RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 COTL1Q14019 142 aa7.56□□□□□ -1.2
CLP1-201ENST00000302731 DAZ4Q86SG3 579 aaKnown RBP7.56□□□□□ -1.2
CLP1-201ENST00000302731 CST9LQ9H4G1 147 aa7.56□□□□□ -1.2
CLP1-201ENST00000302731 DAZ3Q9NR90 486 aaKnown RBP7.56□□□□□ -1.2
CLP1-201ENST00000302731 ZMAT5Q9UDW3 170 aaKnown RBP7.56□□□□□ -1.2
CLP1-201ENST00000302731 Q9UF83 564 aa7.56□□□□□ -1.2
CLP1-201ENST00000302731 C12orf54Q6X4T0 127 aa7.55□□□□□ -1.2
CLP1-201ENST00000302731 PRIMA1Q86XR5 153 aa7.55□□□□□ -1.2
CLP1-201ENST00000302731 SLC25A29Q8N8R3 303 aa7.55□□□□□ -1.2
CLP1-201ENST00000302731 ZNRF2Q8NHG8 242 aa7.55□□□□□ -1.2
CLP1-201ENST00000302731 CHCHD7Q9BUK0 85 aa7.55□□□□□ -1.2
CLP1-201ENST00000302731 SPANXA1Q9NS26 97 aa7.55□□□□□ -1.2
CLP1-201ENST00000302731 JMJD1CQ15652 2540 aa7.55□□□□□ -1.2
CLP1-201ENST00000302731 LYRM9A8MSI8 78 aa7.54□□□□□ -1.2
CLP1-201ENST00000302731 UBE2D3P61077 147 aa7.54□□□□□ -1.2
CLP1-201ENST00000302731 UBE2D2P62837 147 aa7.54□□□□□ -1.2
CLP1-201ENST00000302731 EGFEM1PQ0D2K5 195 aa7.54□□□□□ -1.2
CLP1-201ENST00000302731 DEFB104AQ8WTQ1 72 aa7.54□□□□□ -1.2
CLP1-201ENST00000302731 TEP1Q99973 2627 aaKnown RBP7.53□□□□□ -1.2
CLP1-201ENST00000302731 IGLV4-69A0A075B6H9 119 aa7.53□□□□□ -1.2
CLP1-201ENST00000302731 IGLV4-3A0A075B6K6 122 aa7.53□□□□□ -1.2
CLP1-201ENST00000302731 NMUP48645 174 aa7.53□□□□□ -1.2
CLP1-201ENST00000302731 TIMM21Q9BVV7 248 aa7.53□□□□□ -1.2
CLP1-201ENST00000302731 TRGV4A0A0C4DH28 118 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 A8MZ25 164 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 IGHV4-30-4P0DP06 118 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 FHL2Q14192 279 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 C2orf91Q6ZV80 131 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 NFE4Q86UQ8 179 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 AMELXQ99217 191 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 GTSF1LQ9H1H1 148 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 VCX2Q9H322 139 aa7.52□□□□□ -1.2
CLP1-201ENST00000302731 ATRQ13535 2644 aa7.52□□□□□ -1.21
CLP1-201ENST00000302731 NOTCH3Q9UM47 2321 aa7.52□□□□□ -1.21
CLP1-201ENST00000302731 IGKV2D-26A0A0A0MRZ7 120 aa7.52□□□□□ -1.21
CLP1-201ENST00000302731 MIFP14174 115 aa7.52□□□□□ -1.21
CLP1-201ENST00000302731 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
CLP1-201ENST00000302731 PHLDA1Q8WV24 401 aaPredicted RBP7.52□□□□□ -1.21
CLP1-201ENST00000302731 PRADC1Q9BSG0 188 aa7.52□□□□□ -1.21
CLP1-201ENST00000302731 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
CLP1-201ENST00000302731 BAHCC1Q9P281 2608 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 C11orf86A6NJI1 115 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 E9PLD3 99 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 EMP1P54849 157 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
CLP1-201ENST00000302731 DEFB135Q30KP9 77 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 TMEM97Q5BJF2 176 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 PCP2Q8IVA1 136 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 RNF183Q96D59 192 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
CLP1-201ENST00000302731 CSDC2Q9Y534 153 aaKnown RBP7.51□□□□□ -1.21
CLP1-201ENST00000302731 GAGE12JA6NER3 117 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 LINC00694P0DN24 101 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 HERVK_113P61574 105 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 GAGE1Q13065 139 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 GAGE4Q13068 117 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 GAGE5Q13069 117 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 OXLD1Q5BKU9 147 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 COL5A1-AS1Q5SY13 56 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 FAM104AQ969W3 186 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
CLP1-201ENST00000302731 H7C423 109 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 DEFB130BP0DP73 79 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 DEFB130AP0DP74 79 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 HINT1P49773 126 aaPredicted RBP7.49□□□□□ -1.21
CLP1-201ENST00000302731 OPRPNQ99935 248 aaPredicted RBP7.49□□□□□ -1.21
CLP1-201ENST00000302731 TENM1Q9UKZ4 2725 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 NIPBLQ6KC79 2804 aaeCLIP7.49□□□□□ -1.21
CLP1-201ENST00000302731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.49□□□□□ -1.21
CLP1-201ENST00000302731 IGHV4-28A0A0C4DH34 117 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 IGKV2-29A2NJV5 120 aaPredicted RBP7.49□□□□□ -1.21
CLP1-201ENST00000302731 TCTAP57738 103 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 BATFQ16520 125 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 MPV17L2Q567V2 206 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 FAM222AQ5U5X8 452 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 SBSPONQ8IVN8 264 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 Q8NAQ8 132 aa7.49□□□□□ -1.21
CLP1-201ENST00000302731 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
CLP1-201ENST00000302731 HSD52Q0P140 79 aa7.48□□□□□ -1.21
CLP1-201ENST00000302731 BVES-AS1Q5T3Y7 98 aa7.48□□□□□ -1.21
CLP1-201ENST00000302731 NTM-AS1Q6ZSK4 140 aa7.48□□□□□ -1.21
CLP1-201ENST00000302731 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
CLP1-201ENST00000302731 PRO0255Q9UI72 69 aa7.48□□□□□ -1.21
CLP1-201ENST00000302731 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
CLP1-201ENST00000302731 TRAV8-6A0A0B4J262 113 aa7.47□□□□□ -1.21
CLP1-201ENST00000302731 TEX48A0A1B0GUV7 120 aa7.47□□□□□ -1.21
CLP1-201ENST00000302731 TMEM170BQ5T4T1 132 aa7.47□□□□□ -1.21
CLP1-201ENST00000302731 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
CLP1-201ENST00000302731 MYMXA0A1B0GTQ4 84 aa7.46□□□□□ -1.21
CLP1-201ENST00000302731 CEMP1Q6PRD7 247 aaPredicted RBP7.46□□□□□ -1.21
CLP1-201ENST00000302731 TMEM243Q9BU79 118 aa7.46□□□□□ -1.21
CLP1-201ENST00000302731 VWFP04275 2813 aa7.46□□□□□ -1.22
CLP1-201ENST00000302731 A0A0J9YXV3 536 aa7.45□□□□□ -1.22
CLP1-201ENST00000302731 LOC100131303A0A0U1RQF7 123 aa7.45□□□□□ -1.22
CLP1-201ENST00000302731 A0A1B0GV90 55 aa7.45□□□□□ -1.22
CLP1-201ENST00000302731 TINCRA0A1B0GVN0 87 aa7.45□□□□□ -1.22
CLP1-201ENST00000302731 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms