RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 XCL1P47992 114 aa13.26□□□□□ -0.29
PCDHA13-201ENST00000289272 CEP192Q8TEP8 1941 aa13.26□□□□□ -0.29
PCDHA13-201ENST00000289272 MIR7-3HGQ8N6C7 128 aa13.26□□□□□ -0.29
PCDHA13-201ENST00000289272 FAM110AQ9BQ89 295 aa13.26□□□□□ -0.29
PCDHA13-201ENST00000289272 C14orf132Q9NPU4 83 aa13.26□□□□□ -0.29
PCDHA13-201ENST00000289272 BRK1Q8WUW1 75 aa13.25□□□□□ -0.29
PCDHA13-201ENST00000289272 PRR14LQ5THK1 2151 aa13.25□□□□□ -0.29
PCDHA13-201ENST00000289272 LRP4O75096 1905 aa13.25□□□□□ -0.29
PCDHA13-201ENST00000289272 CLUHP3Q96NS8 147 aa13.24□□□□□ -0.29
PCDHA13-201ENST00000289272 V9GYY9 64 aa13.24□□□□□ -0.29
PCDHA13-201ENST00000289272 BLCAPP62952 87 aa13.24□□□□□ -0.29
PCDHA13-201ENST00000289272 TRBV27A0A0K0K1C4 114 aa13.24□□□□□ -0.29
PCDHA13-201ENST00000289272 CCDC179H3BU77 68 aa13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 SPRY2O43597 315 aa13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 DIRC1Q969H9 104 aa13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 TNFRSF13BO14836 293 aaPredicted RBP13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 C22orf34Q6ZV56 151 aa13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 C5orf38Q86SI9 138 aa13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 NRACQ8N912 160 aa13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 LINC00308Q8TCZ7 52 aa13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 NOP10Q9NPE3 64 aaKnown RBP13.23□□□□□ -0.29
PCDHA13-201ENST00000289272 TNCP24821 2201 aa13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 IGLV4-3A0A075B6K6 122 aa13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 IGHV4OR15-8A0A075B7B6 117 aa13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 A0A087WW49 117 aa13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 HIGD2BQ4VC39 106 aa13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 Q6JHZ5 121 aa13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 TMEM263Q8WUH6 116 aaKnown RBP13.22□□□□□ -0.29
PCDHA13-201ENST00000289272 WFDC9Q8NEX5 89 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 A6NDX4 124 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 TRBV12-3P01733 135 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 SLURP1P55000 103 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 C20orf197Q8N268 126 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 CLPSL1A2RUU4 121 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 ODF3BA8MYP8 253 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 INSL3P51460 131 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 URB1-AS1Q96HZ7 61 aa13.21□□□□□ -0.29
PCDHA13-201ENST00000289272 IBA57-AS1B1ANH7 110 aa13.2□□□□□ -0.3
PCDHA13-201ENST00000289272 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
PCDHA13-201ENST00000289272 LINC00526Q96FQ7 95 aa13.19□□□□□ -0.3
PCDHA13-201ENST00000289272 UBE2D1P51668 147 aa13.19□□□□□ -0.3
PCDHA13-201ENST00000289272 HHLA3Q9XRX5 114 aa13.19□□□□□ -0.3
PCDHA13-201ENST00000289272 TRAV23DV6A0A075B6W5 121 aa13.18□□□□□ -0.3
PCDHA13-201ENST00000289272 UBE2D3P61077 147 aa13.18□□□□□ -0.3
PCDHA13-201ENST00000289272 UBE2D2P62837 147 aa13.18□□□□□ -0.3
PCDHA13-201ENST00000289272 SPART-AS1P0CW21 52 aa13.18□□□□□ -0.3
PCDHA13-201ENST00000289272 Q9HAA7 133 aa13.18□□□□□ -0.3
PCDHA13-201ENST00000289272 DEFB136Q30KP8 78 aa13.18□□□□□ -0.3
PCDHA13-201ENST00000289272 FAM208BQ5VWN6 2430 aa13.18□□□□□ -0.3
PCDHA13-201ENST00000289272 LMO4P61968 165 aa13.17□□□□□ -0.3
PCDHA13-201ENST00000289272 TNRC6BQ9UPQ9 1833 aaKnown RBP13.17□□□□□ -0.3
PCDHA13-201ENST00000289272 USP17L23D6RBM5 183 aa13.17□□□□□ -0.3
PCDHA13-201ENST00000289272 ETDCA0A1B0GVM5 59 aa13.17□□□□□ -0.3
PCDHA13-201ENST00000289272 EBI3Q14213 229 aa13.17□□□□□ -0.3
PCDHA13-201ENST00000289272 OTOGLQ3ZCN5 2332 aa13.16□□□□□ -0.3
PCDHA13-201ENST00000289272 COX8CQ7Z4L0 72 aa13.16□□□□□ -0.3
PCDHA13-201ENST00000289272 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
PCDHA13-201ENST00000289272 M0QY20 66 aa13.14□□□□□ -0.31
PCDHA13-201ENST00000289272 MRPL55Q7Z7F7 128 aaKnown RBP13.14□□□□□ -0.31
PCDHA13-201ENST00000289272 NDUFB1O75438 58 aa13.14□□□□□ -0.31
PCDHA13-201ENST00000289272 ZFAND3Q9H8U3 227 aa13.14□□□□□ -0.31
PCDHA13-201ENST00000289272 SPG11Q96JI7 2443 aa13.14□□□□□ -0.31
PCDHA13-201ENST00000289272 COX7BP24311 80 aa13.14□□□□□ -0.31
PCDHA13-201ENST00000289272 SMIM9A6NGZ8 99 aa13.13□□□□□ -0.31
PCDHA13-201ENST00000289272 SMIM26A0A096LP01 95 aa13.13□□□□□ -0.31
PCDHA13-201ENST00000289272 ZFAND2AQ8N6M9 145 aa13.12□□□□□ -0.31
PCDHA13-201ENST00000289272 NRGNQ92686 78 aa13.12□□□□□ -0.31
PCDHA13-201ENST00000289272 CAMK2N2Q96S95 79 aa13.12□□□□□ -0.31
PCDHA13-201ENST00000289272 GYPEP15421 78 aa13.12□□□□□ -0.31
PCDHA13-201ENST00000289272 POLR2KP53803 58 aaKnown RBP13.12□□□□□ -0.31
PCDHA13-201ENST00000289272 PIK3CD-AS1Q5SR53 167 aa13.12□□□□□ -0.31
PCDHA13-201ENST00000289272 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
PCDHA13-201ENST00000289272 ATG2AQ2TAZ0 1938 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 LY6LH3BQJ8 138 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 C20orf173Q96LM9 149 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 BPY2O14599 106 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 MUC7Q8TAX7 377 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 CDKN2A-AS1Q9UH64 79 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 ACACBO00763 2458 aa13.11□□□□□ -0.31
PCDHA13-201ENST00000289272 SMAD5-AS1Q9Y6J3 95 aa13.1□□□□□ -0.31
PCDHA13-201ENST00000289272 SERP1Q9Y6X1 66 aa13.1□□□□□ -0.31
PCDHA13-201ENST00000289272 IGF1P05019 195 aa13.1□□□□□ -0.31
PCDHA13-201ENST00000289272 PTPRQQ9UMZ3 2332 aa13.09□□□□□ -0.31
PCDHA13-201ENST00000289272 LYRM9A8MSI8 78 aa13.09□□□□□ -0.31
PCDHA13-201ENST00000289272 NCR3O14931 201 aa13.09□□□□□ -0.31
PCDHA13-201ENST00000289272 LINC00694P0DN24 101 aa13.09□□□□□ -0.31
PCDHA13-201ENST00000289272 DEFB1P60022 68 aa13.09□□□□□ -0.31
PCDHA13-201ENST00000289272 ENHOQ6UWT2 76 aa13.09□□□□□ -0.31
PCDHA13-201ENST00000289272 CLPSL2Q6UWE3 100 aa13.08□□□□□ -0.32
PCDHA13-201ENST00000289272 A0A096LPF7 62 aa13.08□□□□□ -0.32
PCDHA13-201ENST00000289272 DNAJC9-AS1A6NH13 148 aa13.08□□□□□ -0.32
PCDHA13-201ENST00000289272 CCL18P55774 89 aa13.08□□□□□ -0.32
PCDHA13-201ENST00000289272 Q6YL49 198 aa13.07□□□□□ -0.32
PCDHA13-201ENST00000289272 SPAG11BQ08648 103 aa13.07□□□□□ -0.32
PCDHA13-201ENST00000289272 KIAA1549Q9HCM3 1950 aa13.07□□□□□ -0.32
PCDHA13-201ENST00000289272 IGKV2D-24A0A075B6R9 120 aa13.06□□□□□ -0.32
PCDHA13-201ENST00000289272 LINC01548A6NM66 108 aa13.06□□□□□ -0.32
PCDHA13-201ENST00000289272 IGHV4-31P0DP07 118 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms