RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SVIPQ8NHG7 77 aa6.4□□□□□ -1.39
PCDHB1-201ENST00000306549 ZNF581Q9P0T4 197 aa6.4□□□□□ -1.39
PCDHB1-201ENST00000306549 A0A0B4J2C4 111 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 TRBV10-1A0A0K0K1A3 114 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 LY6G6DO95868 133 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 NRGNQ92686 78 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 IGHV4OR15-8A0A075B7B6 117 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 A0A087WW49 117 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 A0A1W2PPM0 123 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 K7EP34 96 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 BPTFQ12830 3046 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 C19orf84I3L1E1 186 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 NCR3O14931 201 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 COX7BP24311 80 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 LINC01548A6NM66 108 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 INAFM1C9JVW0 142 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 A0A087WZ39 114 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 AGPAT4-IT1Q9H0P7 198 aa6.39□□□□□ -1.39
PCDHB1-201ENST00000306549 IGKV1-17P01599 117 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 ETDBQ3ZM63 59 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 ESM1Q9NQ30 184 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 MAST4O15021 2626 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 IGKV2-24A0A0C4DH68 120 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 TRBV6-1A0A0K0K1D8 114 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 MIFP14174 115 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 PYY3Q5JQD4 70 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 LYPD6Q86Y78 171 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 WI2-2373I1.2A0A1W2PRP0 233 aa6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 NTN5Q8WTR8 489 aaPredicted RBP6.38□□□□□ -1.39
PCDHB1-201ENST00000306549 ZNF664Q8N3J9 261 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 DIAPH2-AS1Q14236 149 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 CRYGDP07320 174 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 ANKRD39Q53RE8 183 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 V9GYV3 84 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 MAJINQ3KP22 176 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 C12orf74Q32Q52 190 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 ZNF292O60281 2723 aa6.37□□□□□ -1.39
PCDHB1-201ENST00000306549 FLNAP21333 2647 aaKnown RBP6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 PRB2P02812 416 aaPredicted RBP6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 IGHV1-58A0A0C4DH39 117 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 TMEM61Q8N0U2 210 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 CYYR1Q96J86 154 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 A4D1N5 150 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 K7EP13 123 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 UBE2D3P61077 147 aa6.36□□□□□ -1.39
PCDHB1-201ENST00000306549 H3BMG7 143 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 TRANK1O15050 2925 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 NPSP0C0P6 89 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 SPRNQ5BIV9 151 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 DEFB131BA0A096LNP1 70 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 LY6LH3BQJ8 138 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 BRI3O95415 125 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 ODF1Q14990 250 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 Q8N1Y9 231 aa6.35□□□□□ -1.39
PCDHB1-201ENST00000306549 H7C423 109 aa6.34□□□□□ -1.39
PCDHB1-201ENST00000306549 BPY2O14599 106 aa6.34□□□□□ -1.39
PCDHB1-201ENST00000306549 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
PCDHB1-201ENST00000306549 DEFB4AO15263 64 aa6.34□□□□□ -1.39
PCDHB1-201ENST00000306549 LINC00322Q6ZN03 302 aaPredicted RBP6.34□□□□□ -1.39
PCDHB1-201ENST00000306549 FAM19A1Q7Z5A9 133 aa6.34□□□□□ -1.39
PCDHB1-201ENST00000306549 UTRNP46939 3433 aa6.34□□□□□ -1.39
PCDHB1-201ENST00000306549 DKK2Q9UBU2 259 aa6.33□□□□□ -1.4
PCDHB1-201ENST00000306549 FAM110AQ9BQ89 295 aa6.33□□□□□ -1.4
PCDHB1-201ENST00000306549 A0A0J9YX75 114 aa6.33□□□□□ -1.4
PCDHB1-201ENST00000306549 KMT2BQ9UMN6 2715 aaPredicted RBP6.33□□□□□ -1.4
PCDHB1-201ENST00000306549 LECT2O14960 151 aa6.33□□□□□ -1.4
PCDHB1-201ENST00000306549 MSMPQ1L6U9 139 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 C3orf22Q8N5N4 141 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 TRAV10A0A0B4J240 114 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 K7ERJ3 54 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 TRAV26-1A0A087WT03 109 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 IGKV3D-7A0A0C4DH55 119 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 Q6ZSV7 163 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 LOC105371267A0A1B0GV96 52 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 FSHBP01225 129 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 DEFB114Q30KQ6 69 aa6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.32□□□□□ -1.4
PCDHB1-201ENST00000306549 PIK3CD-AS1Q5SR53 167 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 A0A0J9YXV3 536 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 NHLRC4P0CG21 123 aaPredicted RBP6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 IGLL1P15814 213 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 REG3AQ06141 175 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 C16orf95Q9H693 158 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 MAP6D1Q9H9H5 199 aa6.31□□□□□ -1.4
PCDHB1-201ENST00000306549 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
PCDHB1-201ENST00000306549 HECTD1Q9ULT8 2610 aa6.3□□□□□ -1.4
PCDHB1-201ENST00000306549 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms