RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 Q9UFV3 132 aa5.43□□□□□ -1.54
SMC1A-201ENST00000322213 LOC107984640A0A0U1RRK4 108 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 DNAH14Q0VDD8 3507 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 VPS13AQ96RL7 3174 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 LYNX1G3V0Z9 82 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 BUB3O43684 328 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 LYNX1P0DP58 116 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 LOXP28300 417 aaPredicted RBP5.42□□□□□ -1.54
SMC1A-201ENST00000322213 HIST2H2BCQ6DN03 193 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 HIST2H2BDQ6DRA6 164 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 CNFNQ9BYD5 112 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 H7C423 109 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 IGLV2-11P01706 119 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 H3BUA1 57 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 MRPS12O15235 138 aaKnown RBP5.42□□□□□ -1.54
SMC1A-201ENST00000322213 Q6ZQT7 251 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 MAPKAPK5-AS1Q8N8E1 139 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 TRBV7-3A0A075B6L6 115 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 F8WDY8 70 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 OVOL3O00110 214 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 MP68P56378 58 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 BLCAPP62952 87 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 NKAPP1Q8N9T2 125 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 WFDC9Q8NEX5 89 aa5.42□□□□□ -1.54
SMC1A-201ENST00000322213 LST1O00453 97 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 IGHV3-16A0A0C4DH30 117 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 TIMM17BO60830 172 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 PIK3CD-AS1Q5SR53 167 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 RITA1Q96K30 269 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 HOXB4P17483 251 aaPredicted RBP5.41□□□□□ -1.54
SMC1A-201ENST00000322213 NRACQ8N912 160 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 LINC00574Q9H8X3 128 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 PRORYQ9H606 182 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 MYCNOSP40205 109 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 ZNRF2Q8NHG8 242 aa5.41□□□□□ -1.54
SMC1A-201ENST00000322213 PIP4P2Q8N4L2 257 aa5.4□□□□□ -1.54
SMC1A-201ENST00000322213 IGHV3-38A0A0C4DH36 116 aa5.4□□□□□ -1.54
SMC1A-201ENST00000322213 LECT2O14960 151 aa5.4□□□□□ -1.54
SMC1A-201ENST00000322213 NDUFA1O15239 70 aa5.4□□□□□ -1.54
SMC1A-201ENST00000322213 IGHV3-53P01767 116 aa5.4□□□□□ -1.54
SMC1A-201ENST00000322213 SP5Q6BEB4 398 aaPredicted RBP5.4□□□□□ -1.54
SMC1A-201ENST00000322213 TMEM263Q8WUH6 116 aaKnown RBP5.4□□□□□ -1.54
SMC1A-201ENST00000322213 TRIOO75962 3097 aa5.4□□□□□ -1.54
SMC1A-201ENST00000322213 RNF185Q96GF1 192 aa5.4□□□□□ -1.54
SMC1A-201ENST00000322213 A0A0J9YXV3 536 aa5.4□□□□□ -1.55
SMC1A-201ENST00000322213 E7EUB6 86 aa5.4□□□□□ -1.55
SMC1A-201ENST00000322213 HHLA3Q9XRX5 114 aa5.4□□□□□ -1.55
SMC1A-201ENST00000322213 CTSGP08311 255 aa5.4□□□□□ -1.55
SMC1A-201ENST00000322213 C20orf197Q8N268 126 aa5.4□□□□□ -1.55
SMC1A-201ENST00000322213 WFDC11Q8NEX6 87 aa5.4□□□□□ -1.55
SMC1A-201ENST00000322213 ZMAT4Q9H898 229 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 SMIM26A0A096LP01 95 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 A0A0J9YX75 114 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 TRBV7-7A0A0K0K1E9 115 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 H3BUX3 64 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 K7EQD1 137 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 J3QLI3 93 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 WIPF1O43516 503 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 RPL35AP18077 110 aaKnown RBP5.39□□□□□ -1.55
SMC1A-201ENST00000322213 C11orf44Q8N8P7 122 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 G3V318 75 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 HIGD2BQ4VC39 106 aa5.39□□□□□ -1.55
SMC1A-201ENST00000322213 XIRP2A4UGR9 3374 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 IGF2-ASQ6U949 168 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 ENHOQ6UWT2 76 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 E7EQL1 145 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 BRWD1-AS2P59051 145 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 KALRNO60229 2985 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 SETXQ7Z333 2677 aaKnown RBP5.38□□□□□ -1.55
SMC1A-201ENST00000322213 XCL1P47992 114 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 NREPQ16612 68 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 COL8A2P25067 703 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 Q9HAA7 133 aa5.38□□□□□ -1.55
SMC1A-201ENST00000322213 PRSS33Q8NF86 280 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 AJUBAQ96IF1 538 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 TRBV12-3P01733 135 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 LYRM9A8MSI8 78 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 CRIP1P50238 77 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 A0A1W2PRX2 142 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 WT1P19544 449 aaPredicted RBP5.37□□□□□ -1.55
SMC1A-201ENST00000322213 FRYQ5TBA9 3013 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 USP17L23D6RBM5 183 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 NDUFB1O75438 58 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 NXPH4O95158 308 aa5.37□□□□□ -1.55
SMC1A-201ENST00000322213 PRB1P04280 392 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 UBE2D1P51668 147 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 DAD1P61803 113 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 LY6G6EA0A0G2JKS1 128 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 U3KQA8 63 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 TMEM105Q8N8V8 129 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 C20orf203Q8NBC4 194 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 CRYGAP11844 174 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 DSCR9P59020 149 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 DEFB131AP59861 70 aa5.36□□□□□ -1.55
SMC1A-201ENST00000322213 KIR2DL5BQ8NHK3 375 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms