RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 LINC00518Q8N0U6 118 aa9.37□□□□□ -0.91
ACER3-201ENST00000278544 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
ACER3-201ENST00000278544 MAP1LC3CQ9BXW4 147 aa9.36□□□□□ -0.91
ACER3-201ENST00000278544 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
ACER3-201ENST00000278544 PRKDCP78527 4128 aaKnown RBP9.36□□□□□ -0.91
ACER3-201ENST00000278544 COTL1Q14019 142 aa9.36□□□□□ -0.91
ACER3-201ENST00000278544 SYS1-DBNDD2H3BUS1 97 aa9.35□□□□□ -0.91
ACER3-201ENST00000278544 ATP5G1P05496 136 aa9.35□□□□□ -0.91
ACER3-201ENST00000278544 PPP1R17O96001 155 aa9.35□□□□□ -0.91
ACER3-201ENST00000278544 HSPB8Q9UJY1 196 aa9.35□□□□□ -0.91
ACER3-201ENST00000278544 TRBV27A0A0K0K1C4 114 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 PRSS29PA6NIE9 313 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 LYRM9A8MSI8 78 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 JOSD1Q15040 202 aaPredicted RBP9.34□□□□□ -0.91
ACER3-201ENST00000278544 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 ORMDL2Q53FV1 153 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 C11orf45Q8TAV5 145 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
ACER3-201ENST00000278544 GAGE6Q13070 117 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 RHOHQ15669 191 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 Q6ZN92 141 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 NTM-AS1Q6ZSK4 140 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 Q8N3U1 123 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
ACER3-201ENST00000278544 CRYBA4P53673 196 aa9.33□□□□□ -0.92
ACER3-201ENST00000278544 VSIG2Q96IQ7 327 aa9.33□□□□□ -0.92
ACER3-201ENST00000278544 FBN3Q75N90 2809 aa9.33□□□□□ -0.92
ACER3-201ENST00000278544 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
ACER3-201ENST00000278544 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
ACER3-201ENST00000278544 PRO0255Q9UI72 69 aa9.33□□□□□ -0.92
ACER3-201ENST00000278544 CLPSL2Q6UWE3 100 aa9.32□□□□□ -0.92
ACER3-201ENST00000278544 CHCHD5Q9BSY4 110 aa9.32□□□□□ -0.92
ACER3-201ENST00000278544 TRBV6-5A0A0K0K1A5 114 aa9.32□□□□□ -0.92
ACER3-201ENST00000278544 STPG4Q8N801 248 aa9.32□□□□□ -0.92
ACER3-201ENST00000278544 ZMAT4Q9H898 229 aa9.32□□□□□ -0.92
ACER3-201ENST00000278544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.32□□□□□ -0.92
ACER3-201ENST00000278544 Q8N976 141 aa9.32□□□□□ -0.92
ACER3-201ENST00000278544 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
ACER3-201ENST00000278544 NDUFAF3Q9BU61 184 aa9.31□□□□□ -0.92
ACER3-201ENST00000278544 A8MZ25 164 aa9.31□□□□□ -0.92
ACER3-201ENST00000278544 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
ACER3-201ENST00000278544 UBE2D3P61077 147 aa9.31□□□□□ -0.92
ACER3-201ENST00000278544 UBE2D2P62837 147 aa9.31□□□□□ -0.92
ACER3-201ENST00000278544 PIK3CD-AS1Q5SR53 167 aa9.31□□□□□ -0.92
ACER3-201ENST00000278544 PTH2Q96A98 100 aa9.3□□□□□ -0.92
ACER3-201ENST00000278544 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
ACER3-201ENST00000278544 C20orf203Q8NBC4 194 aa9.3□□□□□ -0.92
ACER3-201ENST00000278544 ATP6V0E2Q8NHE4 81 aa9.3□□□□□ -0.92
ACER3-201ENST00000278544 DEFB131BA0A096LNP1 70 aa9.3□□□□□ -0.92
ACER3-201ENST00000278544 SMIM6P0DI80 62 aa9.3□□□□□ -0.92
ACER3-201ENST00000278544 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
ACER3-201ENST00000278544 TOMM6Q96B49 74 aa9.29□□□□□ -0.92
ACER3-201ENST00000278544 C14orf144Q96I85 54 aa9.29□□□□□ -0.92
ACER3-201ENST00000278544 CHCHD7Q9BUK0 85 aa9.29□□□□□ -0.92
ACER3-201ENST00000278544 KPRPQ5T749 579 aaPredicted RBP9.29□□□□□ -0.92
ACER3-201ENST00000278544 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
ACER3-201ENST00000278544 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
ACER3-201ENST00000278544 S100A12P80511 92 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 AMMECR1LQ6DCA0 310 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 TM2D3Q9BRN9 247 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 UBE2L6O14933 153 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 Q6ZUT4 128 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 BAALCQ8WXS3 180 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 VAMP8Q9BV40 100 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 PRSS47A8MTI9 375 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
ACER3-201ENST00000278544 TRAV13-1A0A0B4J241 112 aa9.27□□□□□ -0.92
ACER3-201ENST00000278544 ZNF664Q8N3J9 261 aa9.27□□□□□ -0.92
ACER3-201ENST00000278544 TRBV10-1A0A0K0K1A3 114 aa9.27□□□□□ -0.93
ACER3-201ENST00000278544 ERASQ7Z444 233 aa9.27□□□□□ -0.93
ACER3-201ENST00000278544 LYSTQ99698 3801 aa9.27□□□□□ -0.93
ACER3-201ENST00000278544 IGLL5B9A064 214 aa9.27□□□□□ -0.93
ACER3-201ENST00000278544 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
ACER3-201ENST00000278544 ATP5LO75964 103 aa9.26□□□□□ -0.93
ACER3-201ENST00000278544 FGF6P10767 208 aa9.26□□□□□ -0.93
ACER3-201ENST00000278544 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
ACER3-201ENST00000278544 C20orf202A1L168 122 aa9.26□□□□□ -0.93
ACER3-201ENST00000278544 SPATA45Q537H7 98 aa9.26□□□□□ -0.93
ACER3-201ENST00000278544 ODF1Q14990 250 aa9.25□□□□□ -0.93
ACER3-201ENST00000278544 VCX2Q9H322 139 aa9.25□□□□□ -0.93
ACER3-201ENST00000278544 TRBV25-1A0A075B6N4 114 aa9.25□□□□□ -0.93
ACER3-201ENST00000278544 IGIPA6NJ69 53 aa9.25□□□□□ -0.93
ACER3-201ENST00000278544 DAZ4Q86SG3 579 aaKnown RBP9.25□□□□□ -0.93
ACER3-201ENST00000278544 TMEM243Q9BU79 118 aa9.25□□□□□ -0.93
ACER3-201ENST00000278544 DAZ3Q9NR90 486 aaKnown RBP9.25□□□□□ -0.93
ACER3-201ENST00000278544 CHTOPQ9Y3Y2 248 aaKnown RBP9.25□□□□□ -0.93
ACER3-201ENST00000278544 IGLV4-60A0A075B6I1 120 aa9.24□□□□□ -0.93
ACER3-201ENST00000278544 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
ACER3-201ENST00000278544 TRBV6-8A0A0A6YYG3 113 aa9.24□□□□□ -0.93
ACER3-201ENST00000278544 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
ACER3-201ENST00000278544 NMUP48645 174 aa9.24□□□□□ -0.93
ACER3-201ENST00000278544 PET117Q6UWS5 81 aa9.24□□□□□ -0.93
ACER3-201ENST00000278544 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
ACER3-201ENST00000278544 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
ACER3-201ENST00000278544 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
ACER3-201ENST00000278544 UBE2D4Q9Y2X8 147 aa9.23□□□□□ -0.93
ACER3-201ENST00000278544 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
ACER3-201ENST00000278544 LINC01545Q5VT33 79 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms