RNA–Protein interactions for RNA: ENST00000273590.3

TCTA-201, Transcript of T cell leukemia translocation altered, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCTA, Length 2,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTA-201ENST00000273590 LINC00482Q8N8I6 264 aa13.72□□□□□ -0.21
TCTA-201ENST00000273590 PHLDA1Q8WV24 401 aaPredicted RBP13.72□□□□□ -0.21
TCTA-201ENST00000273590 JMJD1CQ15652 2540 aa13.71□□□□□ -0.21
TCTA-201ENST00000273590 PF4P02776 101 aa13.71□□□□□ -0.21
TCTA-201ENST00000273590 PTTG1IPP53801 180 aa13.71□□□□□ -0.21
TCTA-201ENST00000273590 SPATA3Q8NHX4 192 aa13.71□□□□□ -0.21
TCTA-201ENST00000273590 TMEM263Q8WUH6 116 aaKnown RBP13.71□□□□□ -0.21
TCTA-201ENST00000273590 ZNF479Q96JC4 524 aa13.71□□□□□ -0.21
TCTA-201ENST00000273590 OR4C5Q8NGB2 326 aa13.7□□□□□ -0.22
TCTA-201ENST00000273590 CHCHD7Q9BUK0 85 aa13.7□□□□□ -0.22
TCTA-201ENST00000273590 H3BRM9 83 aa13.7□□□□□ -0.22
TCTA-201ENST00000273590 PAPPA-AS1Q5QFB9 102 aa13.7□□□□□ -0.22
TCTA-201ENST00000273590 AMMECR1LQ6DCA0 310 aa13.7□□□□□ -0.22
TCTA-201ENST00000273590 NAA38Q9BRA0 125 aaKnown RBP13.7□□□□□ -0.22
TCTA-201ENST00000273590 TMEM170BQ5T4T1 132 aa13.69□□□□□ -0.22
TCTA-201ENST00000273590 CEND1Q8N111 149 aa13.69□□□□□ -0.22
TCTA-201ENST00000273590 CSNK1G2-AS1Q8NCQ2 148 aa13.69□□□□□ -0.22
TCTA-201ENST00000273590 RAB37Q96AX2 223 aa13.69□□□□□ -0.22
TCTA-201ENST00000273590 NOP10Q9NPE3 64 aaKnown RBP13.69□□□□□ -0.22
TCTA-201ENST00000273590 PLAC8L1A1L4L8 177 aa13.69□□□□□ -0.22
TCTA-201ENST00000273590 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
TCTA-201ENST00000273590 PLEKHB2Q96CS7 222 aa13.68□□□□□ -0.22
TCTA-201ENST00000273590 DNAJC30Q96LL9 226 aa13.68□□□□□ -0.22
TCTA-201ENST00000273590 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.67□□□□□ -0.22
TCTA-201ENST00000273590 IGKV2-29A2NJV5 120 aaPredicted RBP13.67□□□□□ -0.22
TCTA-201ENST00000273590 ZNF815PA8K554 130 aa13.67□□□□□ -0.22
TCTA-201ENST00000273590 TSPEAR-AS2P59090 65 aa13.67□□□□□ -0.22
TCTA-201ENST00000273590 TM2D2Q9BX73 214 aa13.67□□□□□ -0.22
TCTA-201ENST00000273590 A0A0J9YXV3 536 aa13.67□□□□□ -0.22
TCTA-201ENST00000273590 RNASE13Q5GAN3 156 aaKnown RBP13.67□□□□□ -0.22
TCTA-201ENST00000273590 VCX2Q9H322 139 aa13.67□□□□□ -0.22
TCTA-201ENST00000273590 PYGO1Q9Y3Y4 419 aa13.67□□□□□ -0.22
TCTA-201ENST00000273590 C9orf118A6NHY6 69 aa13.66□□□□□ -0.22
TCTA-201ENST00000273590 K7ERJ3 54 aa13.66□□□□□ -0.22
TCTA-201ENST00000273590 TRBV7-3A0A075B6L6 115 aa13.66□□□□□ -0.22
TCTA-201ENST00000273590 HERVK_113P61574 105 aa13.66□□□□□ -0.22
TCTA-201ENST00000273590 AMELXQ99217 191 aa13.65□□□□□ -0.22
TCTA-201ENST00000273590 HIST1H4GQ99525 98 aa13.65□□□□□ -0.22
TCTA-201ENST00000273590 FN1P02751 2386 aaKnown RBP13.65□□□□□ -0.22
TCTA-201ENST00000273590 H3BUT2 72 aa13.64□□□□□ -0.23
TCTA-201ENST00000273590 FOSL1P15407 271 aa13.64□□□□□ -0.23
TCTA-201ENST00000273590 DAZ2Q13117 558 aaKnown RBP13.64□□□□□ -0.23
TCTA-201ENST00000273590 TRAV4A0A0B4J268 109 aa13.64□□□□□ -0.23
TCTA-201ENST00000273590 ZNF22P17026 224 aaPredicted RBP13.64□□□□□ -0.23
TCTA-201ENST00000273590 TAL2Q16559 108 aa13.64□□□□□ -0.23
TCTA-201ENST00000273590 UBE2D4Q9Y2X8 147 aa13.64□□□□□ -0.23
TCTA-201ENST00000273590 SMIM13P0DJ93 91 aa13.63□□□□□ -0.23
TCTA-201ENST00000273590 COTL1Q14019 142 aa13.63□□□□□ -0.23
TCTA-201ENST00000273590 C16orf74Q96GX8 76 aa13.63□□□□□ -0.23
TCTA-201ENST00000273590 NSD1Q96L73 2696 aaPredicted RBP13.63□□□□□ -0.23
TCTA-201ENST00000273590 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
TCTA-201ENST00000273590 NHP2Q9NX24 153 aaKnown RBP13.63□□□□□ -0.23
TCTA-201ENST00000273590 FLNBO75369 2602 aaKnown RBP13.62□□□□□ -0.23
TCTA-201ENST00000273590 C2CD3Q4AC94 2353 aa13.62□□□□□ -0.23
TCTA-201ENST00000273590 TMEM223A0PJW6 202 aa13.62□□□□□ -0.23
TCTA-201ENST00000273590 GAGE12BA1L429 117 aa13.62□□□□□ -0.23
TCTA-201ENST00000273590 GAGE7O76087 117 aa13.62□□□□□ -0.23
TCTA-201ENST00000273590 GAGE12FP0CL80 117 aa13.62□□□□□ -0.23
TCTA-201ENST00000273590 GAGE12GP0CL81 117 aa13.62□□□□□ -0.23
TCTA-201ENST00000273590 GAGE12IP0CL82 117 aa13.62□□□□□ -0.23
TCTA-201ENST00000273590 K7EQD1 137 aa13.61□□□□□ -0.23
TCTA-201ENST00000273590 SLC25A29Q8N8R3 303 aa13.61□□□□□ -0.23
TCTA-201ENST00000273590 HIVEP1P15822 2718 aa13.61□□□□□ -0.23
TCTA-201ENST00000273590 RRN3P1Q2M238 152 aa13.61□□□□□ -0.23
TCTA-201ENST00000273590 IGHV3-64A0A075B6Q5 118 aa13.6□□□□□ -0.23
TCTA-201ENST00000273590 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
TCTA-201ENST00000273590 Q6ZUT4 128 aa13.6□□□□□ -0.23
TCTA-201ENST00000273590 NOTCH3Q9UM47 2321 aa13.6□□□□□ -0.23
TCTA-201ENST00000273590 SPANXA1Q9NS26 97 aa13.6□□□□□ -0.23
TCTA-201ENST00000273590 J3QQQ9 107 aa13.59□□□□□ -0.23
TCTA-201ENST00000273590 CRLF1O75462 422 aa13.59□□□□□ -0.23
TCTA-201ENST00000273590 OVOL2Q9BRP0 275 aa13.59□□□□□ -0.23
TCTA-201ENST00000273590 GAGE12JA6NER3 117 aa13.58□□□□□ -0.23
TCTA-201ENST00000273590 GAGE4Q13068 117 aa13.58□□□□□ -0.23
TCTA-201ENST00000273590 GAGE5Q13069 117 aa13.58□□□□□ -0.23
TCTA-201ENST00000273590 GAGE13Q4V321 117 aa13.58□□□□□ -0.23
TCTA-201ENST00000273590 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.58□□□□□ -0.23
TCTA-201ENST00000273590 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
TCTA-201ENST00000273590 A0A0J9YY99 117 aa13.58□□□□□ -0.24
TCTA-201ENST00000273590 MRPS36P82909 103 aaKnown RBP13.58□□□□□ -0.24
TCTA-201ENST00000273590 VWFP04275 2813 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 LEPROTO15243 131 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 CRYBA4P53673 196 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 RPL36AP83881 106 aaKnown RBP13.57□□□□□ -0.24
TCTA-201ENST00000273590 C12orf74Q32Q52 190 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 NTM-AS1Q6ZSK4 140 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 RPL36ALQ969Q0 106 aaKnown RBP13.57□□□□□ -0.24
TCTA-201ENST00000273590 TRBV10-1A0A0K0K1A3 114 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 LOC100131303A0A0U1RQF7 123 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 UBE2D3P61077 147 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 UBE2D2P62837 147 aa13.57□□□□□ -0.24
TCTA-201ENST00000273590 A0A1W2PPM0 123 aa13.56□□□□□ -0.24
TCTA-201ENST00000273590 LGALS3P17931 250 aaKnown RBP13.56□□□□□ -0.24
TCTA-201ENST00000273590 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
TCTA-201ENST00000273590 GAGE10A6NGK3 116 aa13.55□□□□□ -0.24
TCTA-201ENST00000273590 SAMD5Q5TGI4 173 aa13.55□□□□□ -0.24
TCTA-201ENST00000273590 OR5A1Q8NGJ0 315 aa13.55□□□□□ -0.24
TCTA-201ENST00000273590 C9orf66Q5T8R8 295 aa13.54□□□□□ -0.24
TCTA-201ENST00000273590 TENM1Q9UKZ4 2725 aa13.54□□□□□ -0.24
TCTA-201ENST00000273590 SRSF9Q13242 221 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms