RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
VRK3-201ENST00000316763 OCIAD2Q56VL3 154 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
VRK3-201ENST00000316763 A8MWV9 139 aa10.34□□□□□ -0.75
VRK3-201ENST00000316763 K7ERJ3 54 aa10.34□□□□□ -0.75
VRK3-201ENST00000316763 RBX1P62877 108 aa10.34□□□□□ -0.75
VRK3-201ENST00000316763 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
VRK3-201ENST00000316763 SPAG8Q99932 426 aaPredicted RBP10.34□□□□□ -0.75
VRK3-201ENST00000316763 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
VRK3-201ENST00000316763 LINC00482Q8N8I6 264 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 C20orf203Q8NBC4 194 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 PTH2Q96A98 100 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 TMEM238LA0A1B0GVL6 79 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 RBMY1BA6NDE4 496 aaKnown RBP10.33□□□□□ -0.76
VRK3-201ENST00000316763 RBMY1EA6NEQ0 496 aaKnown RBP10.33□□□□□ -0.76
VRK3-201ENST00000316763 A6NJY4 79 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 K7ERU9 68 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 RBMY1DP0C7P1 496 aaKnown RBP10.33□□□□□ -0.76
VRK3-201ENST00000316763 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 LINC00467Q9BRT7 94 aa10.33□□□□□ -0.76
VRK3-201ENST00000316763 IGLL5B9A064 214 aa10.32□□□□□ -0.76
VRK3-201ENST00000316763 PF4P02776 101 aa10.32□□□□□ -0.76
VRK3-201ENST00000316763 EMP1P54849 157 aa10.32□□□□□ -0.76
VRK3-201ENST00000316763 SAP30O75446 220 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 INSP01308 110 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 P0DMU3 169 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.76
VRK3-201ENST00000316763 NFE4Q86UQ8 179 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 LINC01587Q99440 93 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 SPXQ9BT56 116 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 A0A1B0GWB2 263 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 RNF151Q2KHN1 245 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 ZNF479Q96JC4 524 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 CLUHP3Q96NS8 147 aa10.31□□□□□ -0.76
VRK3-201ENST00000316763 VWFP04275 2813 aa10.3□□□□□ -0.76
VRK3-201ENST00000316763 SPATA3Q8NHX4 192 aa10.3□□□□□ -0.76
VRK3-201ENST00000316763 VCX2Q9H322 139 aa10.3□□□□□ -0.76
VRK3-201ENST00000316763 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
VRK3-201ENST00000316763 RHODO00212 210 aa10.29□□□□□ -0.76
VRK3-201ENST00000316763 ZNRF2Q8NHG8 242 aa10.29□□□□□ -0.76
VRK3-201ENST00000316763 PYGO1Q9Y3Y4 419 aa10.29□□□□□ -0.76
VRK3-201ENST00000316763 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
VRK3-201ENST00000316763 RRN3P1Q2M238 152 aa10.28□□□□□ -0.76
VRK3-201ENST00000316763 PLEKHB2Q96CS7 222 aa10.28□□□□□ -0.76
VRK3-201ENST00000316763 TRRAPQ9Y4A5 3859 aa10.28□□□□□ -0.76
VRK3-201ENST00000316763 IGLV4-3A0A075B6K6 122 aa10.27□□□□□ -0.76
VRK3-201ENST00000316763 J3QQQ9 107 aa10.27□□□□□ -0.76
VRK3-201ENST00000316763 CRYBA4P53673 196 aa10.27□□□□□ -0.76
VRK3-201ENST00000316763 OPRPNQ99935 248 aaPredicted RBP10.27□□□□□ -0.76
VRK3-201ENST00000316763 LEPROTO15243 131 aa10.27□□□□□ -0.77
VRK3-201ENST00000316763 ODF3L2Q3SX64 289 aa10.27□□□□□ -0.77
VRK3-201ENST00000316763 CFAP126Q5VTH2 177 aa10.27□□□□□ -0.77
VRK3-201ENST00000316763 STHQ8IWL8 128 aa10.27□□□□□ -0.77
VRK3-201ENST00000316763 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
VRK3-201ENST00000316763 VPS25Q9BRG1 176 aa10.27□□□□□ -0.77
VRK3-201ENST00000316763 SPANXB1Q9NS25 103 aaPredicted RBP10.27□□□□□ -0.77
VRK3-201ENST00000316763 A0A0J9YY99 117 aa10.26□□□□□ -0.77
VRK3-201ENST00000316763 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
VRK3-201ENST00000316763 C11orf72Q8NBR9 251 aa10.26□□□□□ -0.77
VRK3-201ENST00000316763 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
VRK3-201ENST00000316763 WFDC9Q8NEX5 89 aa10.25□□□□□ -0.77
VRK3-201ENST00000316763 FAM110AQ9BQ89 295 aa10.25□□□□□ -0.77
VRK3-201ENST00000316763 ANK2Q01484 3957 aa10.25□□□□□ -0.77
VRK3-201ENST00000316763 NACAE9PAV3 2078 aa10.25□□□□□ -0.77
VRK3-201ENST00000316763 PRM2P04554 102 aa10.25□□□□□ -0.77
VRK3-201ENST00000316763 INSL3P51460 131 aa10.25□□□□□ -0.77
VRK3-201ENST00000316763 RS1O15537 224 aa10.24□□□□□ -0.77
VRK3-201ENST00000316763 IGHV3-53P01767 116 aa10.24□□□□□ -0.77
VRK3-201ENST00000316763 ZNF22P17026 224 aaPredicted RBP10.24□□□□□ -0.77
VRK3-201ENST00000316763 CMC4P56277 68 aaPredicted RBP10.24□□□□□ -0.77
VRK3-201ENST00000316763 TSPEAR-AS2P59090 65 aa10.24□□□□□ -0.77
VRK3-201ENST00000316763 SLC25A29Q8N8R3 303 aa10.24□□□□□ -0.77
VRK3-201ENST00000316763 A0A0J9YXV3 536 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 AMELXQ99217 191 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 SPANXA1Q9NS26 97 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 MRPL16Q9NX20 251 aaKnown RBP10.23□□□□□ -0.77
VRK3-201ENST00000316763 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 F8W1H4 67 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 UBE2D1P51668 147 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 C19orf73Q9NVV2 129 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 PGPEP1Q9NXJ5 209 aa10.23□□□□□ -0.77
VRK3-201ENST00000316763 NOTCH3Q9UM47 2321 aa10.22□□□□□ -0.77
VRK3-201ENST00000316763 Q6ZSN1 163 aa10.22□□□□□ -0.77
VRK3-201ENST00000316763 COTL1Q14019 142 aa10.21□□□□□ -0.77
VRK3-201ENST00000316763 PKD1L1Q8TDX9 2849 aa10.21□□□□□ -0.77
VRK3-201ENST00000316763 G3V4G9 280 aa10.21□□□□□ -0.78
VRK3-201ENST00000316763 IGHV3-30P01768 117 aa10.21□□□□□ -0.78
VRK3-201ENST00000316763 IGHV3-30-5P0DP03 117 aa10.21□□□□□ -0.78
VRK3-201ENST00000316763 MRPS36P82909 103 aaKnown RBP10.21□□□□□ -0.78
VRK3-201ENST00000316763 LYRM7Q5U5X0 104 aa10.21□□□□□ -0.78
VRK3-201ENST00000316763 CHCHD7Q9BUK0 85 aa10.21□□□□□ -0.78
VRK3-201ENST00000316763 PCP4P48539 62 aa10.2□□□□□ -0.78
VRK3-201ENST00000316763 IGHV3OR16-12A0A075B7B8 117 aa10.19□□□□□ -0.78
VRK3-201ENST00000316763 APOMO95445 188 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms