RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 C1orf43Q9BWL3 253 aa6.71□□□□□ -1.34
COL6A5-202ENST00000312481 NRACQ8N912 160 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 B5MCH6 92 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 U3KQE9 123 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 G3V318 75 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 NDUFA7O95182 113 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 NXPH4O95158 308 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 TMEM61Q8N0U2 210 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 UBE2D3P61077 147 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 UBE2D2P62837 147 aa6.7□□□□□ -1.34
COL6A5-202ENST00000312481 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 NREPQ16612 68 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 AMTNQ6UX39 209 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 Q8N6K4 173 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 IGHV3-16A0A0C4DH30 117 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 NUPR1O60356 82 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 LINC00205P59089 165 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 WFDC2Q14508 124 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 PRO0255Q9UI72 69 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 TCL1BO95988 128 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 LYNX1G3V0Z9 82 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 LYNX1P0DP58 116 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 TRAV26-2A0A0B4J265 109 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 K7EQG2 157 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 HAMPP81172 84 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 IGHV3-30P01768 117 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 IGHV3-30-5P0DP03 117 aa6.69□□□□□ -1.34
COL6A5-202ENST00000312481 ANGP03950 147 aaKnown RBP6.68□□□□□ -1.34
COL6A5-202ENST00000312481 ADORA2A-AS1P86434 159 aa6.68□□□□□ -1.34
COL6A5-202ENST00000312481 M0QY20 66 aa6.68□□□□□ -1.34
COL6A5-202ENST00000312481 RPL39LQ96EH5 51 aaKnown RBP6.68□□□□□ -1.34
COL6A5-202ENST00000312481 UBE2D1P51668 147 aa6.68□□□□□ -1.34
COL6A5-202ENST00000312481 NAA38Q9BRA0 125 aaKnown RBP6.68□□□□□ -1.34
COL6A5-202ENST00000312481 CDPF1Q6NVV7 123 aa6.68□□□□□ -1.34
COL6A5-202ENST00000312481 BRWD1-AS2P59051 145 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 ZFAND2AQ8N6M9 145 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 TFF1P04155 84 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 EP400Q96L91 3159 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 A6NDX4 124 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 IGKV2D-26A0A0A0MRZ7 120 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 A0A0U1RRA0 63 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 POLR2KP53803 58 aaKnown RBP6.67□□□□□ -1.34
COL6A5-202ENST00000312481 C9orf85Q96MD7 179 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 HHLA3Q9XRX5 114 aa6.67□□□□□ -1.34
COL6A5-202ENST00000312481 F5H768 121 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 WISP1O95388 367 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 GNLYP22749 145 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 Q6JHZ5 121 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 XCL2Q9UBD3 114 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 LINC00527Q9UJ94 153 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 COX7CP15954 63 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 ZNF22P17026 224 aaPredicted RBP6.66□□□□□ -1.34
COL6A5-202ENST00000312481 BRD3OSQ6XYD6 125 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
COL6A5-202ENST00000312481 SS18L2Q9UHA2 77 aa6.65□□□□□ -1.34
COL6A5-202ENST00000312481 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.34
COL6A5-202ENST00000312481 RPL18AQ02543 176 aaKnown RBP6.65□□□□□ -1.34
COL6A5-202ENST00000312481 RNF185Q96GF1 192 aa6.65□□□□□ -1.34
COL6A5-202ENST00000312481 KLK9Q9UKQ9 250 aa6.65□□□□□ -1.34
COL6A5-202ENST00000312481 A0A0J9YXV3 536 aa6.65□□□□□ -1.34
COL6A5-202ENST00000312481 PFN2P35080 140 aa6.65□□□□□ -1.34
COL6A5-202ENST00000312481 LINC00308Q8TCZ7 52 aa6.65□□□□□ -1.34
COL6A5-202ENST00000312481 TP53TG3Q9ULZ0 132 aa6.65□□□□□ -1.35
COL6A5-202ENST00000312481 IGHV3-73A0A0B4J1V6 119 aa6.65□□□□□ -1.35
COL6A5-202ENST00000312481 GNRH2O43555 120 aa6.65□□□□□ -1.35
COL6A5-202ENST00000312481 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.65□□□□□ -1.35
COL6A5-202ENST00000312481 Q6ZPA2 131 aa6.65□□□□□ -1.35
COL6A5-202ENST00000312481 SEM1Q6ZVN7 128 aa6.65□□□□□ -1.35
COL6A5-202ENST00000312481 Q8N7P7 452 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 MIFP14174 115 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 COX7BP24311 80 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 FXYD7P58549 80 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 C17orf77Q96MU5 243 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 DEFB130BP0DP73 79 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 DEFB130AP0DP74 79 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 DEFB113Q30KQ7 82 aa6.64□□□□□ -1.35
COL6A5-202ENST00000312481 GDF5OSQ5U4N7 250 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 PRR15LQ9BU68 103 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 DEFB121Q5J5C9 76 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 LINC01548A6NM66 108 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 LINC00173Q6ZV60 143 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 Q8IZM0 81 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 NOP10Q9NPE3 64 aaKnown RBP6.63□□□□□ -1.35
COL6A5-202ENST00000312481 RPL28P46779 137 aaKnown RBP6.63□□□□□ -1.35
COL6A5-202ENST00000312481 PROP1O75360 226 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 APRG1Q8IVJ8 170 aa6.63□□□□□ -1.35
COL6A5-202ENST00000312481 GYPEP15421 78 aa6.62□□□□□ -1.35
COL6A5-202ENST00000312481 CCL18P55774 89 aa6.62□□□□□ -1.35
COL6A5-202ENST00000312481 FASNP49327 2511 aaKnown RBP6.62□□□□□ -1.35
COL6A5-202ENST00000312481 ZNF80P51504 273 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms