RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 GDF5OSQ5U4N7 250 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 DSCAMO60469 2012 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 A0A1B0GXF2 115 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 LRP4O75096 1905 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 BPY2O14599 106 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 IGLV11-55A0A075B6I3 123 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 CTSGP08311 255 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 A6NDX4 124 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 IGHV3-30P01768 117 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 IGHV3-33P01772 117 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 IGHV3-30-5P0DP03 117 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
VPS41-202ENST00000310301 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.23□□□□□ -1.41
VPS41-202ENST00000310301 IGHV4OR15-8A0A075B7B6 117 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 A0A087WW49 117 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 TRBV7-3A0A075B6L6 115 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 H0Y9J4 135 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 SPRNQ5BIV9 151 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 C4orf3Q8WVX3 66 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 C16orf74Q96GX8 76 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 HIST2H2BDQ6DRA6 164 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 SCXQ7RTU7 201 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 ZNF106Q9H2Y7 1883 aaKnown RBP6.22□□□□□ -1.41
VPS41-202ENST00000310301 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
VPS41-202ENST00000310301 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.41
VPS41-202ENST00000310301 C11orf1Q9H5F2 150 aa6.21□□□□□ -1.41
VPS41-202ENST00000310301 NAV3Q8IVL0 2385 aa6.21□□□□□ -1.41
VPS41-202ENST00000310301 CDSNQ15517 529 aa6.21□□□□□ -1.41
VPS41-202ENST00000310301 DEFB136Q30KP8 78 aa6.21□□□□□ -1.41
VPS41-202ENST00000310301 MRPS12O15235 138 aaKnown RBP6.21□□□□□ -1.42
VPS41-202ENST00000310301 NDUFA1O15239 70 aa6.21□□□□□ -1.42
VPS41-202ENST00000310301 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.42
VPS41-202ENST00000310301 IGHV7-81A0A0B4J1V7 117 aa6.21□□□□□ -1.42
VPS41-202ENST00000310301 M0QXV9 152 aa6.21□□□□□ -1.42
VPS41-202ENST00000310301 IGLV2-14P01704 120 aa6.21□□□□□ -1.42
VPS41-202ENST00000310301 BLCAPP62952 87 aa6.21□□□□□ -1.42
VPS41-202ENST00000310301 IGLV2-8P01709 118 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 IGKV4-1P06312 121 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 COX7BP24311 80 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 PIK3CD-AS1Q5SR53 167 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 ATP5EP2Q5VTU8 51 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 MAPKAPK5-AS1Q8N8E1 139 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 FANCD2OSQ96PS1 177 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 MDFICQ9P1T7 246 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 PIEZO2Q9H5I5 2752 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 TRIAP1O43715 76 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 SLPIP03973 132 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 LINC00694P0DN24 101 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 SLURP1P55000 103 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 LINC00322Q6ZN03 302 aaPredicted RBP6.2□□□□□ -1.42
VPS41-202ENST00000310301 C5orf56Q8N8D9 126 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 PRRC2AP48634 2157 aaKnown RBP6.2□□□□□ -1.42
VPS41-202ENST00000310301 HIVEP3Q5T1R4 2406 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 ADAMTS20P59510 1910 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 PKD1L2Q7Z442 2459 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 Q8N7P7 452 aa6.2□□□□□ -1.42
VPS41-202ENST00000310301 DEFB1P60022 68 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 TIMM17BO60830 172 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 P0DMU3 169 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 FAM231AP0DMU4 169 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 FAM231CP0DMU5 169 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 TP53TG3Q9ULZ0 132 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 SPAG11BQ08648 103 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 C22orf34Q6ZV56 151 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 NEXN-AS1Q8NBZ9 246 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 UBE2AP49459 152 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
VPS41-202ENST00000310301 YPEL4Q96NS1 127 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 ESM1Q9NQ30 184 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 NACAE9PAV3 2078 aa6.19□□□□□ -1.42
VPS41-202ENST00000310301 E7EUB6 86 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 XGP55808 180 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 MSMPQ1L6U9 139 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 Q6ZSV7 163 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 Q6ZSR3 168 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 SMR3AQ99954 134 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 TRBV30A0A0K0K1B3 111 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 COX7CP15954 63 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 ARHGAP21Q5T5U3 1957 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 ZNF80P51504 273 aaPredicted RBP6.18□□□□□ -1.42
VPS41-202ENST00000310301 HHLA3Q9XRX5 114 aa6.18□□□□□ -1.42
VPS41-202ENST00000310301 IMUPQ9GZP8 106 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 TMEM223A0PJW6 202 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 TMEM263Q8WUH6 116 aaKnown RBP6.17□□□□□ -1.42
VPS41-202ENST00000310301 NUP210LQ5VU65 1888 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 USP17L23D6RBM5 183 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 NDUFC1O43677 76 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 IGLV1-47P01700 117 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 PLCE1Q9P212 2302 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 ZFYVE26Q68DK2 2539 aa6.17□□□□□ -1.42
VPS41-202ENST00000310301 ODF3L1Q8IXM7 274 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 Q8N9W7 124 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 A6NED7 52 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 CFAP126Q5VTH2 177 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms