RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 H7C423 109 aa12.04□□□□□ -0.48
CACFD1-202ENST00000316948 I3L3M4 83 aa12.04□□□□□ -0.48
CACFD1-202ENST00000316948 CD28P10747 220 aa12.04□□□□□ -0.48
CACFD1-202ENST00000316948 ID1P41134 155 aa12.04□□□□□ -0.48
CACFD1-202ENST00000316948 C9orf85Q96MD7 179 aa12.04□□□□□ -0.48
CACFD1-202ENST00000316948 DUX3Q96PT4 197 aa12.04□□□□□ -0.48
CACFD1-202ENST00000316948 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
CACFD1-202ENST00000316948 ACACBO00763 2458 aa12.03□□□□□ -0.48
CACFD1-202ENST00000316948 LITAFQ99732 161 aa12.03□□□□□ -0.48
CACFD1-202ENST00000316948 IGHG2P01859 326 aa12.03□□□□□ -0.48
CACFD1-202ENST00000316948 USMG5Q96IX5 58 aa12.03□□□□□ -0.48
CACFD1-202ENST00000316948 HTN1P15515 57 aa12.02□□□□□ -0.48
CACFD1-202ENST00000316948 SPINK13Q1W4C9 94 aa12.02□□□□□ -0.48
CACFD1-202ENST00000316948 A0A0J9YX75 114 aa12.02□□□□□ -0.49
CACFD1-202ENST00000316948 DCANP1Q8TF63 244 aa12.02□□□□□ -0.49
CACFD1-202ENST00000316948 NDUFA12Q9UI09 145 aa12.02□□□□□ -0.49
CACFD1-202ENST00000316948 FAM208BQ5VWN6 2430 aa12.02□□□□□ -0.49
CACFD1-202ENST00000316948 COX6CP09669 75 aa12.01□□□□□ -0.49
CACFD1-202ENST00000316948 SMIM20Q8N5G0 67 aa12.01□□□□□ -0.49
CACFD1-202ENST00000316948 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
CACFD1-202ENST00000316948 TMEM95Q3KNT9 176 aa12.01□□□□□ -0.49
CACFD1-202ENST00000316948 Q6Q795 121 aa12□□□□□ -0.49
CACFD1-202ENST00000316948 DAND5Q8N907 189 aa12□□□□□ -0.49
CACFD1-202ENST00000316948 PROK1P58294 105 aa12□□□□□ -0.49
CACFD1-202ENST00000316948 IGHV1OR15-1A0A075B7D0 117 aa11.99□□□□□ -0.49
CACFD1-202ENST00000316948 A6NDX4 124 aa11.99□□□□□ -0.49
CACFD1-202ENST00000316948 C3orf56Q8N813 242 aa11.98□□□□□ -0.49
CACFD1-202ENST00000316948 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
CACFD1-202ENST00000316948 LRRK2Q5S007 2527 aa11.98□□□□□ -0.49
CACFD1-202ENST00000316948 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
CACFD1-202ENST00000316948 H3BUA1 57 aa11.97□□□□□ -0.49
CACFD1-202ENST00000316948 FAM104AQ969W3 186 aa11.97□□□□□ -0.49
CACFD1-202ENST00000316948 CHCHD5Q9BSY4 110 aa11.97□□□□□ -0.49
CACFD1-202ENST00000316948 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
CACFD1-202ENST00000316948 PIMREGQ9BSJ6 248 aa11.97□□□□□ -0.49
CACFD1-202ENST00000316948 ABCA12Q86UK0 2595 aa11.97□□□□□ -0.49
CACFD1-202ENST00000316948 IGLV1-40P01703 118 aa11.96□□□□□ -0.49
CACFD1-202ENST00000316948 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.49
CACFD1-202ENST00000316948 MIAQ16674 131 aa11.96□□□□□ -0.49
CACFD1-202ENST00000316948 KNCNA6PVL3 124 aa11.96□□□□□ -0.49
CACFD1-202ENST00000316948 H3BT86 120 aa11.96□□□□□ -0.49
CACFD1-202ENST00000316948 GNLYP22749 145 aa11.96□□□□□ -0.49
CACFD1-202ENST00000316948 HERV-K104P63124 156 aa11.96□□□□□ -0.49
CACFD1-202ENST00000316948 Q9UF83 564 aa11.96□□□□□ -0.49
CACFD1-202ENST00000316948 TLN2Q9Y4G6 2542 aa11.96□□□□□ -0.5
CACFD1-202ENST00000316948 C10orf99Q6UWK7 81 aa11.96□□□□□ -0.5
CACFD1-202ENST00000316948 LINC01600Q96MT4 127 aa11.96□□□□□ -0.5
CACFD1-202ENST00000316948 SPANXDQ9BXN6 97 aa11.95□□□□□ -0.5
CACFD1-202ENST00000316948 SPANXCQ9NY87 97 aa11.95□□□□□ -0.5
CACFD1-202ENST00000316948 TRGV11A0A075B6L2 103 aa11.95□□□□□ -0.5
CACFD1-202ENST00000316948 VSIG2Q96IQ7 327 aa11.95□□□□□ -0.5
CACFD1-202ENST00000316948 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
CACFD1-202ENST00000316948 LST1O00453 97 aa11.94□□□□□ -0.5
CACFD1-202ENST00000316948 BRI3O95415 125 aa11.94□□□□□ -0.5
CACFD1-202ENST00000316948 PRM2P04554 102 aa11.94□□□□□ -0.5
CACFD1-202ENST00000316948 SNRPD3P62318 126 aaKnown RBP11.94□□□□□ -0.5
CACFD1-202ENST00000316948 TMEM61Q8N0U2 210 aa11.94□□□□□ -0.5
CACFD1-202ENST00000316948 FBN2P35556 2912 aa11.93□□□□□ -0.5
CACFD1-202ENST00000316948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.93□□□□□ -0.5
CACFD1-202ENST00000316948 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
CACFD1-202ENST00000316948 IGKV2-29A2NJV5 120 aaPredicted RBP11.93□□□□□ -0.5
CACFD1-202ENST00000316948 AVPP01185 164 aa11.93□□□□□ -0.5
CACFD1-202ENST00000316948 C10orf105Q8TEF2 133 aa11.93□□□□□ -0.5
CACFD1-202ENST00000316948 TNFRSF18Q9Y5U5 241 aa11.93□□□□□ -0.5
CACFD1-202ENST00000316948 SHISA2Q6UWI4 295 aa11.93□□□□□ -0.5
CACFD1-202ENST00000316948 DUX5Q96PT3 197 aa11.92□□□□□ -0.5
CACFD1-202ENST00000316948 CCL19Q99731 98 aa11.92□□□□□ -0.5
CACFD1-202ENST00000316948 PYGO1Q9Y3Y4 419 aa11.92□□□□□ -0.5
CACFD1-202ENST00000316948 CFHR3Q02985 330 aa11.92□□□□□ -0.5
CACFD1-202ENST00000316948 K7EMT4 169 aa11.91□□□□□ -0.5
CACFD1-202ENST00000316948 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
CACFD1-202ENST00000316948 ATP5J2P56134 94 aa11.91□□□□□ -0.5
CACFD1-202ENST00000316948 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.5
CACFD1-202ENST00000316948 PTPN13Q12923 2485 aa11.9□□□□□ -0.5
CACFD1-202ENST00000316948 MSMBP08118 114 aa11.9□□□□□ -0.51
CACFD1-202ENST00000316948 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.51
CACFD1-202ENST00000316948 DOPEY1Q5JWR5 2465 aa11.89□□□□□ -0.51
CACFD1-202ENST00000316948 MYO9AB2RTY4 2548 aa11.89□□□□□ -0.51
CACFD1-202ENST00000316948 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
CACFD1-202ENST00000316948 FAM110AQ9BQ89 295 aa11.89□□□□□ -0.51
CACFD1-202ENST00000316948 SETD2Q9BYW2 2564 aaPredicted RBP11.89□□□□□ -0.51
CACFD1-202ENST00000316948 RBMY1A1P0DJD3 496 aaKnown RBP11.89□□□□□ -0.51
CACFD1-202ENST00000316948 RBMY1CP0DJD4 496 aa11.89□□□□□ -0.51
CACFD1-202ENST00000316948 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
CACFD1-202ENST00000316948 MRPL23Q16540 153 aaKnown RBP11.89□□□□□ -0.51
CACFD1-202ENST00000316948 Q6ZSN1 163 aa11.89□□□□□ -0.51
CACFD1-202ENST00000316948 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
CACFD1-202ENST00000316948 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
CACFD1-202ENST00000316948 K7EQG2 157 aa11.88□□□□□ -0.51
CACFD1-202ENST00000316948 PSMB8P28062 276 aa11.88□□□□□ -0.51
CACFD1-202ENST00000316948 ANKRD17O75179 2603 aaKnown RBP11.88□□□□□ -0.51
CACFD1-202ENST00000316948 EPG5Q9HCE0 2579 aa11.88□□□□□ -0.51
CACFD1-202ENST00000316948 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
CACFD1-202ENST00000316948 IGHV4-59P01825 116 aa11.87□□□□□ -0.51
CACFD1-202ENST00000316948 SYNJ2BPP57105 145 aa11.87□□□□□ -0.51
CACFD1-202ENST00000316948 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
CACFD1-202ENST00000316948 LINC00467Q9BRT7 94 aa11.87□□□□□ -0.51
CACFD1-202ENST00000316948 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
CACFD1-202ENST00000316948 FAM236AA0A1B0GUQ0 79 aa11.87□□□□□ -0.51
CACFD1-202ENST00000316948 FAM236BA0A1B0GV22 79 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms