RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 LINC00310P59036 64 aa11.2□□□□□ -0.62
NPM1-201ENST00000296930 COA6Q5JTJ3 125 aaKnown RBP11.2□□□□□ -0.62
NPM1-201ENST00000296930 CIDEAO60543 219 aa11.19□□□□□ -0.62
NPM1-201ENST00000296930 SPATA12Q7Z6I5 190 aa11.19□□□□□ -0.62
NPM1-201ENST00000296930 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
NPM1-201ENST00000296930 URB1-AS1Q96HZ7 61 aa11.18□□□□□ -0.62
NPM1-201ENST00000296930 S100A6P06703 90 aa11.18□□□□□ -0.62
NPM1-201ENST00000296930 LYPD5Q6UWN5 251 aa11.18□□□□□ -0.62
NPM1-201ENST00000296930 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
NPM1-201ENST00000296930 Q9UF83 564 aa11.18□□□□□ -0.62
NPM1-201ENST00000296930 H7C1H1 209 aa11.17□□□□□ -0.62
NPM1-201ENST00000296930 PPP1R17O96001 155 aa11.17□□□□□ -0.62
NPM1-201ENST00000296930 MAP1LC3AQ9H492 121 aa11.17□□□□□ -0.62
NPM1-201ENST00000296930 TRBV6-5A0A0K0K1A5 114 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 LOC389332A0A1B0GUA5 103 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 NUPR1O60356 82 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 SERF1AO75920 110 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 SUMO2P61956 95 aaKnown RBP11.16□□□□□ -0.62
NPM1-201ENST00000296930 SLC25A29Q8N8R3 303 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 NIT2Q9NQR4 276 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 K7EQD1 137 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 IFI27P40305 119 aaPredicted RBP11.16□□□□□ -0.62
NPM1-201ENST00000296930 SNRPEP62304 92 aaKnown RBP11.16□□□□□ -0.62
NPM1-201ENST00000296930 C20orf78Q9BR46 151 aa11.16□□□□□ -0.62
NPM1-201ENST00000296930 Q6ZRN7 208 aaPredicted RBP11.15□□□□□ -0.62
NPM1-201ENST00000296930 NIT1Q86X76 327 aa11.15□□□□□ -0.62
NPM1-201ENST00000296930 NEXN-AS1Q8NBZ9 246 aa11.15□□□□□ -0.62
NPM1-201ENST00000296930 LRP1BQ9NZR2 4599 aa11.15□□□□□ -0.63
NPM1-201ENST00000296930 TRBV6-4A0A1B0GX49 114 aa11.14□□□□□ -0.63
NPM1-201ENST00000296930 GYPEP15421 78 aa11.14□□□□□ -0.63
NPM1-201ENST00000296930 PRSS3P2Q8NHM4 247 aa11.14□□□□□ -0.63
NPM1-201ENST00000296930 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
NPM1-201ENST00000296930 SMIM2Q9BVW6 85 aa11.14□□□□□ -0.63
NPM1-201ENST00000296930 ST20Q9HBF5 79 aa11.14□□□□□ -0.63
NPM1-201ENST00000296930 HSPG2P98160 4391 aa11.14□□□□□ -0.63
NPM1-201ENST00000296930 TRAV9-2A0A087WT02 112 aa11.13□□□□□ -0.63
NPM1-201ENST00000296930 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
NPM1-201ENST00000296930 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
NPM1-201ENST00000296930 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
NPM1-201ENST00000296930 RNASEKQ6P5S7 137 aaKnown RBP11.13□□□□□ -0.63
NPM1-201ENST00000296930 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
NPM1-201ENST00000296930 LINC00614P0C842 121 aa11.13□□□□□ -0.63
NPM1-201ENST00000296930 ESDP10768 282 aa11.13□□□□□ -0.63
NPM1-201ENST00000296930 RPL32P62910 135 aaKnown RBP11.13□□□□□ -0.63
NPM1-201ENST00000296930 NXT2Q9NPJ8 142 aaKnown RBP11.13□□□□□ -0.63
NPM1-201ENST00000296930 K7EP13 123 aa11.12□□□□□ -0.63
NPM1-201ENST00000296930 PMCHP20382 165 aa11.12□□□□□ -0.63
NPM1-201ENST00000296930 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
NPM1-201ENST00000296930 Q8N8P6 123 aa11.12□□□□□ -0.63
NPM1-201ENST00000296930 KRTAP4-5Q9BYR2 181 aa11.12□□□□□ -0.63
NPM1-201ENST00000296930 RHOHQ15669 191 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 PDZD11Q5EBL8 140 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 FA2HQ7L5A8 372 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 HIST3H2BBQ8N257 126 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 CHCHD1Q96BP2 118 aaKnown RBP11.11□□□□□ -0.63
NPM1-201ENST00000296930 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 AP5S1Q9NUS5 200 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 ABCA13Q86UQ4 5058 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 LOC100131303A0A0U1RQF7 123 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 LINC01546A6NGU7 62 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 EREGO14944 169 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 SH2D6Q7Z4S9 175 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 TNFRSF18Q9Y5U5 241 aa11.11□□□□□ -0.63
NPM1-201ENST00000296930 TRBV7-3A0A075B6L6 115 aa11.09□□□□□ -0.63
NPM1-201ENST00000296930 IFITM10A6NMD0 228 aa11.09□□□□□ -0.63
NPM1-201ENST00000296930 HSBP1O75506 76 aa11.09□□□□□ -0.63
NPM1-201ENST00000296930 WFDC10BQ8IUB3 73 aa11.09□□□□□ -0.63
NPM1-201ENST00000296930 PRADC1Q9BSG0 188 aa11.09□□□□□ -0.63
NPM1-201ENST00000296930 VCYO14598 125 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 TCAPO15273 167 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
NPM1-201ENST00000296930 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
NPM1-201ENST00000296930 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 LINC00694P0DN24 101 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 GAGE1Q13065 139 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 GAGE4Q13068 117 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 GAGE5Q13069 117 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 DEFB104AQ8WTQ1 72 aa11.08□□□□□ -0.64
NPM1-201ENST00000296930 A0A096LNJ9 63 aa11.07□□□□□ -0.64
NPM1-201ENST00000296930 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
NPM1-201ENST00000296930 TIRAPP58753 221 aa11.07□□□□□ -0.64
NPM1-201ENST00000296930 UBE2D3P61077 147 aa11.07□□□□□ -0.64
NPM1-201ENST00000296930 UBE2D2P62837 147 aa11.07□□□□□ -0.64
NPM1-201ENST00000296930 I3L3M4 83 aa11.06□□□□□ -0.64
NPM1-201ENST00000296930 AMTP48728 403 aa11.06□□□□□ -0.64
NPM1-201ENST00000296930 C10orf126Q8N4M7 172 aa11.06□□□□□ -0.64
NPM1-201ENST00000296930 KIR2DL4Q99706 377 aa11.06□□□□□ -0.64
NPM1-201ENST00000296930 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
NPM1-201ENST00000296930 IGHV3-38A0A0C4DH36 116 aa11.05□□□□□ -0.64
NPM1-201ENST00000296930 K7EMI3 77 aa11.05□□□□□ -0.64
NPM1-201ENST00000296930 TSHBP01222 138 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms