RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CKS2P33552 79 aa18.07■□□□□ 0.48
SSU72-201ENST00000291386 TNP2Q05952 138 aa18.07■□□□□ 0.48
SSU72-201ENST00000291386 NDUFA5Q16718 116 aa18.07■□□□□ 0.48
SSU72-201ENST00000291386 TMEM243Q9BU79 118 aa18.07■□□□□ 0.48
SSU72-201ENST00000291386 PPBPP02775 128 aa18.06■□□□□ 0.48
SSU72-201ENST00000291386 AMTP48728 403 aa18.06■□□□□ 0.48
SSU72-201ENST00000291386 MPV17L2Q567V2 206 aa18.06■□□□□ 0.48
SSU72-201ENST00000291386 APOC3P02656 99 aa18.05■□□□□ 0.48
SSU72-201ENST00000291386 PMCHP20382 165 aa18.05■□□□□ 0.48
SSU72-201ENST00000291386 SUMO2P61956 95 aaKnown RBP18.05■□□□□ 0.48
SSU72-201ENST00000291386 ATRAIDQ6UW56 229 aa18.05■□□□□ 0.48
SSU72-201ENST00000291386 SVBPQ8N300 66 aa18.05■□□□□ 0.48
SSU72-201ENST00000291386 RPS10P5Q9NQ39 176 aa18.05■□□□□ 0.48
SSU72-201ENST00000291386 TRAV8-3A0A0A6YYJ7 113 aa18.04■□□□□ 0.48
SSU72-201ENST00000291386 S100PP25815 95 aa18.04■□□□□ 0.48
SSU72-201ENST00000291386 GAGE6Q13070 117 aa18.04■□□□□ 0.48
SSU72-201ENST00000291386 C20orf78Q9BR46 151 aa18.04■□□□□ 0.48
SSU72-201ENST00000291386 KLK12Q9UKR0 248 aa18.04■□□□□ 0.48
SSU72-201ENST00000291386 D6R8Y8 96 aa18.03■□□□□ 0.48
SSU72-201ENST00000291386 VCYO14598 125 aa18.03■□□□□ 0.48
SSU72-201ENST00000291386 PHOX2AO14813 284 aa18.03■□□□□ 0.48
SSU72-201ENST00000291386 DEFB104AQ8WTQ1 72 aa18.03■□□□□ 0.48
SSU72-201ENST00000291386 A0A1B0GUV1 79 aa18.02■□□□□ 0.48
SSU72-201ENST00000291386 SNAPINO95295 136 aa18.02■□□□□ 0.48
SSU72-201ENST00000291386 APCSP02743 223 aa18.02■□□□□ 0.48
SSU72-201ENST00000291386 RPL32P62910 135 aaKnown RBP18.02■□□□□ 0.48
SSU72-201ENST00000291386 HECTD4Q9Y4D8 3996 aa18.02■□□□□ 0.48
SSU72-201ENST00000291386 PKD1P98161 4303 aa18.01■□□□□ 0.47
SSU72-201ENST00000291386 TNFRSF6BO95407 300 aa18.01■□□□□ 0.47
SSU72-201ENST00000291386 TSHBP01222 138 aa18.01■□□□□ 0.47
SSU72-201ENST00000291386 RBX1P62877 108 aa18.01■□□□□ 0.47
SSU72-201ENST00000291386 ORMDL3Q8N138 153 aa18.01■□□□□ 0.47
SSU72-201ENST00000291386 H7C423 109 aa18■□□□□ 0.47
SSU72-201ENST00000291386 Q8N976 141 aa18■□□□□ 0.47
SSU72-201ENST00000291386 Q9HAA7 133 aa18■□□□□ 0.47
SSU72-201ENST00000291386 UBE2L6O14933 153 aa17.99■□□□□ 0.47
SSU72-201ENST00000291386 TMEM136Q6ZRR5 245 aa17.99■□□□□ 0.47
SSU72-201ENST00000291386 ESDP10768 282 aa17.98■□□□□ 0.47
SSU72-201ENST00000291386 Q0VG73 95 aa17.98■□□□□ 0.47
SSU72-201ENST00000291386 NPYP01303 97 aa17.97■□□□□ 0.47
SSU72-201ENST00000291386 ANGP03950 147 aaKnown RBP17.97■□□□□ 0.47
SSU72-201ENST00000291386 TM2D2Q9BX73 214 aa17.97■□□□□ 0.47
SSU72-201ENST00000291386 LAMTOR2Q9Y2Q5 125 aa17.97■□□□□ 0.47
SSU72-201ENST00000291386 ENHOQ6UWT2 76 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 SLC7A5P1Q8MH63 180 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 UBE2WQ96B02 151 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 RMI2Q96E14 147 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 PRELID3AQ96N28 172 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 KIR2DL4Q99706 377 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 PRR34Q9NV39 138 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 COX11Q9Y6N1 276 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 DNAH11Q96DT5 4516 aa17.96■□□□□ 0.47
SSU72-201ENST00000291386 COX19Q49B96 90 aa17.95■□□□□ 0.46
SSU72-201ENST00000291386 C20orf203Q8NBC4 194 aa17.95■□□□□ 0.46
SSU72-201ENST00000291386 PRSS47A8MTI9 375 aa17.94■□□□□ 0.46
SSU72-201ENST00000291386 SMIM2Q9BVW6 85 aa17.94■□□□□ 0.46
SSU72-201ENST00000291386 TCAPO15273 167 aa17.93■□□□□ 0.46
SSU72-201ENST00000291386 CRPP02741 224 aa17.93■□□□□ 0.46
SSU72-201ENST00000291386 GNB1LQ9BYB4 327 aa17.93■□□□□ 0.46
SSU72-201ENST00000291386 IGLV4-60A0A075B6I1 120 aa17.92■□□□□ 0.46
SSU72-201ENST00000291386 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.92■□□□□ 0.46
SSU72-201ENST00000291386 IGKV2-29A2NJV5 120 aaPredicted RBP17.92■□□□□ 0.46
SSU72-201ENST00000291386 PSCAO43653 123 aa17.92■□□□□ 0.46
SSU72-201ENST00000291386 HLA-DQA1P01909 254 aa17.92■□□□□ 0.46
SSU72-201ENST00000291386 FCER1GP30273 86 aa17.92■□□□□ 0.46
SSU72-201ENST00000291386 A0A087WTM6 91 aa17.91■□□□□ 0.46
SSU72-201ENST00000291386 MIAQ16674 131 aa17.91■□□□□ 0.46
SSU72-201ENST00000291386 LINC00269Q8N2A0 174 aa17.91■□□□□ 0.46
SSU72-201ENST00000291386 BIRC6Q9NR09 4857 aa17.9■□□□□ 0.46
SSU72-201ENST00000291386 FGF6P10767 208 aa17.9■□□□□ 0.46
SSU72-201ENST00000291386 ZNF25P17030 456 aaPredicted RBP17.9■□□□□ 0.46
SSU72-201ENST00000291386 LRCOL1A6NCL2 159 aa17.89■□□□□ 0.45
SSU72-201ENST00000291386 AMMECR1LQ6DCA0 310 aa17.89■□□□□ 0.45
SSU72-201ENST00000291386 IGKV2D-24A0A075B6R9 120 aa17.88■□□□□ 0.45
SSU72-201ENST00000291386 EREGO14944 169 aa17.88■□□□□ 0.45
SSU72-201ENST00000291386 REG3AQ06141 175 aa17.88■□□□□ 0.45
SSU72-201ENST00000291386 MRPL52Q86TS9 123 aaKnown RBP17.88■□□□□ 0.45
SSU72-201ENST00000291386 MT-ND6P03923 174 aa17.87■□□□□ 0.45
SSU72-201ENST00000291386 C1orf43Q9BWL3 253 aa17.87■□□□□ 0.45
SSU72-201ENST00000291386 RNASEKQ6P5S7 137 aaKnown RBP17.86■□□□□ 0.45
SSU72-201ENST00000291386 MAP1LC3AQ9H492 121 aa17.86■□□□□ 0.45
SSU72-201ENST00000291386 MAPKAPK5-AS1Q8N8E1 139 aa17.85■□□□□ 0.45
SSU72-201ENST00000291386 TGIF2-C20orf24A0A0A6YYL0 155 aa17.84■□□□□ 0.45
SSU72-201ENST00000291386 TRAV8-4A0A0B4J246 113 aa17.84■□□□□ 0.45
SSU72-201ENST00000291386 SMAGPQ0VAQ4 97 aa17.83■□□□□ 0.44
SSU72-201ENST00000291386 CLPSL2Q6UWE3 100 aa17.83■□□□□ 0.44
SSU72-201ENST00000291386 SPATA12Q7Z6I5 190 aa17.83■□□□□ 0.44
SSU72-201ENST00000291386 TMEM18Q96B42 140 aa17.83■□□□□ 0.44
SSU72-201ENST00000291386 TMEM101Q96IK0 257 aa17.83■□□□□ 0.44
SSU72-201ENST00000291386 CSDC2Q9Y534 153 aaKnown RBP17.83■□□□□ 0.44
SSU72-201ENST00000291386 DYNC1H1Q14204 4646 aaKnown RBP17.82■□□□□ 0.44
SSU72-201ENST00000291386 KIAA1644Q3SXP7 199 aa17.82■□□□□ 0.44
SSU72-201ENST00000291386 Q8N8P6 123 aa17.82■□□□□ 0.44
SSU72-201ENST00000291386 KRTAP26-1Q6PEX3 210 aa17.81■□□□□ 0.44
SSU72-201ENST00000291386 OR5A1Q8NGJ0 315 aa17.81■□□□□ 0.44
SSU72-201ENST00000291386 YPEL4Q96NS1 127 aa17.81■□□□□ 0.44
SSU72-201ENST00000291386 TIMM21Q9BVV7 248 aa17.81■□□□□ 0.44
SSU72-201ENST00000291386 PKHD1P08F94 4074 aa17.81■□□□□ 0.44
SSU72-201ENST00000291386 RAB5AP20339 215 aa17.8■□□□□ 0.44
SSU72-201ENST00000291386 KRTAP10-2P60368 255 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms