RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 Q8TAT8 98 aa5.7□□□□□ -1.5
TRIM42-201ENST00000286349 CNFNQ9BYD5 112 aa5.7□□□□□ -1.5
TRIM42-201ENST00000286349 TRAV12-2A0A075B6T6 113 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 IGHV7-4-1A0A0J9YVY3 117 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 H3BS24 57 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 IGKCP01834 107 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 C12orf74Q32Q52 190 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 MRPL55Q7Z7F7 128 aaKnown RBP5.69□□□□□ -1.5
TRIM42-201ENST00000286349 RNF182Q8N6D2 247 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 FN1P02751 2386 aaKnown RBP5.69□□□□□ -1.5
TRIM42-201ENST00000286349 TRAV8-4A0A0B4J246 113 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 USP17L23D6RBM5 183 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 K7ERJ3 54 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 ERCC8Q13216 396 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 UNQ9165/PRO28630Q6UXU0 137 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 KLK15Q9H2R5 256 aa5.69□□□□□ -1.5
TRIM42-201ENST00000286349 IGHV3OR16-13A0A075B7E8 117 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 IGHV3-74A0A0B4J1X5 117 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 PRAC2D3DTV9 90 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 TRBV12-3P01733 135 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 IGHV3-11P01762 117 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 ZNF80P51504 273 aaPredicted RBP5.68□□□□□ -1.5
TRIM42-201ENST00000286349 FAM104BQ5XKR9 115 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 LINC01600Q96MT4 127 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 DSCR8Q96T75 97 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 LAMTOR3Q9UHA4 124 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 U3KQK5 164 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 TEP1Q99973 2627 aaKnown RBP5.68□□□□□ -1.5
TRIM42-201ENST00000286349 IGHV3-49A0A0A0MS15 119 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 SOCS3O14543 225 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 RHPN1-AS1Q9BWJ2 59 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 C16orf95Q9H693 158 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 HHLA3Q9XRX5 114 aa5.68□□□□□ -1.5
TRIM42-201ENST00000286349 ZNF256Q9Y2P7 627 aaPredicted RBP5.68□□□□□ -1.5
TRIM42-201ENST00000286349 NSD1Q96L73 2696 aaPredicted RBP5.68□□□□□ -1.5
TRIM42-201ENST00000286349 NIPBLQ6KC79 2804 aaeCLIP5.67□□□□□ -1.5
TRIM42-201ENST00000286349 TMSB15BA0A087X1C1 80 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 TCL1BO95988 128 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 TWIST1Q15672 202 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 Q6ZRU5 148 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 Q6ZS46 218 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 HIVEP2P31629 2446 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 HOXD3P31249 432 aaPredicted RBP5.67□□□□□ -1.5
TRIM42-201ENST00000286349 CACNG7P62955 275 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 TMEM158Q8WZ71 300 aa5.67□□□□□ -1.5
TRIM42-201ENST00000286349 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 TRAV21A0A0B4J279 112 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 LGALS9O00182 355 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 RPL11P62913 178 aaKnown RBP5.66□□□□□ -1.5
TRIM42-201ENST00000286349 GTSCR1Q86UQ5 136 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 PCP2Q8IVA1 136 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 PRSS3P2Q8NHM4 247 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 UBE2E2Q96LR5 201 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 CHAC1Q9BUX1 264 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 ESM1Q9NQ30 184 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 SERP1Q9Y6X1 66 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 ATOX1O00244 68 aa5.66□□□□□ -1.5
TRIM42-201ENST00000286349 IGHV4-4A0A075B6R2 117 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 D6R8Y8 96 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 CKS2P33552 79 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 LGALS9BQ3B8N2 356 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 LGALS9CQ6DKI2 356 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 HIST2H2BDQ6DRA6 164 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 Q8N2B8 174 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 NEXN-AS1Q8NBZ9 246 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 C11orf45Q8TAV5 145 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 DPH3P1Q9H4G8 78 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 ZNF702PQ9H963 129 aa5.65□□□□□ -1.5
TRIM42-201ENST00000286349 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.51
TRIM42-201ENST00000286349 HOXA3O43365 443 aaPredicted RBP5.65□□□□□ -1.51
TRIM42-201ENST00000286349 MED14OSP0DP75 135 aa5.65□□□□□ -1.51
TRIM42-201ENST00000286349 PRB4P10163 310 aaPredicted RBP5.65□□□□□ -1.51
TRIM42-201ENST00000286349 MRPL51Q4U2R6 128 aaKnown RBP5.65□□□□□ -1.51
TRIM42-201ENST00000286349 OR8A1Q8NGG7 326 aa5.65□□□□□ -1.51
TRIM42-201ENST00000286349 ZNF747Q9BV97 191 aa5.65□□□□□ -1.51
TRIM42-201ENST00000286349 TIMM8BQ9Y5J9 83 aaPredicted RBP5.65□□□□□ -1.51
TRIM42-201ENST00000286349 LINC01619G3V211 115 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 NPC2P61916 151 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 SERTAD4-AS1Q5TG53 156 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 CXCL5P42830 114 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 UBE2D3P61077 147 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 SNRPD3P62318 126 aaKnown RBP5.64□□□□□ -1.51
TRIM42-201ENST00000286349 UBE2D2P62837 147 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
TRIM42-201ENST00000286349 H3BT86 120 aa5.63□□□□□ -1.51
TRIM42-201ENST00000286349 PSMB2P49721 201 aa5.63□□□□□ -1.51
TRIM42-201ENST00000286349 ZFAND2AQ8N6M9 145 aa5.63□□□□□ -1.51
TRIM42-201ENST00000286349 NXT2Q9NPJ8 142 aaKnown RBP5.63□□□□□ -1.51
TRIM42-201ENST00000286349 SPANXN1Q5VSR9 72 aa5.63□□□□□ -1.51
TRIM42-201ENST00000286349 DCANP1Q8TF63 244 aa5.63□□□□□ -1.51
TRIM42-201ENST00000286349 COPS9Q8WXC6 57 aa5.63□□□□□ -1.51
TRIM42-201ENST00000286349 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
TRIM42-201ENST00000286349 DNAJC9-AS1A6NH13 148 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms