RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GAGE2AQ6NT46 116 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 C10orf105Q8TEF2 133 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 FBXL19-AS1Q494R0 122 aa9.99□□□□□ -0.81
CASC4-201ENST00000299957 SPANXB1Q9NS25 103 aaPredicted RBP9.99□□□□□ -0.81
CASC4-201ENST00000299957 H3BMM0 161 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 UBE2WQ96B02 151 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 C1QTNF4Q9BXJ3 329 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 ATRQ13535 2644 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 TM2D2Q9BX73 214 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
CASC4-201ENST00000299957 NDUFA11Q86Y39 141 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 Q8N6K4 173 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 SS18L2Q9UHA2 77 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
CASC4-201ENST00000299957 TRAV26-1A0A087WT03 109 aa9.97□□□□□ -0.81
CASC4-201ENST00000299957 PRSS47A8MTI9 375 aa9.97□□□□□ -0.81
CASC4-201ENST00000299957 C11orf71Q6IPW1 123 aa9.97□□□□□ -0.81
CASC4-201ENST00000299957 AVPP01185 164 aa9.97□□□□□ -0.81
CASC4-201ENST00000299957 C15orf53Q8NAA6 179 aa9.97□□□□□ -0.81
CASC4-201ENST00000299957 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
CASC4-201ENST00000299957 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
CASC4-201ENST00000299957 IGHV3-30-3P0DP02 117 aa9.96□□□□□ -0.82
CASC4-201ENST00000299957 C18orf65Q6ZTR6 163 aa9.96□□□□□ -0.82
CASC4-201ENST00000299957 A0A0J9YX75 114 aa9.96□□□□□ -0.82
CASC4-201ENST00000299957 LINC01619G3V211 115 aa9.96□□□□□ -0.82
CASC4-201ENST00000299957 EBI3Q14213 229 aa9.96□□□□□ -0.82
CASC4-201ENST00000299957 TEN1Q86WV5 123 aa9.96□□□□□ -0.82
CASC4-201ENST00000299957 CRPP02741 224 aa9.95□□□□□ -0.82
CASC4-201ENST00000299957 A0A0J9YY99 117 aa9.95□□□□□ -0.82
CASC4-201ENST00000299957 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
CASC4-201ENST00000299957 Q6ZUT4 128 aa9.94□□□□□ -0.82
CASC4-201ENST00000299957 TEX49A0A1B0GTD5 131 aa9.94□□□□□ -0.82
CASC4-201ENST00000299957 Q6ZSV7 163 aa9.94□□□□□ -0.82
CASC4-201ENST00000299957 FLNAP21333 2647 aaKnown RBP9.94□□□□□ -0.82
CASC4-201ENST00000299957 RHODO00212 210 aa9.94□□□□□ -0.82
CASC4-201ENST00000299957 UFSP1Q6NVU6 142 aa9.94□□□□□ -0.82
CASC4-201ENST00000299957 HIST1H4AP62805 103 aaKnown RBP9.93□□□□□ -0.82
CASC4-201ENST00000299957 TINCRA0A1B0GVN0 87 aa9.93□□□□□ -0.82
CASC4-201ENST00000299957 VPREB3Q9UKI3 123 aa9.93□□□□□ -0.82
CASC4-201ENST00000299957 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
CASC4-201ENST00000299957 HIST2H2BCQ6DN03 193 aa9.93□□□□□ -0.82
CASC4-201ENST00000299957 A6NDX4 124 aa9.92□□□□□ -0.82
CASC4-201ENST00000299957 MALP21145 153 aa9.92□□□□□ -0.82
CASC4-201ENST00000299957 LEPROTO15243 131 aa9.92□□□□□ -0.82
CASC4-201ENST00000299957 DEFB4AO15263 64 aa9.92□□□□□ -0.82
CASC4-201ENST00000299957 CDKN2A-AS1Q9UH64 79 aa9.91□□□□□ -0.82
CASC4-201ENST00000299957 IGLV10-54A0A075B6I4 117 aa9.91□□□□□ -0.82
CASC4-201ENST00000299957 XCL1P47992 114 aa9.91□□□□□ -0.82
CASC4-201ENST00000299957 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
CASC4-201ENST00000299957 NBEAL2Q6ZNJ1 2754 aa9.9□□□□□ -0.82
CASC4-201ENST00000299957 RHOHQ15669 191 aa9.9□□□□□ -0.82
CASC4-201ENST00000299957 TIMM17AQ99595 171 aa9.9□□□□□ -0.82
CASC4-201ENST00000299957 ZNF22P17026 224 aaPredicted RBP9.9□□□□□ -0.82
CASC4-201ENST00000299957 TSPEAR-AS2P59090 65 aa9.9□□□□□ -0.82
CASC4-201ENST00000299957 CFAP161Q6P656 301 aa9.9□□□□□ -0.82
CASC4-201ENST00000299957 M0QY20 66 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 ITPR3Q14573 2671 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 NDUFA7O95182 113 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 ELANEP08246 267 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 COPS9Q8WXC6 57 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 RNF183Q96D59 192 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 Q9HAA7 133 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 TRBV7-3A0A075B6L6 115 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 A0A0J9YXY3 114 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 CRIP2P52943 208 aaPredicted RBP9.89□□□□□ -0.83
CASC4-201ENST00000299957 SRSF2Q01130 221 aaKnown RBP9.89□□□□□ -0.83
CASC4-201ENST00000299957 GPHB5Q86YW7 130 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 LINC00467Q9BRT7 94 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 CNFNQ9BYD5 112 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 ICOSQ9Y6W8 199 aa9.89□□□□□ -0.83
CASC4-201ENST00000299957 IGLV4-3A0A075B6K6 122 aa9.88□□□□□ -0.83
CASC4-201ENST00000299957 CRYBA4P53673 196 aa9.88□□□□□ -0.83
CASC4-201ENST00000299957 NFE4Q86UQ8 179 aa9.88□□□□□ -0.83
CASC4-201ENST00000299957 EDA2RQ9HAV5 297 aa9.88□□□□□ -0.83
CASC4-201ENST00000299957 SLC25A29Q8N8R3 303 aa9.88□□□□□ -0.83
CASC4-201ENST00000299957 TMEM243Q9BU79 118 aa9.88□□□□□ -0.83
CASC4-201ENST00000299957 Q6ZTI0 123 aa9.87□□□□□ -0.83
CASC4-201ENST00000299957 MGAM2Q2M2H8 2515 aa9.87□□□□□ -0.83
CASC4-201ENST00000299957 CRLF1O75462 422 aa9.87□□□□□ -0.83
CASC4-201ENST00000299957 DSCR9P59020 149 aa9.87□□□□□ -0.83
CASC4-201ENST00000299957 SMG1Q96Q15 3661 aaKnown RBP9.87□□□□□ -0.83
CASC4-201ENST00000299957 CUBNO60494 3623 aa9.87□□□□□ -0.83
CASC4-201ENST00000299957 H3BUA1 57 aa9.87□□□□□ -0.83
CASC4-201ENST00000299957 WFDC10AQ9H1F0 79 aa9.87□□□□□ -0.83
CASC4-201ENST00000299957 IGLV2-18A0A075B6J9 118 aa9.86□□□□□ -0.83
CASC4-201ENST00000299957 K7EQG2 157 aa9.86□□□□□ -0.83
CASC4-201ENST00000299957 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
CASC4-201ENST00000299957 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
CASC4-201ENST00000299957 CRYGDP07320 174 aa9.86□□□□□ -0.83
CASC4-201ENST00000299957 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
CASC4-201ENST00000299957 RBMY1A1P0DJD3 496 aaKnown RBP9.86□□□□□ -0.83
CASC4-201ENST00000299957 RBMY1CP0DJD4 496 aa9.86□□□□□ -0.83
CASC4-201ENST00000299957 IFITM1P13164 125 aa9.86□□□□□ -0.83
CASC4-201ENST00000299957 XGP55808 180 aa9.86□□□□□ -0.83
CASC4-201ENST00000299957 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
CASC4-201ENST00000299957 POLR2KP53803 58 aaKnown RBP9.85□□□□□ -0.83
CASC4-201ENST00000299957 ZANQ9Y493 2812 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms