RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 TMEM141Q96I45 108 aa16.13■□□□□ 0.17
PDLIM2-202ENST00000308354 PLAC8L1A1L4L8 177 aa16.13■□□□□ 0.17
PDLIM2-202ENST00000308354 IGHV3-53P01767 116 aa16.13■□□□□ 0.17
PDLIM2-202ENST00000308354 TRBV25-1A0A075B6N4 114 aa16.12■□□□□ 0.17
PDLIM2-202ENST00000308354 EMP1P54849 157 aa16.12■□□□□ 0.17
PDLIM2-202ENST00000308354 STAB1Q9NY15 2570 aa16.12■□□□□ 0.17
PDLIM2-202ENST00000308354 SEC11AP67812 179 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 PMVKQ15126 192 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 RRN3P1Q2M238 152 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 ZNF479Q96JC4 524 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 IGLV4-69A0A075B6H9 119 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 WFDC9Q8NEX5 89 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 OR4C5Q8NGB2 326 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 CST9LQ9H4G1 147 aa16.11■□□□□ 0.17
PDLIM2-202ENST00000308354 C20orf203Q8NBC4 194 aa16.1■□□□□ 0.17
PDLIM2-202ENST00000308354 C16orf74Q96GX8 76 aa16.1■□□□□ 0.17
PDLIM2-202ENST00000308354 CHAC1Q9BUX1 264 aa16.1■□□□□ 0.17
PDLIM2-202ENST00000308354 HIGD1BQ9P298 99 aa16.1■□□□□ 0.17
PDLIM2-202ENST00000308354 RHODO00212 210 aa16.1■□□□□ 0.17
PDLIM2-202ENST00000308354 OPRPNQ99935 248 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-202ENST00000308354 TNFRSF18Q9Y5U5 241 aa16.09■□□□□ 0.17
PDLIM2-202ENST00000308354 C11orf86A6NJI1 115 aa16.09■□□□□ 0.17
PDLIM2-202ENST00000308354 PRIMA1Q86XR5 153 aa16.09■□□□□ 0.17
PDLIM2-202ENST00000308354 CBY1Q9Y3M2 126 aa16.09■□□□□ 0.17
PDLIM2-202ENST00000308354 OR11H2Q8NH07 326 aa16.08■□□□□ 0.16
PDLIM2-202ENST00000308354 GAGE12BA1L429 117 aa16.07■□□□□ 0.16
PDLIM2-202ENST00000308354 GAGE7O76087 117 aa16.07■□□□□ 0.16
PDLIM2-202ENST00000308354 GAGE12FP0CL80 117 aa16.07■□□□□ 0.16
PDLIM2-202ENST00000308354 GAGE12GP0CL81 117 aa16.07■□□□□ 0.16
PDLIM2-202ENST00000308354 GAGE12IP0CL82 117 aa16.07■□□□□ 0.16
PDLIM2-202ENST00000308354 DAZ2Q13117 558 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-202ENST00000308354 MAST4O15021 2626 aa16.06■□□□□ 0.16
PDLIM2-202ENST00000308354 A6NDN8 102 aa16.05■□□□□ 0.16
PDLIM2-202ENST00000308354 E9PLD3 99 aa16.05■□□□□ 0.16
PDLIM2-202ENST00000308354 C3orf56Q8N813 242 aa16.05■□□□□ 0.16
PDLIM2-202ENST00000308354 PRADC1Q9BSG0 188 aa16.05■□□□□ 0.16
PDLIM2-202ENST00000308354 IGHV3-38A0A0C4DH36 116 aa16.04■□□□□ 0.16
PDLIM2-202ENST00000308354 GCSHP23434 173 aa16.04■□□□□ 0.16
PDLIM2-202ENST00000308354 PHLDA1Q8WV24 401 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-202ENST00000308354 TRGV2A0A075B6R0 118 aa16.03■□□□□ 0.16
PDLIM2-202ENST00000308354 K7EP13 123 aa16.03■□□□□ 0.16
PDLIM2-202ENST00000308354 OXLD1Q5BKU9 147 aa16.03■□□□□ 0.16
PDLIM2-202ENST00000308354 ZNRF2Q8NHG8 242 aa16.03■□□□□ 0.16
PDLIM2-202ENST00000308354 VAMP3Q15836 100 aa16.03■□□□□ 0.16
PDLIM2-202ENST00000308354 PAPPA-AS1Q5QFB9 102 aa16.03■□□□□ 0.16
PDLIM2-202ENST00000308354 TRAV4A0A0B4J268 109 aa16.02■□□□□ 0.16
PDLIM2-202ENST00000308354 MYMXA0A1B0GTQ4 84 aa16.02■□□□□ 0.16
PDLIM2-202ENST00000308354 CCL25O15444 150 aa16.02■□□□□ 0.16
PDLIM2-202ENST00000308354 FXYD2P54710 66 aa16.02■□□□□ 0.15
PDLIM2-202ENST00000308354 PKD1L1Q8TDX9 2849 aa16.01■□□□□ 0.15
PDLIM2-202ENST00000308354 IGLV4-3A0A075B6K6 122 aa16.01■□□□□ 0.15
PDLIM2-202ENST00000308354 UBE2V1Q13404 147 aa16.01■□□□□ 0.15
PDLIM2-202ENST00000308354 OVOL2Q9BRP0 275 aa16.01■□□□□ 0.15
PDLIM2-202ENST00000308354 PTTG1IPP53801 180 aa16■□□□□ 0.15
PDLIM2-202ENST00000308354 DEFB135Q30KP9 77 aa16■□□□□ 0.15
PDLIM2-202ENST00000308354 TMEM170BQ5T4T1 132 aa16■□□□□ 0.15
PDLIM2-202ENST00000308354 X6R8D5 127 aa16■□□□□ 0.15
PDLIM2-202ENST00000308354 SLC25A29Q8N8R3 303 aa15.99■□□□□ 0.15
PDLIM2-202ENST00000308354 CEMP1Q6PRD7 247 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-202ENST00000308354 H3BRM9 83 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 WIPF1O43516 503 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 DNAJC30Q96LL9 226 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 COL6A5A8TX70 2615 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 CEND1Q8N111 149 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 FAM104AQ969W3 186 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 CHCHD7Q9BUK0 85 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 VCX2Q9H322 139 aa15.98■□□□□ 0.15
PDLIM2-202ENST00000308354 ZNF815PA8K554 130 aa15.97■□□□□ 0.15
PDLIM2-202ENST00000308354 K7EQD1 137 aa15.97■□□□□ 0.15
PDLIM2-202ENST00000308354 DEFB130BP0DP73 79 aa15.97■□□□□ 0.15
PDLIM2-202ENST00000308354 DEFB130AP0DP74 79 aa15.97■□□□□ 0.15
PDLIM2-202ENST00000308354 HERVK_113P61574 105 aa15.97■□□□□ 0.15
PDLIM2-202ENST00000308354 AMMECR1LQ6DCA0 310 aa15.97■□□□□ 0.15
PDLIM2-202ENST00000308354 RAB37Q96AX2 223 aa15.97■□□□□ 0.15
PDLIM2-202ENST00000308354 PYGO1Q9Y3Y4 419 aa15.96■□□□□ 0.15
PDLIM2-202ENST00000308354 NFE4Q86UQ8 179 aa15.96■□□□□ 0.15
PDLIM2-202ENST00000308354 TM2D2Q9BX73 214 aa15.96■□□□□ 0.15
PDLIM2-202ENST00000308354 IGHV4-30-4P0DP06 118 aa15.95■□□□□ 0.14
PDLIM2-202ENST00000308354 NAA38Q9BRA0 125 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-202ENST00000308354 TRBV7-3A0A075B6L6 115 aa15.95■□□□□ 0.14
PDLIM2-202ENST00000308354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-202ENST00000308354 IGKV2-29A2NJV5 120 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-202ENST00000308354 DEFB4AO15263 64 aa15.95■□□□□ 0.14
PDLIM2-202ENST00000308354 HIST1H4GQ99525 98 aa15.95■□□□□ 0.14
PDLIM2-202ENST00000308354 GAGE12JA6NER3 117 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 C9orf118A6NHY6 69 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 APOC4P55056 127 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 GAGE4Q13068 117 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 GAGE5Q13069 117 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 GAGE13Q4V321 117 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 SHISA2Q6UWI4 295 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 A0A0J9YXV3 536 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 TSPEAR-AS2P59090 65 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 COTL1Q14019 142 aa15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 RNASE13Q5GAN3 156 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-202ENST00000308354 LOC100131303A0A0U1RQF7 123 aa15.93■□□□□ 0.14
PDLIM2-202ENST00000308354 K7ERJ3 54 aa15.93■□□□□ 0.14
PDLIM2-202ENST00000308354 KRTAP10-11P60412 298 aa15.93■□□□□ 0.14
PDLIM2-202ENST00000308354 TAL2Q16559 108 aa15.93■□□□□ 0.14
PDLIM2-202ENST00000308354 KIR2DL5BQ8NHK3 375 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms