RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 UFSP1Q6NVU6 142 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 ZMAT4Q9H898 229 aa11.8□□□□□ -0.52
SMAD6-201ENST00000288840 KLLNB2CW77 178 aa11.79□□□□□ -0.52
SMAD6-201ENST00000288840 CIRBPQ14011 172 aaKnown RBP11.79□□□□□ -0.52
SMAD6-201ENST00000288840 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
SMAD6-201ENST00000288840 M0QY20 66 aa11.79□□□□□ -0.52
SMAD6-201ENST00000288840 GAGE7O76087 117 aa11.78□□□□□ -0.52
SMAD6-201ENST00000288840 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
SMAD6-201ENST00000288840 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
SMAD6-201ENST00000288840 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
SMAD6-201ENST00000288840 C20orf203Q8NBC4 194 aa11.78□□□□□ -0.52
SMAD6-201ENST00000288840 DEFB130BP0DP73 79 aa11.78□□□□□ -0.52
SMAD6-201ENST00000288840 DEFB130AP0DP74 79 aa11.78□□□□□ -0.52
SMAD6-201ENST00000288840 TRGV4A0A0C4DH28 118 aa11.77□□□□□ -0.52
SMAD6-201ENST00000288840 TSPAN13O95857 204 aa11.77□□□□□ -0.52
SMAD6-201ENST00000288840 CRYGDP07320 174 aa11.77□□□□□ -0.52
SMAD6-201ENST00000288840 B5MCH6 92 aa11.77□□□□□ -0.53
SMAD6-201ENST00000288840 POLR2KP53803 58 aaKnown RBP11.77□□□□□ -0.53
SMAD6-201ENST00000288840 ITPR3Q14573 2671 aa11.77□□□□□ -0.53
SMAD6-201ENST00000288840 M0R2P5 195 aa11.77□□□□□ -0.53
SMAD6-201ENST00000288840 A0A0J9YY99 117 aa11.76□□□□□ -0.53
SMAD6-201ENST00000288840 RPL13AP40429 203 aaKnown RBP11.76□□□□□ -0.53
SMAD6-201ENST00000288840 Q9UF83 564 aa11.76□□□□□ -0.53
SMAD6-201ENST00000288840 TSPEAR-AS2P59090 65 aa11.76□□□□□ -0.53
SMAD6-201ENST00000288840 CHCHD5Q9BSY4 110 aa11.76□□□□□ -0.53
SMAD6-201ENST00000288840 MED14OSP0DP75 135 aa11.75□□□□□ -0.53
SMAD6-201ENST00000288840 RPL36AP83881 106 aaKnown RBP11.75□□□□□ -0.53
SMAD6-201ENST00000288840 RPL36ALQ969Q0 106 aaKnown RBP11.75□□□□□ -0.53
SMAD6-201ENST00000288840 NOP10Q9NPE3 64 aaKnown RBP11.75□□□□□ -0.53
SMAD6-201ENST00000288840 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
SMAD6-201ENST00000288840 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
SMAD6-201ENST00000288840 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
SMAD6-201ENST00000288840 NDUFA11Q86Y39 141 aa11.74□□□□□ -0.53
SMAD6-201ENST00000288840 A0A096LPF7 62 aa11.74□□□□□ -0.53
SMAD6-201ENST00000288840 RHODO00212 210 aa11.74□□□□□ -0.53
SMAD6-201ENST00000288840 OR13C6PQ8NH95 151 aa11.74□□□□□ -0.53
SMAD6-201ENST00000288840 RHOHQ15669 191 aa11.74□□□□□ -0.53
SMAD6-201ENST00000288840 TCL1BO95988 128 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 TSHBP01222 138 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 IGHV3-30-3P0DP02 117 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 H3BMM0 161 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 PF4P02776 101 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 CFC1BP0CG36 223 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 CFC1P0CG37 223 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 Q6ZUT4 128 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 C10orf126Q8N4M7 172 aa11.73□□□□□ -0.53
SMAD6-201ENST00000288840 SPANXB1Q9NS25 103 aaPredicted RBP11.73□□□□□ -0.53
SMAD6-201ENST00000288840 IGLV4-3A0A075B6K6 122 aa11.72□□□□□ -0.53
SMAD6-201ENST00000288840 J3QLI3 93 aa11.72□□□□□ -0.53
SMAD6-201ENST00000288840 SLC25A20O43772 301 aa11.72□□□□□ -0.53
SMAD6-201ENST00000288840 HTN3P15516 51 aa11.72□□□□□ -0.53
SMAD6-201ENST00000288840 DEFB113Q30KQ7 82 aa11.72□□□□□ -0.53
SMAD6-201ENST00000288840 NTN5Q8WTR8 489 aaPredicted RBP11.72□□□□□ -0.53
SMAD6-201ENST00000288840 TMEM101Q96IK0 257 aa11.72□□□□□ -0.53
SMAD6-201ENST00000288840 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
SMAD6-201ENST00000288840 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
SMAD6-201ENST00000288840 TRBV27A0A0K0K1C4 114 aa11.71□□□□□ -0.53
SMAD6-201ENST00000288840 IGHV4-31P0DP07 118 aa11.71□□□□□ -0.53
SMAD6-201ENST00000288840 IGLV4-69A0A075B6H9 119 aa11.71□□□□□ -0.53
SMAD6-201ENST00000288840 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.53
SMAD6-201ENST00000288840 LEPROTO15243 131 aa11.71□□□□□ -0.53
SMAD6-201ENST00000288840 WFDC11Q8NEX6 87 aa11.71□□□□□ -0.53
SMAD6-201ENST00000288840 CCL24O00175 119 aa11.71□□□□□ -0.54
SMAD6-201ENST00000288840 GAGE6Q13070 117 aa11.71□□□□□ -0.54
SMAD6-201ENST00000288840 CITED2Q99967 270 aaPredicted RBP11.71□□□□□ -0.54
SMAD6-201ENST00000288840 ANAPC13Q9BS18 74 aa11.71□□□□□ -0.54
SMAD6-201ENST00000288840 WFDC10AQ9H1F0 79 aa11.71□□□□□ -0.54
SMAD6-201ENST00000288840 ZNF702PQ9H963 129 aa11.71□□□□□ -0.54
SMAD6-201ENST00000288840 MAP6D1Q9H9H5 199 aa11.71□□□□□ -0.54
SMAD6-201ENST00000288840 LGALS9O00182 355 aa11.7□□□□□ -0.54
SMAD6-201ENST00000288840 RNASE1P07998 156 aaKnown RBP11.7□□□□□ -0.54
SMAD6-201ENST00000288840 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
SMAD6-201ENST00000288840 Q9H8V8 135 aa11.7□□□□□ -0.54
SMAD6-201ENST00000288840 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
SMAD6-201ENST00000288840 SNCGO76070 127 aa11.69□□□□□ -0.54
SMAD6-201ENST00000288840 LINC00315P59091 139 aa11.69□□□□□ -0.54
SMAD6-201ENST00000288840 CLPSL2Q6UWE3 100 aa11.69□□□□□ -0.54
SMAD6-201ENST00000288840 Q6YL49 198 aa11.69□□□□□ -0.54
SMAD6-201ENST00000288840 NF1P21359 2839 aa11.69□□□□□ -0.54
SMAD6-201ENST00000288840 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
SMAD6-201ENST00000288840 KIF25-AS1Q9Y6Z4 181 aa11.69□□□□□ -0.54
SMAD6-201ENST00000288840 Q6ZSV7 163 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 Q6ZTI0 123 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 NDUFA7O95182 113 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 CRIP2P52943 208 aaPredicted RBP11.68□□□□□ -0.54
SMAD6-201ENST00000288840 LINC00158P58513 81 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 FOXI1Q12951 378 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 SLC25A29Q8N8R3 303 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 CDKN2A-AS1Q9UH64 79 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 FLNBO75369 2602 aaKnown RBP11.68□□□□□ -0.54
SMAD6-201ENST00000288840 FBN2P35556 2912 aa11.68□□□□□ -0.54
SMAD6-201ENST00000288840 ANKRD29Q8N6D5 301 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 PPDPFLQ8WWR9 84 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 USP24Q9UPU5 2620 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 TRBV20-1A0A075B6N2 111 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 PFN2P35080 140 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 ATXN8Q156A1 80 aa11.67□□□□□ -0.54
SMAD6-201ENST00000288840 CLEC2BQ92478 149 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms