RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
MKS1-201ENST00000313863 J3QLI3 93 aa10.13□□□□□ -0.79
MKS1-201ENST00000313863 HOXD3P31249 432 aaPredicted RBP10.13□□□□□ -0.79
MKS1-201ENST00000313863 DEFB112Q30KQ8 113 aa10.13□□□□□ -0.79
MKS1-201ENST00000313863 Q6Q795 121 aa10.13□□□□□ -0.79
MKS1-201ENST00000313863 DUX5Q96PT3 197 aa10.13□□□□□ -0.79
MKS1-201ENST00000313863 BEX4Q9NWD9 120 aaPredicted RBP10.13□□□□□ -0.79
MKS1-201ENST00000313863 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.13□□□□□ -0.795e-7■■■■□ 20.7
MKS1-201ENST00000313863 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
MKS1-201ENST00000313863 AVPP01185 164 aa10.12□□□□□ -0.79
MKS1-201ENST00000313863 C2orf82Q6UX34 121 aa10.12□□□□□ -0.79
MKS1-201ENST00000313863 FAM104AQ969W3 186 aa10.12□□□□□ -0.79
MKS1-201ENST00000313863 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
MKS1-201ENST00000313863 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
MKS1-201ENST00000313863 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
MKS1-201ENST00000313863 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
MKS1-201ENST00000313863 COPS9Q8WXC6 57 aa10.11□□□□□ -0.79
MKS1-201ENST00000313863 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
MKS1-201ENST00000313863 LINC01356Q8N9X3 169 aa10.11□□□□□ -0.79
MKS1-201ENST00000313863 LINC00467Q9BRT7 94 aa10.11□□□□□ -0.79
MKS1-201ENST00000313863 CHCHD7Q9BUK0 85 aa10.11□□□□□ -0.79
MKS1-201ENST00000313863 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 HTN1P15515 57 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 TIRAPP58753 221 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 C10orf99Q6UWK7 81 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 KNCNA6PVL3 124 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 NHLRC4P0CG21 123 aaPredicted RBP10.1□□□□□ -0.79
MKS1-201ENST00000313863 RBMY1A1P0DJD3 496 aaKnown RBP10.1□□□□□ -0.79
MKS1-201ENST00000313863 RBMY1CP0DJD4 496 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 RBMY1FQ15415 496 aaKnown RBP10.1□□□□□ -0.79
MKS1-201ENST00000313863 ADAMTSL4-AS1Q5T5F5 129 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 TMEM61Q8N0U2 210 aa10.1□□□□□ -0.79
MKS1-201ENST00000313863 NDUFA1O15239 70 aa10.09□□□□□ -0.79
MKS1-201ENST00000313863 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
MKS1-201ENST00000313863 DEFB131AP59861 70 aa10.09□□□□□ -0.79
MKS1-201ENST00000313863 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
MKS1-201ENST00000313863 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
MKS1-201ENST00000313863 TEX49A0A1B0GTD5 131 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 H7C423 109 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 TTC32Q5I0X7 151 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 FAM240AA0A1B0GVK7 77 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 LST1O00453 97 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 PROK1P58294 105 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 PEMTQ9UBM1 199 aa10.08□□□□□ -0.8
MKS1-201ENST00000313863 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
MKS1-201ENST00000313863 SORL1Q92673 2214 aa10.07□□□□□ -0.8
MKS1-201ENST00000313863 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.06□□□□□ -0.8
MKS1-201ENST00000313863 IGKV2-29A2NJV5 120 aaPredicted RBP10.06□□□□□ -0.8
MKS1-201ENST00000313863 BEAN1Q3B7T3 259 aa10.06□□□□□ -0.8
MKS1-201ENST00000313863 RNASE13Q5GAN3 156 aaKnown RBP10.06□□□□□ -0.8
MKS1-201ENST00000313863 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
MKS1-201ENST00000313863 HERVK_113P63121 156 aa10.06□□□□□ -0.8
MKS1-201ENST00000313863 DEFB121Q5J5C9 76 aa10.06□□□□□ -0.8
MKS1-201ENST00000313863 RS1O15537 224 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 INSP01308 110 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 C15orf53Q8NAA6 179 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 LINC01587Q99440 93 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 ZNF702PQ9H963 129 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 CSPG4Q6UVK1 2322 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
MKS1-201ENST00000313863 ZFHX3Q15911 3703 aa10.04□□□□□ -0.8
MKS1-201ENST00000313863 NCOR2Q9Y618 2525 aa10.04□□□□□ -0.8
MKS1-201ENST00000313863 Q6ZSN1 163 aa10.04□□□□□ -0.8
MKS1-201ENST00000313863 SPTBN4Q9H254 2564 aa10.04□□□□□ -0.8
MKS1-201ENST00000313863 RBMY1BA6NDE4 496 aaKnown RBP10.03□□□□□ -0.8
MKS1-201ENST00000313863 RBMY1EA6NEQ0 496 aaKnown RBP10.03□□□□□ -0.8
MKS1-201ENST00000313863 RBMY1DP0C7P1 496 aaKnown RBP10.03□□□□□ -0.8
MKS1-201ENST00000313863 Q6YL49 198 aa10.03□□□□□ -0.8
MKS1-201ENST00000313863 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
MKS1-201ENST00000313863 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
MKS1-201ENST00000313863 NPC2P61916 151 aa10.03□□□□□ -0.8
MKS1-201ENST00000313863 C11orf72Q8NBR9 251 aa10.03□□□□□ -0.8
MKS1-201ENST00000313863 CLEC2BQ92478 149 aa10.03□□□□□ -0.8
MKS1-201ENST00000313863 FAM110AQ9BQ89 295 aa10.03□□□□□ -0.8
MKS1-201ENST00000313863 SLURP1P55000 103 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 FAM19A3Q7Z5A8 133 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 DYNLRB2Q8TF09 96 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 IGLV5-39A0A0G2JS06 123 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 GAGE12JA6NER3 117 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 A8MZ25 164 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 CRLF1O75462 422 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 GAGE7O76087 117 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 ACYP1P07311 99 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 GAGE4Q13068 117 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 MAP6D1Q9H9H5 199 aa10.02□□□□□ -0.81
MKS1-201ENST00000313863 CELSR1Q9NYQ6 3014 aa10.01□□□□□ -0.81
MKS1-201ENST00000313863 LINC00308Q8TCZ7 52 aa10.01□□□□□ -0.81
MKS1-201ENST00000313863 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
MKS1-201ENST00000313863 CHD8Q9HCK8 2581 aa10.01□□□□□ -0.81
MKS1-201ENST00000313863 IGHV3-38A0A0C4DH36 116 aa10□□□□□ -0.81
MKS1-201ENST00000313863 B5MCH6 92 aa10□□□□□ -0.81
MKS1-201ENST00000313863 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
MKS1-201ENST00000313863 SPG11Q96JI7 2443 aa10□□□□□ -0.81
MKS1-201ENST00000313863 Q9H8V8 135 aa10□□□□□ -0.81
MKS1-201ENST00000313863 COX7A2LO14548 114 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms