RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 H3BUX3 64 aa7.56□□□□□ -1.2
LMX1A-201ENST00000294816 VSIG2Q96IQ7 327 aa7.56□□□□□ -1.2
LMX1A-201ENST00000294816 USMG5Q96IX5 58 aa7.56□□□□□ -1.2
LMX1A-201ENST00000294816 PRM2P04554 102 aa7.55□□□□□ -1.2
LMX1A-201ENST00000294816 NBL1P41271 181 aa7.55□□□□□ -1.2
LMX1A-201ENST00000294816 MRPL23Q16540 153 aaKnown RBP7.55□□□□□ -1.2
LMX1A-201ENST00000294816 SPANXDQ9BXN6 97 aa7.55□□□□□ -1.2
LMX1A-201ENST00000294816 SPANXCQ9NY87 97 aa7.55□□□□□ -1.2
LMX1A-201ENST00000294816 BSNQ9UPA5 3926 aa7.55□□□□□ -1.2
LMX1A-201ENST00000294816 DGAT2L7PQ6IED9 249 aa7.55□□□□□ -1.2
LMX1A-201ENST00000294816 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
LMX1A-201ENST00000294816 Q9UF83 564 aa7.54□□□□□ -1.2
LMX1A-201ENST00000294816 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
LMX1A-201ENST00000294816 MRPS36P82909 103 aaKnown RBP7.54□□□□□ -1.2
LMX1A-201ENST00000294816 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
LMX1A-201ENST00000294816 MAP1AP78559 2803 aaPredicted RBP7.54□□□□□ -1.2
LMX1A-201ENST00000294816 RS1O15537 224 aa7.54□□□□□ -1.2
LMX1A-201ENST00000294816 CIRBPQ14011 172 aaKnown RBP7.54□□□□□ -1.2
LMX1A-201ENST00000294816 DCANP1Q8TF63 244 aa7.54□□□□□ -1.2
LMX1A-201ENST00000294816 LINC01587Q99440 93 aa7.54□□□□□ -1.2
LMX1A-201ENST00000294816 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 LMO4P61968 165 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 TMEM126AQ9H061 195 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 SPANXA1Q9NS26 97 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 CDKN2A-AS1Q9UH64 79 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 VPREB3Q9UKI3 123 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 BRI3O95415 125 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 ADORA2A-AS1P86434 159 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 CELSR1Q9NYQ6 3014 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 NOTCH3Q9UM47 2321 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 LINC00694P0DN24 101 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 C19orf54Q5BKX5 351 aa7.53□□□□□ -1.2
LMX1A-201ENST00000294816 KLK5Q9Y337 293 aaPredicted RBP7.53□□□□□ -1.2
LMX1A-201ENST00000294816 ZNF292O60281 2723 aa7.52□□□□□ -1.2
LMX1A-201ENST00000294816 SPG11Q96JI7 2443 aa7.52□□□□□ -1.2
LMX1A-201ENST00000294816 TRBV7-7A0A0K0K1E9 115 aa7.52□□□□□ -1.21
LMX1A-201ENST00000294816 Q9H8V8 135 aa7.52□□□□□ -1.21
LMX1A-201ENST00000294816 FBXL19-AS1Q494R0 122 aa7.52□□□□□ -1.21
LMX1A-201ENST00000294816 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
LMX1A-201ENST00000294816 IGHV4-38-2P0DP08 117 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 DAZ2Q13117 558 aaKnown RBP7.51□□□□□ -1.21
LMX1A-201ENST00000294816 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
LMX1A-201ENST00000294816 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
LMX1A-201ENST00000294816 TINCRA0A1B0GVN0 87 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 LINC00467Q9BRT7 94 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 C2CD3Q4AC94 2353 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 BAALC-AS2P0C853 105 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 SYNJ2BPP57105 145 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 KLRB1Q12918 225 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 LINC01600Q96MT4 127 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
LMX1A-201ENST00000294816 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
LMX1A-201ENST00000294816 COL12A1Q99715 3063 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 LOC107984640A0A0U1RRK4 108 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 FAM104AQ969W3 186 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
LMX1A-201ENST00000294816 EDA2RQ9HAV5 297 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 IGHG2P01859 326 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 C10orf99Q6UWK7 81 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 C3orf22Q8N5N4 141 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
LMX1A-201ENST00000294816 COX7A2LO14548 114 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 ACYP1P07311 99 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 DEFB121Q5J5C9 76 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 Q8N2B8 174 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 Q9HAA7 133 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 IGF2RP11717 2491 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 HERVK_113P63121 156 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 Q6ZSN1 163 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 LINC00643Q86TS7 51 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 UBE2D4Q9Y2X8 147 aa7.49□□□□□ -1.21
LMX1A-201ENST00000294816 TRAV13-1A0A0B4J241 112 aa7.48□□□□□ -1.21
LMX1A-201ENST00000294816 NDUFA7O95182 113 aa7.48□□□□□ -1.21
LMX1A-201ENST00000294816 PRIMA1Q86XR5 153 aa7.48□□□□□ -1.21
LMX1A-201ENST00000294816 ZFHX3Q15911 3703 aa7.48□□□□□ -1.21
LMX1A-201ENST00000294816 CHCHD7Q9BUK0 85 aa7.48□□□□□ -1.21
LMX1A-201ENST00000294816 H3BUA1 57 aa7.47□□□□□ -1.21
LMX1A-201ENST00000294816 NDUFA1O15239 70 aa7.47□□□□□ -1.21
LMX1A-201ENST00000294816 COX6A2Q02221 97 aa7.47□□□□□ -1.21
LMX1A-201ENST00000294816 RBMY1A1P0DJD3 496 aaKnown RBP7.47□□□□□ -1.21
LMX1A-201ENST00000294816 RBMY1CP0DJD4 496 aa7.47□□□□□ -1.21
LMX1A-201ENST00000294816 RBMY1FQ15415 496 aaKnown RBP7.47□□□□□ -1.21
LMX1A-201ENST00000294816 K7EMT4 169 aa7.46□□□□□ -1.21
LMX1A-201ENST00000294816 K7EQG2 157 aa7.46□□□□□ -1.21
LMX1A-201ENST00000294816 UQCRQO14949 82 aa7.46□□□□□ -1.21
LMX1A-201ENST00000294816 TIRAPP58753 221 aa7.46□□□□□ -1.21
LMX1A-201ENST00000294816 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.46□□□□□ -1.21
LMX1A-201ENST00000294816 IMUPQ9GZP8 106 aa7.46□□□□□ -1.22
LMX1A-201ENST00000294816 K7ENP7 123 aa7.46□□□□□ -1.22
LMX1A-201ENST00000294816 DEFB131AP59861 70 aa7.46□□□□□ -1.22
LMX1A-201ENST00000294816 PIK3CD-AS1Q5SR53 167 aa7.46□□□□□ -1.22
LMX1A-201ENST00000294816 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
LMX1A-201ENST00000294816 HIVEP3Q5T1R4 2406 aa7.45□□□□□ -1.22
LMX1A-201ENST00000294816 TIMM17BO60830 172 aa7.45□□□□□ -1.22
LMX1A-201ENST00000294816 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
LMX1A-201ENST00000294816 A6NDX4 124 aa7.45□□□□□ -1.22
LMX1A-201ENST00000294816 SDIM1Q6ZPB5 146 aa7.45□□□□□ -1.22
LMX1A-201ENST00000294816 IGHV4-61A0A0C4DH41 118 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms