RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 RPL13AP40429 203 aaKnown RBP13.68□□□□□ -0.22
SSC4D-201ENST00000275560 GAGE12JA6NER3 117 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 GAGE7O76087 117 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 GAGE12FP0CL80 117 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 GAGE12GP0CL81 117 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 GAGE12IP0CL82 117 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 RBMY1A1P0DJD3 496 aaKnown RBP13.68□□□□□ -0.22
SSC4D-201ENST00000275560 RBMY1CP0DJD4 496 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 GAGE4Q13068 117 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 RBMY1FQ15415 496 aaKnown RBP13.68□□□□□ -0.22
SSC4D-201ENST00000275560 C3orf56Q8N813 242 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.68□□□□□ -0.22
SSC4D-201ENST00000275560 IGKV2-29A2NJV5 120 aaPredicted RBP13.68□□□□□ -0.22
SSC4D-201ENST00000275560 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
SSC4D-201ENST00000275560 UTP20O75691 2785 aaKnown RBP13.67□□□□□ -0.22
SSC4D-201ENST00000275560 SPTBN4Q9H254 2564 aa13.67□□□□□ -0.22
SSC4D-201ENST00000275560 A6NDX4 124 aa13.67□□□□□ -0.22
SSC4D-201ENST00000275560 C19orf84I3L1E1 186 aa13.67□□□□□ -0.22
SSC4D-201ENST00000275560 A0A0U1RRA0 63 aa13.66□□□□□ -0.22
SSC4D-201ENST00000275560 IGHV3-38A0A0C4DH36 116 aa13.66□□□□□ -0.22
SSC4D-201ENST00000275560 IGHV1-58A0A0C4DH39 117 aa13.66□□□□□ -0.22
SSC4D-201ENST00000275560 MRPS36P82909 103 aaKnown RBP13.66□□□□□ -0.22
SSC4D-201ENST00000275560 Q6ZSN1 163 aa13.66□□□□□ -0.22
SSC4D-201ENST00000275560 KLRB1Q12918 225 aa13.64□□□□□ -0.23
SSC4D-201ENST00000275560 MIAQ16674 131 aa13.64□□□□□ -0.23
SSC4D-201ENST00000275560 H3BUA1 57 aa13.64□□□□□ -0.23
SSC4D-201ENST00000275560 ITPR1Q14643 2758 aa13.64□□□□□ -0.23
SSC4D-201ENST00000275560 SNRPD3P62318 126 aaKnown RBP13.63□□□□□ -0.23
SSC4D-201ENST00000275560 VSIG2Q96IQ7 327 aa13.63□□□□□ -0.23
SSC4D-201ENST00000275560 SYNJ2BPP57105 145 aa13.63□□□□□ -0.23
SSC4D-201ENST00000275560 ZNF625Q96I27 306 aaPredicted RBP13.63□□□□□ -0.23
SSC4D-201ENST00000275560 BRI3O95415 125 aa13.63□□□□□ -0.23
SSC4D-201ENST00000275560 CHCHD5Q9BSY4 110 aa13.63□□□□□ -0.23
SSC4D-201ENST00000275560 TMEM61Q8N0U2 210 aa13.62□□□□□ -0.23
SSC4D-201ENST00000275560 K7EMT4 169 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 K7EQG2 157 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 SMIM20Q8N5G0 67 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 SPANXDQ9BXN6 97 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 SPANXCQ9NY87 97 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 TNFRSF18Q9Y5U5 241 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 C2CD3Q4AC94 2353 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 COX6CP09669 75 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 CFHR3Q02985 330 aa13.61□□□□□ -0.23
SSC4D-201ENST00000275560 LST1O00453 97 aa13.6□□□□□ -0.23
SSC4D-201ENST00000275560 AVPP01185 164 aa13.6□□□□□ -0.23
SSC4D-201ENST00000275560 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.6□□□□□ -0.23
SSC4D-201ENST00000275560 LINC00467Q9BRT7 94 aa13.6□□□□□ -0.23
SSC4D-201ENST00000275560 NOTCH3Q9UM47 2321 aa13.6□□□□□ -0.23
SSC4D-201ENST00000275560 CDKN2A-AS1Q9UH64 79 aa13.6□□□□□ -0.23
SSC4D-201ENST00000275560 MXRA5Q9NR99 2828 aa13.59□□□□□ -0.23
SSC4D-201ENST00000275560 TRGV11A0A075B6L2 103 aa13.59□□□□□ -0.23
SSC4D-201ENST00000275560 CHCHD7Q9BUK0 85 aa13.59□□□□□ -0.23
SSC4D-201ENST00000275560 PYGO1Q9Y3Y4 419 aa13.59□□□□□ -0.23
SSC4D-201ENST00000275560 USP9YO00507 2555 aaPredicted RBP13.59□□□□□ -0.23
SSC4D-201ENST00000275560 Q6Q795 121 aa13.59□□□□□ -0.23
SSC4D-201ENST00000275560 LINC01600Q96MT4 127 aa13.59□□□□□ -0.23
SSC4D-201ENST00000275560 UBE2D4Q9Y2X8 147 aa13.59□□□□□ -0.23
SSC4D-201ENST00000275560 H3BT86 120 aa13.58□□□□□ -0.24
SSC4D-201ENST00000275560 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
SSC4D-201ENST00000275560 AKAP9Q99996 3911 aa13.57□□□□□ -0.24
SSC4D-201ENST00000275560 PSMB8P28062 276 aa13.57□□□□□ -0.24
SSC4D-201ENST00000275560 LY6DQ14210 128 aa13.57□□□□□ -0.24
SSC4D-201ENST00000275560 MEIG1Q5JSS6 88 aa13.57□□□□□ -0.24
SSC4D-201ENST00000275560 TINCRA0A1B0GVN0 87 aa13.56□□□□□ -0.24
SSC4D-201ENST00000275560 FLNCQ14315 2725 aa13.56□□□□□ -0.24
SSC4D-201ENST00000275560 IGHV4-59P01825 116 aa13.56□□□□□ -0.24
SSC4D-201ENST00000275560 COX6A2Q02221 97 aa13.56□□□□□ -0.24
SSC4D-201ENST00000275560 CENPEQ02224 2701 aa13.55□□□□□ -0.24
SSC4D-201ENST00000275560 IGHV4-30-2A0A087WSY4 118 aa13.54□□□□□ -0.24
SSC4D-201ENST00000275560 NDUFA7O95182 113 aa13.54□□□□□ -0.24
SSC4D-201ENST00000275560 HERV-K104P63124 156 aa13.54□□□□□ -0.24
SSC4D-201ENST00000275560 Q8N2B8 174 aa13.54□□□□□ -0.24
SSC4D-201ENST00000275560 TMEM101Q96IK0 257 aa13.54□□□□□ -0.24
SSC4D-201ENST00000275560 NBL1P41271 181 aa13.54□□□□□ -0.24
SSC4D-201ENST00000275560 POLQO75417 2590 aa13.53□□□□□ -0.24
SSC4D-201ENST00000275560 HIST2H2BDQ6DRA6 164 aa13.53□□□□□ -0.24
SSC4D-201ENST00000275560 SHISA2Q6UWI4 295 aa13.53□□□□□ -0.24
SSC4D-201ENST00000275560 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
SSC4D-201ENST00000275560 RBMY1BA6NDE4 496 aaKnown RBP13.52□□□□□ -0.24
SSC4D-201ENST00000275560 RBMY1EA6NEQ0 496 aaKnown RBP13.52□□□□□ -0.24
SSC4D-201ENST00000275560 RBMY1DP0C7P1 496 aaKnown RBP13.52□□□□□ -0.24
SSC4D-201ENST00000275560 DEFB131AP59861 70 aa13.52□□□□□ -0.24
SSC4D-201ENST00000275560 Q9H8V8 135 aa13.52□□□□□ -0.25
SSC4D-201ENST00000275560 DEFB136Q30KP8 78 aa13.51□□□□□ -0.25
SSC4D-201ENST00000275560 SMCR5Q8TEV8 140 aa13.51□□□□□ -0.25
SSC4D-201ENST00000275560 SOSTDC1Q6X4U4 206 aa13.5□□□□□ -0.25
SSC4D-201ENST00000275560 MYO9AB2RTY4 2548 aa13.5□□□□□ -0.25
SSC4D-201ENST00000275560 LINC00308Q8TCZ7 52 aa13.5□□□□□ -0.25
SSC4D-201ENST00000275560 YAE1D1Q9NRH1 226 aa13.5□□□□□ -0.25
SSC4D-201ENST00000275560 FAM236AA0A1B0GUQ0 79 aa13.49□□□□□ -0.25
SSC4D-201ENST00000275560 FAM236BA0A1B0GV22 79 aa13.49□□□□□ -0.25
SSC4D-201ENST00000275560 SPANXA1Q9NS26 97 aa13.49□□□□□ -0.25
SSC4D-201ENST00000275560 HOXD3P31249 432 aaPredicted RBP13.49□□□□□ -0.25
SSC4D-201ENST00000275560 C10orf105Q8TEF2 133 aa13.49□□□□□ -0.25
SSC4D-201ENST00000275560 DEFB121Q5J5C9 76 aa13.49□□□□□ -0.25
SSC4D-201ENST00000275560 C18orf65Q6ZTR6 163 aa13.49□□□□□ -0.25
SSC4D-201ENST00000275560 MSMBP08118 114 aa13.48□□□□□ -0.25
SSC4D-201ENST00000275560 DEFB112Q30KQ8 113 aa13.48□□□□□ -0.25
SSC4D-201ENST00000275560 NDUFA1O15239 70 aa13.48□□□□□ -0.25
SSC4D-201ENST00000275560 FBN2P35556 2912 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms