RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 KIAA1549LQ6ZVL6 1849 aa10.68□□□□□ -0.7
PCM1-201ENST00000325083 XAGE1AQ9HD64 81 aa10.68□□□□□ -0.7
PCM1-201ENST00000325083 WFDC13Q8IUB5 93 aa10.67□□□□□ -0.7
PCM1-201ENST00000325083 PLA2G2EQ9NZK7 142 aa10.67□□□□□ -0.7
PCM1-201ENST00000325083 USF3Q68DE3 2245 aa10.67□□□□□ -0.7
PCM1-201ENST00000325083 ABCA4P78363 2273 aa10.66□□□□□ -0.7
PCM1-201ENST00000325083 ODF3L1Q8IXM7 274 aa10.66□□□□□ -0.7
PCM1-201ENST00000325083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.66□□□□□ -0.7
PCM1-201ENST00000325083 ZFAND3Q9H8U3 227 aa10.66□□□□□ -0.7
PCM1-201ENST00000325083 SPATA12Q7Z6I5 190 aa10.66□□□□□ -0.7
PCM1-201ENST00000325083 RPL37AP8A6NKH3 93 aa10.65□□□□□ -0.7
PCM1-201ENST00000325083 LINC00482Q8N8I6 264 aa10.65□□□□□ -0.7
PCM1-201ENST00000325083 INSL3P51460 131 aa10.64□□□□□ -0.71
PCM1-201ENST00000325083 ZNF80P51504 273 aaPredicted RBP10.64□□□□□ -0.71
PCM1-201ENST00000325083 V9GYY9 64 aa10.64□□□□□ -0.71
PCM1-201ENST00000325083 NCOA6Q14686 2063 aaPredicted RBP10.64□□□□□ -0.71
PCM1-201ENST00000325083 A6NDX4 124 aa10.64□□□□□ -0.71
PCM1-201ENST00000325083 C20orf173Q96LM9 149 aa10.64□□□□□ -0.71
PCM1-201ENST00000325083 CCKP06307 115 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 CEP290O15078 2479 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 UQCRQO14949 82 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 PLA2G5P39877 138 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 PROK1P58294 105 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 KRTAP27-1Q3LI81 207 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 NEXN-AS1Q8NBZ9 246 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 LINC00526Q96FQ7 95 aa10.63□□□□□ -0.71
PCM1-201ENST00000325083 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
PCM1-201ENST00000325083 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
PCM1-201ENST00000325083 LINC01548A6NM66 108 aa10.62□□□□□ -0.71
PCM1-201ENST00000325083 IGLV2-14P01704 120 aa10.62□□□□□ -0.71
PCM1-201ENST00000325083 C2orf16Q68DN1 1984 aa10.62□□□□□ -0.71
PCM1-201ENST00000325083 INAFM1C9JVW0 142 aa10.61□□□□□ -0.71
PCM1-201ENST00000325083 PCNX2A6NKB5 2137 aa10.61□□□□□ -0.71
PCM1-201ENST00000325083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.61□□□□□ -0.719e-7■■■■■ 36.1
PCM1-201ENST00000325083 LY6G6CO95867 125 aa10.61□□□□□ -0.71
PCM1-201ENST00000325083 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
PCM1-201ENST00000325083 CDKN2A-AS1Q9UH64 79 aa10.6□□□□□ -0.71
PCM1-201ENST00000325083 LYRM9A8MSI8 78 aa10.6□□□□□ -0.71
PCM1-201ENST00000325083 UBE2D2P62837 147 aa10.6□□□□□ -0.71
PCM1-201ENST00000325083 TMEM89A2RUT3 159 aa10.6□□□□□ -0.71
PCM1-201ENST00000325083 NUP210LQ5VU65 1888 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 LY6LH3BQJ8 138 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 TRIAP1O43715 76 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 C22orf34Q6ZV56 151 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 Q6ZVQ6 151 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
PCM1-201ENST00000325083 ABCA1O95477 2261 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 CACNA1EQ15878 2313 aa10.59□□□□□ -0.71
PCM1-201ENST00000325083 IGF1P05019 195 aa10.58□□□□□ -0.71
PCM1-201ENST00000325083 X6R8D5 127 aa10.58□□□□□ -0.72
PCM1-201ENST00000325083 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
PCM1-201ENST00000325083 C6orf99Q4VX62 202 aa10.58□□□□□ -0.72
PCM1-201ENST00000325083 LINC00322Q6ZN03 302 aaPredicted RBP10.58□□□□□ -0.72
PCM1-201ENST00000325083 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
PCM1-201ENST00000325083 NCOR1O75376 2440 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 POM121L12Q8N7R1 296 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 LINC00308Q8TCZ7 52 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 H7C423 109 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 A8MZ25 164 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 CFAP126Q5VTH2 177 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 IGLV4-3A0A075B6K6 122 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 IGFL2Q6UWQ7 119 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 MED13Q9UHV7 2174 aa10.57□□□□□ -0.72
PCM1-201ENST00000325083 TRIOBPQ9H2D6 2365 aa10.56□□□□□ -0.72
PCM1-201ENST00000325083 PLAC8L1A1L4L8 177 aa10.56□□□□□ -0.72
PCM1-201ENST00000325083 GDF5OSQ5U4N7 250 aa10.56□□□□□ -0.72
PCM1-201ENST00000325083 Q8N9L7 120 aa10.56□□□□□ -0.72
PCM1-201ENST00000325083 TRBV6-8A0A0A6YYG3 113 aa10.56□□□□□ -0.72
PCM1-201ENST00000325083 SPTA1P02549 2419 aa10.56□□□□□ -0.72
PCM1-201ENST00000325083 DAZAP2Q15038 168 aaPredicted RBP10.56□□□□□ -0.72
PCM1-201ENST00000325083 ZNF706Q9Y5V0 76 aaPredicted RBP10.56□□□□□ -0.72
PCM1-201ENST00000325083 TRBV6-5A0A0K0K1A5 114 aa10.55□□□□□ -0.72
PCM1-201ENST00000325083 BBC3Q96PG8 261 aaPredicted RBP10.55□□□□□ -0.72
PCM1-201ENST00000325083 CACNA1BQ00975 2339 aa10.55□□□□□ -0.72
PCM1-201ENST00000325083 SYCNQ0VAF6 134 aa10.55□□□□□ -0.72
PCM1-201ENST00000325083 TIMM17BO60830 172 aa10.55□□□□□ -0.72
PCM1-201ENST00000325083 DEFB114Q30KQ6 69 aa10.55□□□□□ -0.72
PCM1-201ENST00000325083 MAPKAPK5-AS1Q8N8E1 139 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 LOC100131303A0A0U1RQF7 123 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 IGLV1-47P01700 117 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 Q6YL49 198 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 Q8N976 141 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 NOTCH4Q99466 2003 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 SMIM9A6NGZ8 99 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 IBA57-AS1B1ANH7 110 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 MRPS12O15235 138 aaKnown RBP10.54□□□□□ -0.72
PCM1-201ENST00000325083 ATP5EP2Q5VTU8 51 aa10.54□□□□□ -0.72
PCM1-201ENST00000325083 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
PCM1-201ENST00000325083 SERP2Q8N6R1 65 aa10.53□□□□□ -0.72
PCM1-201ENST00000325083 CLUHP3Q96NS8 147 aa10.53□□□□□ -0.72
PCM1-201ENST00000325083 CIRBP-AS1Q8TBR5 109 aa10.52□□□□□ -0.73
PCM1-201ENST00000325083 PKDREJQ9NTG1 2253 aa10.52□□□□□ -0.73
PCM1-201ENST00000325083 SPRY4Q9C004 299 aa10.52□□□□□ -0.73
PCM1-201ENST00000325083 ATP5EP56381 51 aaPredicted RBP10.51□□□□□ -0.73
PCM1-201ENST00000325083 FAM19A3Q7Z5A8 133 aa10.51□□□□□ -0.73
PCM1-201ENST00000325083 NANOS2P60321 138 aaKnown RBP10.51□□□□□ -0.73
PCM1-201ENST00000325083 MED12LQ86YW9 2145 aa10.51□□□□□ -0.73
PCM1-201ENST00000325083 C19orf84I3L1E1 186 aa10.5□□□□□ -0.73
PCM1-201ENST00000325083 SPTBN2O15020 2390 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms