RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 IL17DQ8TAD2 202 aa13.8□□□□□ -0.2
CD55-201ENST00000314754 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
CD55-201ENST00000314754 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
CD55-201ENST00000314754 H3BRM9 83 aa13.79□□□□□ -0.2
CD55-201ENST00000314754 PRADC1Q9BSG0 188 aa13.79□□□□□ -0.2
CD55-201ENST00000314754 MYMXA0A1B0GTQ4 84 aa13.79□□□□□ -0.2
CD55-201ENST00000314754 C9orf118A6NHY6 69 aa13.79□□□□□ -0.2
CD55-201ENST00000314754 KRTAP10-3P60369 221 aa13.79□□□□□ -0.2
CD55-201ENST00000314754 NDUFA11Q86Y39 141 aa13.79□□□□□ -0.2
CD55-201ENST00000314754 C19orf73Q9NVV2 129 aa13.78□□□□□ -0.2
CD55-201ENST00000314754 NSD1Q96L73 2696 aaPredicted RBP13.78□□□□□ -0.2
CD55-201ENST00000314754 K7EP34 96 aa13.78□□□□□ -0.2
CD55-201ENST00000314754 GCSHP23434 173 aa13.78□□□□□ -0.2
CD55-201ENST00000314754 EMP1P54849 157 aa13.78□□□□□ -0.2
CD55-201ENST00000314754 TMEM263Q8WUH6 116 aaKnown RBP13.77□□□□□ -0.21
CD55-201ENST00000314754 DNAJC30Q96LL9 226 aa13.77□□□□□ -0.21
CD55-201ENST00000314754 GIG44P09565 113 aaPredicted RBP13.76□□□□□ -0.21
CD55-201ENST00000314754 HERVK_113P61574 105 aa13.76□□□□□ -0.21
CD55-201ENST00000314754 TAL2Q16559 108 aa13.76□□□□□ -0.21
CD55-201ENST00000314754 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
CD55-201ENST00000314754 OPRPNQ99935 248 aaPredicted RBP13.76□□□□□ -0.21
CD55-201ENST00000314754 PYGO1Q9Y3Y4 419 aa13.76□□□□□ -0.21
CD55-201ENST00000314754 FXYD2P54710 66 aa13.75□□□□□ -0.21
CD55-201ENST00000314754 CEND1Q8N111 149 aa13.75□□□□□ -0.21
CD55-201ENST00000314754 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
CD55-201ENST00000314754 VWFP04275 2813 aa13.75□□□□□ -0.21
CD55-201ENST00000314754 IGLV4-3A0A075B6K6 122 aa13.75□□□□□ -0.21
CD55-201ENST00000314754 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
CD55-201ENST00000314754 NFE4Q86UQ8 179 aa13.75□□□□□ -0.21
CD55-201ENST00000314754 OR5A1Q8NGJ0 315 aa13.74□□□□□ -0.21
CD55-201ENST00000314754 TMEM170BQ5T4T1 132 aa13.73□□□□□ -0.21
CD55-201ENST00000314754 SVIPQ8NHG7 77 aa13.73□□□□□ -0.21
CD55-201ENST00000314754 VCX2Q9H322 139 aa13.73□□□□□ -0.21
CD55-201ENST00000314754 ZNF815PA8K554 130 aa13.72□□□□□ -0.21
CD55-201ENST00000314754 PF4P02776 101 aa13.72□□□□□ -0.21
CD55-201ENST00000314754 C1QTNF4Q9BXJ3 329 aa13.72□□□□□ -0.21
CD55-201ENST00000314754 C2CD3Q4AC94 2353 aa13.72□□□□□ -0.21
CD55-201ENST00000314754 INAFM1C9JVW0 142 aa13.72□□□□□ -0.21
CD55-201ENST00000314754 SCGB1A1P11684 91 aa13.72□□□□□ -0.21
CD55-201ENST00000314754 CRYBA4P53673 196 aa13.72□□□□□ -0.21
CD55-201ENST00000314754 FN1P02751 2386 aaKnown RBP13.72□□□□□ -0.21
CD55-201ENST00000314754 HIVEP1P15822 2718 aa13.71□□□□□ -0.21
CD55-201ENST00000314754 RPL35AP18077 110 aaKnown RBP13.71□□□□□ -0.21
CD55-201ENST00000314754 HIST1H4GQ99525 98 aa13.71□□□□□ -0.21
CD55-201ENST00000314754 CHCHD7Q9BUK0 85 aa13.71□□□□□ -0.21
CD55-201ENST00000314754 SMIM13P0DJ93 91 aa13.71□□□□□ -0.22
CD55-201ENST00000314754 Q6ZTI0 123 aa13.71□□□□□ -0.22
CD55-201ENST00000314754 LINC00482Q8N8I6 264 aa13.71□□□□□ -0.22
CD55-201ENST00000314754 DAZ2Q13117 558 aaKnown RBP13.7□□□□□ -0.22
CD55-201ENST00000314754 TENM1Q9UKZ4 2725 aa13.7□□□□□ -0.22
CD55-201ENST00000314754 TRBV7-3A0A075B6L6 115 aa13.7□□□□□ -0.22
CD55-201ENST00000314754 C16orf74Q96GX8 76 aa13.7□□□□□ -0.22
CD55-201ENST00000314754 AMELXQ99217 191 aa13.7□□□□□ -0.22
CD55-201ENST00000314754 H3BUT2 72 aa13.69□□□□□ -0.22
CD55-201ENST00000314754 CSNK1G2-AS1Q8NCQ2 148 aa13.69□□□□□ -0.22
CD55-201ENST00000314754 FAM104AQ969W3 186 aa13.69□□□□□ -0.22
CD55-201ENST00000314754 RAB37Q96AX2 223 aa13.69□□□□□ -0.22
CD55-201ENST00000314754 ZNF479Q96JC4 524 aa13.69□□□□□ -0.22
CD55-201ENST00000314754 SPANXA1Q9NS26 97 aa13.69□□□□□ -0.22
CD55-201ENST00000314754 TRAV4A0A0B4J268 109 aa13.68□□□□□ -0.22
CD55-201ENST00000314754 SCGB1D4Q6XE38 83 aa13.68□□□□□ -0.22
CD55-201ENST00000314754 PHLDA1Q8WV24 401 aaPredicted RBP13.68□□□□□ -0.22
CD55-201ENST00000314754 NOP10Q9NPE3 64 aaKnown RBP13.68□□□□□ -0.22
CD55-201ENST00000314754 TRBV10-1A0A0K0K1A3 114 aa13.67□□□□□ -0.22
CD55-201ENST00000314754 PLAC8L1A1L4L8 177 aa13.67□□□□□ -0.22
CD55-201ENST00000314754 NHP2Q9NX24 153 aaKnown RBP13.67□□□□□ -0.22
CD55-201ENST00000314754 UBE2D4Q9Y2X8 147 aa13.67□□□□□ -0.22
CD55-201ENST00000314754 IGHV3-38A0A0C4DH36 116 aa13.67□□□□□ -0.22
CD55-201ENST00000314754 A0A1W2PPM0 123 aa13.67□□□□□ -0.22
CD55-201ENST00000314754 A0A0J9YXV3 536 aa13.66□□□□□ -0.22
CD55-201ENST00000314754 TMEM223A0PJW6 202 aa13.66□□□□□ -0.22
CD55-201ENST00000314754 ZNF22P17026 224 aaPredicted RBP13.66□□□□□ -0.22
CD55-201ENST00000314754 CEMP1Q6PRD7 247 aaPredicted RBP13.66□□□□□ -0.22
CD55-201ENST00000314754 NAA38Q9BRA0 125 aaKnown RBP13.66□□□□□ -0.22
CD55-201ENST00000314754 K7EQD1 137 aa13.66□□□□□ -0.22
CD55-201ENST00000314754 TSPEAR-AS2P59090 65 aa13.66□□□□□ -0.22
CD55-201ENST00000314754 PLEKHB2Q96CS7 222 aa13.66□□□□□ -0.22
CD55-201ENST00000314754 J3QQQ9 107 aa13.65□□□□□ -0.22
CD55-201ENST00000314754 MRPS36P82909 103 aaKnown RBP13.65□□□□□ -0.22
CD55-201ENST00000314754 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
CD55-201ENST00000314754 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
CD55-201ENST00000314754 K7ERJ3 54 aa13.64□□□□□ -0.23
CD55-201ENST00000314754 RRN3P1Q2M238 152 aa13.64□□□□□ -0.23
CD55-201ENST00000314754 SPATA3Q8NHX4 192 aa13.64□□□□□ -0.23
CD55-201ENST00000314754 SPCS1Q9Y6A9 102 aa13.64□□□□□ -0.23
CD55-201ENST00000314754 RPL36AP83881 106 aaKnown RBP13.64□□□□□ -0.23
CD55-201ENST00000314754 RPL36ALQ969Q0 106 aaKnown RBP13.64□□□□□ -0.23
CD55-201ENST00000314754 LEPROTO15243 131 aa13.63□□□□□ -0.23
CD55-201ENST00000314754 LGALS3P17931 250 aaKnown RBP13.63□□□□□ -0.23
CD55-201ENST00000314754 OVOL2Q9BRP0 275 aa13.63□□□□□ -0.23
CD55-201ENST00000314754 A0A0J9YY99 117 aa13.62□□□□□ -0.23
CD55-201ENST00000314754 INSL3P51460 131 aa13.62□□□□□ -0.23
CD55-201ENST00000314754 RNASE13Q5GAN3 156 aaKnown RBP13.62□□□□□ -0.23
CD55-201ENST00000314754 SLC25A29Q8N8R3 303 aa13.62□□□□□ -0.23
CD55-201ENST00000314754 FABP2P12104 132 aa13.62□□□□□ -0.23
CD55-201ENST00000314754 SAMD5Q5TGI4 173 aa13.62□□□□□ -0.23
CD55-201ENST00000314754 TRGV2A0A075B6R0 118 aa13.61□□□□□ -0.23
CD55-201ENST00000314754 C12orf74Q32Q52 190 aa13.61□□□□□ -0.23
CD55-201ENST00000314754 DAZ4Q86SG3 579 aaKnown RBP13.61□□□□□ -0.23
CD55-201ENST00000314754 TIMM21Q9BVV7 248 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms