RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 MEF2BQ02080 365 aaPredicted RBP12.86□□□□□ -0.35
SERF1A-201ENST00000317633 WDR73Q6P4I2 378 aa12.86□□□□□ -0.35
SERF1A-201ENST00000317633 LYZL1Q6UWQ5 148 aa12.86□□□□□ -0.35
SERF1A-201ENST00000317633 DPH3Q96FX2 82 aa12.86□□□□□ -0.35
SERF1A-201ENST00000317633 PANO1I0J062 215 aa12.85□□□□□ -0.35
SERF1A-201ENST00000317633 NTF3P20783 257 aa12.85□□□□□ -0.35
SERF1A-201ENST00000317633 HNRNPA3P51991 378 aaKnown RBP12.85□□□□□ -0.35
SERF1A-201ENST00000317633 CIRBPQ14011 172 aaKnown RBP12.85□□□□□ -0.35
SERF1A-201ENST00000317633 COTL1Q14019 142 aa12.85□□□□□ -0.35
SERF1A-201ENST00000317633 MED9Q9NWA0 146 aa12.85□□□□□ -0.35
SERF1A-201ENST00000317633 AMTP48728 403 aa12.84□□□□□ -0.35
SERF1A-201ENST00000317633 C9orf62Q8N4C0 152 aa12.84□□□□□ -0.35
SERF1A-201ENST00000317633 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
SERF1A-201ENST00000317633 SULT1A2P50226 295 aa12.83□□□□□ -0.36
SERF1A-201ENST00000317633 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
SERF1A-201ENST00000317633 CTRLP40313 264 aa12.81□□□□□ -0.36
SERF1A-201ENST00000317633 TWIST1Q15672 202 aa12.81□□□□□ -0.36
SERF1A-201ENST00000317633 CFAP161Q6P656 301 aa12.81□□□□□ -0.36
SERF1A-201ENST00000317633 Q6ZRU5 148 aa12.81□□□□□ -0.36
SERF1A-201ENST00000317633 HMCN2Q8NDA2 5059 aa12.81□□□□□ -0.36
SERF1A-201ENST00000317633 TRBV20OR9-2A0A075B6H5 130 aa12.8□□□□□ -0.36
SERF1A-201ENST00000317633 NUDT10Q8NFP7 164 aa12.8□□□□□ -0.36
SERF1A-201ENST00000317633 NUDT11Q96G61 164 aa12.8□□□□□ -0.36
SERF1A-201ENST00000317633 A0A087WYN8 130 aa12.79□□□□□ -0.36
SERF1A-201ENST00000317633 SLPIP03973 132 aa12.79□□□□□ -0.36
SERF1A-201ENST00000317633 BCL2P10415 239 aa12.79□□□□□ -0.36
SERF1A-201ENST00000317633 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
SERF1A-201ENST00000317633 TAGLN2P37802 199 aaKnown RBP12.78□□□□□ -0.36
SERF1A-201ENST00000317633 SMIM15Q7Z3B0 74 aa12.78□□□□□ -0.36
SERF1A-201ENST00000317633 GAGE12HA6NDE8 117 aa12.77□□□□□ -0.37
SERF1A-201ENST00000317633 AMMECR1LQ6DCA0 310 aa12.77□□□□□ -0.37
SERF1A-201ENST00000317633 SPACA4Q8TDM5 124 aa12.77□□□□□ -0.37
SERF1A-201ENST00000317633 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
SERF1A-201ENST00000317633 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
SERF1A-201ENST00000317633 NCR2O95944 276 aa12.76□□□□□ -0.37
SERF1A-201ENST00000317633 CHTF8P0CG12 524 aa12.76□□□□□ -0.37
SERF1A-201ENST00000317633 GATD1Q8NB37 220 aa12.76□□□□□ -0.37
SERF1A-201ENST00000317633 H7C423 109 aa12.75□□□□□ -0.37
SERF1A-201ENST00000317633 RPS10P46783 165 aaKnown RBP12.75□□□□□ -0.37
SERF1A-201ENST00000317633 TEX261Q6UWH6 196 aa12.75□□□□□ -0.37
SERF1A-201ENST00000317633 C15orf56Q8N910 161 aa12.75□□□□□ -0.37
SERF1A-201ENST00000317633 TRAV26-2A0A0B4J265 109 aa12.74□□□□□ -0.37
SERF1A-201ENST00000317633 C7orf33Q8WU49 177 aa12.74□□□□□ -0.37
SERF1A-201ENST00000317633 RNASE7Q9H1E1 156 aaKnown RBP12.74□□□□□ -0.37
SERF1A-201ENST00000317633 PLAC8Q9NZF1 115 aa12.74□□□□□ -0.37
SERF1A-201ENST00000317633 APCSP02743 223 aa12.73□□□□□ -0.37
SERF1A-201ENST00000317633 COX6A2Q02221 97 aa12.73□□□□□ -0.37
SERF1A-201ENST00000317633 RNASEKQ6P5S7 137 aaKnown RBP12.73□□□□□ -0.37
SERF1A-201ENST00000317633 SLC51BQ86UW2 128 aa12.73□□□□□ -0.37
SERF1A-201ENST00000317633 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
SERF1A-201ENST00000317633 MT1HL1P0DM35 61 aa12.72□□□□□ -0.37
SERF1A-201ENST00000317633 Q6ZNX1 250 aa12.72□□□□□ -0.37
SERF1A-201ENST00000317633 OCC1Q8TAD7 63 aa12.72□□□□□ -0.37
SERF1A-201ENST00000317633 CHCHD10Q8WYQ3 142 aaPredicted RBP12.72□□□□□ -0.37
SERF1A-201ENST00000317633 HIGD2BQ4VC39 106 aa12.71□□□□□ -0.37
SERF1A-201ENST00000317633 RPL39LQ96EH5 51 aaKnown RBP12.71□□□□□ -0.37
SERF1A-201ENST00000317633 SDHAF1A6NFY7 115 aa12.7□□□□□ -0.38
SERF1A-201ENST00000317633 K7EN84 100 aa12.7□□□□□ -0.38
SERF1A-201ENST00000317633 FGF6P10767 208 aa12.7□□□□□ -0.38
SERF1A-201ENST00000317633 ZNF25P17030 456 aaPredicted RBP12.7□□□□□ -0.38
SERF1A-201ENST00000317633 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.69□□□□□ -0.38
SERF1A-201ENST00000317633 GVQW2A0A096LPI5 108 aaPredicted RBP12.69□□□□□ -0.38
SERF1A-201ENST00000317633 IGKV2-29A2NJV5 120 aaPredicted RBP12.69□□□□□ -0.38
SERF1A-201ENST00000317633 PHOX2AO14813 284 aa12.69□□□□□ -0.38
SERF1A-201ENST00000317633 MAJINQ3KP22 176 aa12.69□□□□□ -0.38
SERF1A-201ENST00000317633 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
SERF1A-201ENST00000317633 BTF3L4Q96K17 158 aa12.69□□□□□ -0.38
SERF1A-201ENST00000317633 PKIGQ9Y2B9 76 aa12.69□□□□□ -0.38
SERF1A-201ENST00000317633 UBR4Q5T4S7 5183 aa12.68□□□□□ -0.38
SERF1A-201ENST00000317633 I3L3M4 83 aa12.68□□□□□ -0.38
SERF1A-201ENST00000317633 GATCO43716 136 aaKnown RBP12.68□□□□□ -0.38
SERF1A-201ENST00000317633 TCTE3Q8IZS6 198 aa12.68□□□□□ -0.38
SERF1A-201ENST00000317633 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
SERF1A-201ENST00000317633 TMEM101Q96IK0 257 aa12.68□□□□□ -0.38
SERF1A-201ENST00000317633 IGKV2-24A0A0C4DH68 120 aa12.67□□□□□ -0.38
SERF1A-201ENST00000317633 A8MWL6 223 aa12.67□□□□□ -0.38
SERF1A-201ENST00000317633 PMCHP20382 165 aa12.67□□□□□ -0.38
SERF1A-201ENST00000317633 OR5A1Q8NGJ0 315 aa12.67□□□□□ -0.38
SERF1A-201ENST00000317633 TMEM250H0YL14 139 aa12.66□□□□□ -0.38
SERF1A-201ENST00000317633 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
SERF1A-201ENST00000317633 FAM231DQ6ZW35 169 aa12.66□□□□□ -0.38
SERF1A-201ENST00000317633 STPG4Q8N801 248 aa12.66□□□□□ -0.38
SERF1A-201ENST00000317633 BORCS7Q96B45 105 aa12.66□□□□□ -0.38
SERF1A-201ENST00000317633 FAM210AQ96ND0 272 aa12.66□□□□□ -0.38
SERF1A-201ENST00000317633 TRBV6-5A0A0K0K1A5 114 aa12.65□□□□□ -0.38
SERF1A-201ENST00000317633 FOXI1Q12951 378 aa12.65□□□□□ -0.38
SERF1A-201ENST00000317633 LINC00474Q9P2X8 69 aa12.65□□□□□ -0.38
SERF1A-201ENST00000317633 XCL1P47992 114 aa12.63□□□□□ -0.39
SERF1A-201ENST00000317633 CT83Q5H943 113 aa12.63□□□□□ -0.39
SERF1A-201ENST00000317633 ST20Q9HBF5 79 aa12.63□□□□□ -0.39
SERF1A-201ENST00000317633 IGHV1-58A0A0C4DH39 117 aa12.62□□□□□ -0.39
SERF1A-201ENST00000317633 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
SERF1A-201ENST00000317633 BLOC1S1P78537 153 aa12.62□□□□□ -0.39
SERF1A-201ENST00000317633 MRAP2Q96G30 205 aa12.62□□□□□ -0.39
SERF1A-201ENST00000317633 A0A096LNI7 61 aa12.61□□□□□ -0.39
SERF1A-201ENST00000317633 LINC00959A0A1B0GUT2 108 aa12.61□□□□□ -0.39
SERF1A-201ENST00000317633 CCL25O15444 150 aa12.61□□□□□ -0.39
SERF1A-201ENST00000317633 ESDP10768 282 aa12.61□□□□□ -0.39
SERF1A-201ENST00000317633 PRR3P79522 188 aaKnown RBP12.61□□□□□ -0.39
SERF1A-201ENST00000317633 SS18Q15532 418 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms