RNA–Protein interactions for RNA: ENST00000296027.4

CXCL5-201, Transcript of C-X-C motif chemokine ligand 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL5, Length 2,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5-201ENST00000296027 PTPN13Q12923 2485 aa9.77□□□□□ -0.84
CXCL5-201ENST00000296027 ABCA12Q86UK0 2595 aa9.77□□□□□ -0.85
CXCL5-201ENST00000296027 COX6B1P14854 86 aa9.77□□□□□ -0.85
CXCL5-201ENST00000296027 PMVKQ15126 192 aa9.77□□□□□ -0.85
CXCL5-201ENST00000296027 C4orf26Q17RF5 130 aa9.77□□□□□ -0.85
CXCL5-201ENST00000296027 BEX4Q9NWD9 120 aaPredicted RBP9.77□□□□□ -0.85
CXCL5-201ENST00000296027 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 M0QY20 66 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 LGALS9O00182 355 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 PRB1P04280 392 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 PRM2P04554 102 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 HOXD3P31249 432 aaPredicted RBP9.76□□□□□ -0.85
CXCL5-201ENST00000296027 SRSF9Q13242 221 aaKnown RBP eCLIP9.76□□□□□ -0.85
CXCL5-201ENST00000296027 TMEM170BQ5T4T1 132 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 TRBV27A0A0K0K1C4 114 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 ZNF876PQ49A33 203 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 C9orf153Q5TBE3 101 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 HIST2H2BDQ6DRA6 164 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
CXCL5-201ENST00000296027 ZNF469Q96JG9 3925 aaPredicted RBP9.75□□□□□ -0.85
CXCL5-201ENST00000296027 A0A096LNT2 108 aa9.75□□□□□ -0.85
CXCL5-201ENST00000296027 RRN3P1Q2M238 152 aa9.75□□□□□ -0.85
CXCL5-201ENST00000296027 C10orf126Q8N4M7 172 aa9.75□□□□□ -0.85
CXCL5-201ENST00000296027 HOXA3O43365 443 aaPredicted RBP9.75□□□□□ -0.85
CXCL5-201ENST00000296027 TSPEAR-AS2P59090 65 aa9.75□□□□□ -0.85
CXCL5-201ENST00000296027 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
CXCL5-201ENST00000296027 MYO9AB2RTY4 2548 aa9.74□□□□□ -0.85
CXCL5-201ENST00000296027 IGHV3-73A0A0B4J1V6 119 aa9.74□□□□□ -0.85
CXCL5-201ENST00000296027 KNCNA6PVL3 124 aa9.74□□□□□ -0.85
CXCL5-201ENST00000296027 DSCR9P59020 149 aa9.74□□□□□ -0.85
CXCL5-201ENST00000296027 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
CXCL5-201ENST00000296027 RBMY1A1P0DJD3 496 aaKnown RBP9.74□□□□□ -0.85
CXCL5-201ENST00000296027 RBMY1CP0DJD4 496 aa9.74□□□□□ -0.85
CXCL5-201ENST00000296027 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
CXCL5-201ENST00000296027 ODF3Q96PU9 254 aa9.74□□□□□ -0.85
CXCL5-201ENST00000296027 NAV2Q8IVL1 2488 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 TRBV6-5A0A0K0K1A5 114 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 LINC01619G3V211 115 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 P0DMU3 169 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 FAM231AP0DMU4 169 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 FAM231CP0DMU5 169 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 CFAP126Q5VTH2 177 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 ZNF702PQ9H963 129 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 SLURP1P55000 103 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 TEN1Q86WV5 123 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
CXCL5-201ENST00000296027 LINC01549A6NIU2 74 aa9.72□□□□□ -0.85
CXCL5-201ENST00000296027 PROK1P58294 105 aa9.72□□□□□ -0.85
CXCL5-201ENST00000296027 TLN2Q9Y4G6 2542 aa9.72□□□□□ -0.85
CXCL5-201ENST00000296027 A0A0J9YY99 117 aa9.72□□□□□ -0.85
CXCL5-201ENST00000296027 HERVK_113P61574 105 aa9.72□□□□□ -0.85
CXCL5-201ENST00000296027 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
CXCL5-201ENST00000296027 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.85
CXCL5-201ENST00000296027 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
CXCL5-201ENST00000296027 DEFB131AP59861 70 aa9.71□□□□□ -0.85
CXCL5-201ENST00000296027 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
CXCL5-201ENST00000296027 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
CXCL5-201ENST00000296027 Q5XG85 94 aa9.71□□□□□ -0.86
CXCL5-201ENST00000296027 Q6YL49 198 aa9.71□□□□□ -0.86
CXCL5-201ENST00000296027 C3orf22Q8N5N4 141 aa9.71□□□□□ -0.86
CXCL5-201ENST00000296027 UBE2E2Q96LR5 201 aa9.71□□□□□ -0.86
CXCL5-201ENST00000296027 Q9UF83 564 aa9.71□□□□□ -0.86
CXCL5-201ENST00000296027 ELANEP08246 267 aa9.7□□□□□ -0.86
CXCL5-201ENST00000296027 KRTAP10-9P60411 292 aa9.7□□□□□ -0.86
CXCL5-201ENST00000296027 NF1P21359 2839 aa9.7□□□□□ -0.86
CXCL5-201ENST00000296027 LOC107984156A0A0G2JMH3 177 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 UQCRQO14949 82 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 SMCPP49901 116 aaPredicted RBP9.68□□□□□ -0.86
CXCL5-201ENST00000296027 UBE2D1P51668 147 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 ARL17AQ8IVW1 177 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 I3L3M4 83 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 J3QQQ9 107 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 M0R2P5 195 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 IGHV4-31P0DP07 118 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 NSUN5P1Q3KNT7 163 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 AMELXQ99217 191 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 CHD6Q8TD26 2715 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 USP24Q9UPU5 2620 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 NIPBLQ6KC79 2804 aaeCLIP9.68□□□□□ -0.86
CXCL5-201ENST00000296027 EPG5Q9HCE0 2579 aa9.68□□□□□ -0.86
CXCL5-201ENST00000296027 CEMP1Q6PRD7 247 aaPredicted RBP9.67□□□□□ -0.86
CXCL5-201ENST00000296027 SPANXDQ9BXN6 97 aa9.67□□□□□ -0.86
CXCL5-201ENST00000296027 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
CXCL5-201ENST00000296027 RBMY1BA6NDE4 496 aaKnown RBP9.67□□□□□ -0.86
CXCL5-201ENST00000296027 RBMY1EA6NEQ0 496 aaKnown RBP9.67□□□□□ -0.86
CXCL5-201ENST00000296027 RBMY1DP0C7P1 496 aaKnown RBP9.67□□□□□ -0.86
CXCL5-201ENST00000296027 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
CXCL5-201ENST00000296027 LINC00526Q96FQ7 95 aa9.67□□□□□ -0.86
CXCL5-201ENST00000296027 CHCHD5Q9BSY4 110 aa9.67□□□□□ -0.86
CXCL5-201ENST00000296027 AKAP9Q99996 3911 aa9.67□□□□□ -0.86
CXCL5-201ENST00000296027 KMT2BQ9UMN6 2715 aaPredicted RBP9.67□□□□□ -0.86
CXCL5-201ENST00000296027 TRGV11A0A075B6L2 103 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms