-201ENST00000326656 TEX261Q6UWH6 196 aa11.35□□□□□ -0.59
PTPMT1-201ENST00000326656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.35□□□□□ -0.59
PTPMT1-201ENST00000326656 IGHV3-64A0A075B6Q5 118 aa11.34□□□□□ -0.59
PTPMT1-201ENST00000326656 NCR2O95944 276 aa11.34□□□□□ -0.59
PTPMT1-201ENST00000326656 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
PTPMT1-201ENST00000326656 SMIM15Q7Z3B0 74 aa11.34□□□□□ -0.59
PTPMT1-201ENST00000326656 RNF185Q96GF1 192 aa11.34□□□□□ -0.59
PTPMT1-201ENST00000326656 H7C423 109 aa11.33□□□□□ -0.6
PTPMT1-201ENST00000326656 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
PTPMT1-201ENST00000326656 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
PTPMT1-201ENST00000326656 GFRA4Q9GZZ7 299 aa11.33□□□□□ -0.6
PTPMT1-201ENST00000326656 FAT3Q8TDW7 4589 aa11.32□□□□□ -0.6
PTPMT1-201ENST00000326656 FAM210AQ96ND0 272 aa11.32□□□□□ -0.6
PTPMT1-201ENST00000326656 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
PTPMT1-201ENST00000326656 TMEM250H0YL14 139 aa11.31□□□□□ -0.6
PTPMT1-201ENST00000326656 PANO1I0J062 215 aa11.31□□□□□ -0.6
PTPMT1-201ENST00000326656 K7EN84 100 aa11.31□□□□□ -0.6
PTPMT1-201ENST00000326656 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
PTPMT1-201ENST00000326656 A8MWL6 223 aa11.29□□□□□ -0.6
PTPMT1-201ENST00000326656 SLPIP03973 132 aa11.29□□□□□ -0.6
PTPMT1-201ENST00000326656 FOXA3P55318 350 aaPredicted RBP11.29□□□□□ -0.6
PTPMT1-201ENST00000326656 BLOC1S1P78537 153 aa11.29□□□□□ -0.6
PTPMT1-201ENST00000326656 FAM231DQ6ZW35 169 aa11.29□□□□□ -0.6
PTPMT1-201ENST00000326656 GTSF1Q8WW33 167 aa11.29□□□□□ -0.6
PTPMT1-201ENST00000326656 DPH3Q96FX2 82 aa11.29□□□□□ -0.6
PTPMT1-201ENST00000326656 AMMECR1LQ6DCA0 310 aa11.28□□□□□ -0.6
PTPMT1-201ENST00000326656 TRAV26-2A0A0B4J265 109 aa11.27□□□□□ -0.61
PTPMT1-201ENST00000326656 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
PTPMT1-201ENST00000326656 GATCO43716 136 aaKnown RBP11.27□□□□□ -0.61
PTPMT1-201ENST00000326656 CT83Q5H943 113 aa11.27□□□□□ -0.61
PTPMT1-201ENST00000326656 Q6ZRU5 148 aa11.27□□□□□ -0.61
PTPMT1-201ENST00000326656 A0A087WYN8 130 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 TRBV6-5A0A0K0K1A5 114 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 APCSP02743 223 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 RPS10P46783 165 aaKnown RBP11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 Q6ZNX1 250 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 C15orf56Q8N910 161 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
PTPMT1-201ENST00000326656 I3L3M4 83 aa11.25□□□□□ -0.61
PTPMT1-201ENST00000326656 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
PTPMT1-201ENST00000326656 FGF6P10767 208 aa11.25□□□□□ -0.61
PTPMT1-201ENST00000326656 RPL39LQ96EH5 51 aaKnown RBP11.25□□□□□ -0.61
PTPMT1-201ENST00000326656 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
PTPMT1-201ENST00000326656 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
PTPMT1-201ENST00000326656 CHCHD10Q8WYQ3 142 aaPredicted RBP11.24□□□□□ -0.61
PTPMT1-201ENST00000326656 BORCS7Q96B45 105 aa11.24□□□□□ -0.61
PTPMT1-201ENST00000326656 GVQW2A0A096LPI5 108 aaPredicted RBP11.23□□□□□ -0.61
PTPMT1-201ENST00000326656 PMCHP20382 165 aa11.23□□□□□ -0.61
PTPMT1-201ENST00000326656 OR5A1Q8NGJ0 315 aa11.23□□□□□ -0.61
PTPMT1-201ENST00000326656 BTF3L4Q96K17 158 aa11.23□□□□□ -0.61
PTPMT1-201ENST00000326656 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
PTPMT1-201ENST00000326656 KRTAP3-2Q9BYR7 98 aa11.23□□□□□ -0.61
PTPMT1-201ENST00000326656 IGKV3OR2-268A0A0C4DH90 116 aa11.22□□□□□ -0.61
PTPMT1-201ENST00000326656 FAM231BA6NCW3 169 aa11.22□□□□□ -0.61
PTPMT1-201ENST00000326656 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
PTPMT1-201ENST00000326656 TMEM101Q96IK0 257 aa11.22□□□□□ -0.61
PTPMT1-201ENST00000326656 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
PTPMT1-201ENST00000326656 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
PTPMT1-201ENST00000326656 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.21□□□□□ -0.61
PTPMT1-201ENST00000326656 IGKV2-29A2NJV5 120 aaPredicted RBP11.21□□□□□ -0.61
PTPMT1-201ENST00000326656 ESDP10768 282 aa11.21□□□□□ -0.61
PTPMT1-201ENST00000326656 COX6A2Q02221 97 aa11.21□□□□□ -0.61
PTPMT1-201ENST00000326656 AKAP14Q86UN6 197 aa11.21□□□□□ -0.61
PTPMT1-201ENST00000326656 C7orf33Q8WU49 177 aa11.21□□□□□ -0.61
PTPMT1-201ENST00000326656 A0A1B0GUT8 65 aa11.2□□□□□ -0.62
PTPMT1-201ENST00000326656 ALKAL2Q6UX46 152 aa11.2□□□□□ -0.62
PTPMT1-201ENST00000326656 TSKUQ8WUA8 353 aa11.2□□□□□ -0.62
PTPMT1-201ENST00000326656 TMEM191AQ9H0A3 160 aa11.2□□□□□ -0.62
PTPMT1-201ENST00000326656 ST20Q9HBF5 79 aa11.2□□□□□ -0.62
PTPMT1-201ENST00000326656 FOXI1Q12951 378 aa11.19□□□□□ -0.62
PTPMT1-201ENST00000326656 LINC00474Q9P2X8 69 aa11.19□□□□□ -0.62
PTPMT1-201ENST00000326656 TRBV27A0A0K0K1C4 114 aa11.18□□□□□ -0.62
PTPMT1-201ENST00000326656 POLR2KP53803 58 aaKnown RBP11.18□□□□□ -0.62
PTPMT1-201ENST00000326656 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
PTPMT1-201ENST00000326656 MRPL52Q86TS9 123 aaKnown RBP11.18□□□□□ -0.62
PTPMT1-201ENST00000326656 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
PTPMT1-201ENST00000326656 SMIM7Q9BQ49 75 aa11.18□□□□□ -0.62
PTPMT1-201ENST00000326656 OSTCQ9NRP0 149 aa11.18□□□□□ -0.62
PTPMT1-201ENST00000326656 IGHV1-58A0A0C4DH39 117 aa11.17□□□□□ -0.62
PTPMT1-201ENST00000326656 LINC00959A0A1B0GUT2 108 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms