RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 OSTCQ9NRP0 149 aa9.52□□□□□ -0.88
PPP1CA-201ENST00000312989 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 MIAQ16674 131 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 Q5VSD8 79 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 KCNIP4Q6PIL6 250 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 CLPSL2Q6UWE3 100 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 ISOC2Q96AB3 205 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 RNF185Q96GF1 192 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 C1orf43Q9BWL3 253 aa9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
PPP1CA-201ENST00000312989 FAM231BA6NCW3 169 aa9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 HIGD1CA8MV81 97 aa9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 EPM2AB3EWF7 344 aa9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 RPL23P62829 140 aaKnown RBP9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 TMEM243Q9BU79 118 aa9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 CRPP02741 224 aa9.5□□□□□ -0.89
PPP1CA-201ENST00000312989 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
PPP1CA-201ENST00000312989 REG3AQ06141 175 aa9.49□□□□□ -0.89
PPP1CA-201ENST00000312989 TMEM191AQ9H0A3 160 aa9.49□□□□□ -0.89
PPP1CA-201ENST00000312989 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
PPP1CA-201ENST00000312989 RPS10P46783 165 aaKnown RBP9.48□□□□□ -0.89
PPP1CA-201ENST00000312989 COTL1Q14019 142 aa9.48□□□□□ -0.89
PPP1CA-201ENST00000312989 NUP35Q8NFH5 326 aa9.48□□□□□ -0.89
PPP1CA-201ENST00000312989 SDHAF1A6NFY7 115 aa9.47□□□□□ -0.89
PPP1CA-201ENST00000312989 PRSS1P07477 247 aa9.47□□□□□ -0.89
PPP1CA-201ENST00000312989 AMTP48728 403 aa9.47□□□□□ -0.89
PPP1CA-201ENST00000312989 TMEM241Q24JQ0 296 aa9.47□□□□□ -0.89
PPP1CA-201ENST00000312989 FAM74A3Q4VXF1 159 aa9.47□□□□□ -0.89
PPP1CA-201ENST00000312989 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
PPP1CA-201ENST00000312989 RAB4AP20338 218 aa9.46□□□□□ -0.9
PPP1CA-201ENST00000312989 AMN1Q8IY45 258 aa9.46□□□□□ -0.9
PPP1CA-201ENST00000312989 IGLV10-54A0A075B6I4 117 aa9.45□□□□□ -0.9
PPP1CA-201ENST00000312989 NCR2O95944 276 aa9.45□□□□□ -0.9
PPP1CA-201ENST00000312989 ESDP10768 282 aa9.45□□□□□ -0.9
PPP1CA-201ENST00000312989 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
PPP1CA-201ENST00000312989 SCXQ7RTU7 201 aa9.45□□□□□ -0.9
PPP1CA-201ENST00000312989 NAT8Q9UHE5 227 aa9.45□□□□□ -0.9
PPP1CA-201ENST00000312989 PKHD1L1Q86WI1 4243 aa9.44□□□□□ -0.9
PPP1CA-201ENST00000312989 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
PPP1CA-201ENST00000312989 TSHBP01222 138 aa9.44□□□□□ -0.9
PPP1CA-201ENST00000312989 SMIM15Q7Z3B0 74 aa9.44□□□□□ -0.9
PPP1CA-201ENST00000312989 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
PPP1CA-201ENST00000312989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.43□□□□□ -0.9
PPP1CA-201ENST00000312989 TRAV8-4A0A0B4J246 113 aa9.43□□□□□ -0.9
PPP1CA-201ENST00000312989 IGKV2-29A2NJV5 120 aaPredicted RBP9.43□□□□□ -0.9
PPP1CA-201ENST00000312989 KRTAP10-4P60372 401 aaPredicted RBP9.43□□□□□ -0.9
PPP1CA-201ENST00000312989 ADIRFQ15847 76 aa9.43□□□□□ -0.9
PPP1CA-201ENST00000312989 C14orf177Q52M58 125 aa9.43□□□□□ -0.9
PPP1CA-201ENST00000312989 NRACQ8N912 160 aa9.43□□□□□ -0.9
PPP1CA-201ENST00000312989 TRBV27A0A0K0K1C4 114 aa9.42□□□□□ -0.9
PPP1CA-201ENST00000312989 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
PPP1CA-201ENST00000312989 SLPIP03973 132 aa9.42□□□□□ -0.9
PPP1CA-201ENST00000312989 PEA15Q15121 130 aa9.42□□□□□ -0.9
PPP1CA-201ENST00000312989 MRAP2Q96G30 205 aa9.42□□□□□ -0.9
PPP1CA-201ENST00000312989 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 H7C423 109 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 I3L3M4 83 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 APCSP02743 223 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 FGF6P10767 208 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 BORCS7Q96B45 105 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 NAT8BQ9UHF3 227 aa9.41□□□□□ -0.9
PPP1CA-201ENST00000312989 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 A0A1B0GXF2 115 aa9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 PANO1I0J062 215 aa9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 UBE2L6O14933 153 aa9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 INAFM2P0DMQ5 153 aa9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 RIGQ13278 110 aa9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 C9orf163Q8N9P6 203 aa9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 CIRBP-AS1Q8TBR5 109 aa9.4□□□□□ -0.9
PPP1CA-201ENST00000312989 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
PPP1CA-201ENST00000312989 FAM104BQ5XKR9 115 aa9.39□□□□□ -0.91
PPP1CA-201ENST00000312989 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
PPP1CA-201ENST00000312989 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
PPP1CA-201ENST00000312989 ST20Q9HBF5 79 aa9.39□□□□□ -0.91
PPP1CA-201ENST00000312989 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
PPP1CA-201ENST00000312989 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
PPP1CA-201ENST00000312989 FAM229AH3BQW9 127 aa9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 PMCHP20382 165 aa9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 SDIM1Q6ZPB5 146 aa9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 MRPL52Q86TS9 123 aaKnown RBP9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 CLRN3Q8NCR9 226 aa9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 ZNF25P17030 456 aaPredicted RBP9.37□□□□□ -0.91
PPP1CA-201ENST00000312989 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 SUMO2P61956 95 aaKnown RBP9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 FOXI1Q12951 378 aa9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 CHCHD10Q8WYQ3 142 aaPredicted RBP9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 CDC42SE2Q9NRR3 84 aa9.36□□□□□ -0.91
PPP1CA-201ENST00000312989 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
PPP1CA-201ENST00000312989 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms