RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 UQCRQO14949 82 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 MYCNOSP40205 109 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 NFE4Q86UQ8 179 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 APRG1Q8IVJ8 170 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 ZNF524Q96C55 264 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 NUPR1O60356 82 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 IGHV3-30P01768 117 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 IGHV3-30-3P0DP02 117 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 IGHV3-30-5P0DP03 117 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 DEFB113Q30KQ7 82 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 C20orf203Q8NBC4 194 aa6.12□□□□□ -1.43
LIMD1-201ENST00000273317 NDUFC1O43677 76 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 INSL3P51460 131 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 TCL1BO95988 128 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 TDRG1Q3Y452 100 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 PRR4Q16378 134 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 MSRB1Q9NZV6 116 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
LIMD1-201ENST00000273317 ANKRD11Q6UB99 2663 aaPredicted RBP6.11□□□□□ -1.43
LIMD1-201ENST00000273317 SEM1Q6ZVN7 128 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 RITA1Q96K30 269 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 P0DMU3 169 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 FAM231AP0DMU4 169 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 FAM231CP0DMU5 169 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 IGHV4-30-4P0DP06 118 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 IGHV4-31P0DP07 118 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 IGHV4-38-2P0DP08 117 aa6.11□□□□□ -1.43
LIMD1-201ENST00000273317 FAM236DA0A1B0GTK5 79 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 FAM236CP0DP71 79 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 SCXQ7RTU7 201 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 TRAV23DV6A0A075B6W5 121 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 HIST2H2BDQ6DRA6 164 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 Q8N9W7 124 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 C11orf1Q9H5F2 150 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 BPY2O14599 106 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 C10orf105Q8TEF2 133 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 LINC00574Q9H8X3 128 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 FN1P02751 2386 aaKnown RBP6.1□□□□□ -1.43
LIMD1-201ENST00000273317 P0C879 139 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 C3orf22Q8N5N4 141 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 SPANXB1Q9NS25 103 aaPredicted RBP6.1□□□□□ -1.43
LIMD1-201ENST00000273317 A0A0J9YX75 114 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 MIR7-3HGQ8N6C7 128 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 FAM110AQ9BQ89 295 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 IGLV2-14P01704 120 aa6.1□□□□□ -1.43
LIMD1-201ENST00000273317 DAZAP2Q15038 168 aaPredicted RBP6.1□□□□□ -1.43
LIMD1-201ENST00000273317 K7ERS5 55 aa6.09□□□□□ -1.43
LIMD1-201ENST00000273317 NDUFC2-KCTD14E9PQ53 114 aa6.09□□□□□ -1.43
LIMD1-201ENST00000273317 H0Y9J4 135 aa6.09□□□□□ -1.43
LIMD1-201ENST00000273317 PLA2G2EQ9NZK7 142 aa6.09□□□□□ -1.43
LIMD1-201ENST00000273317 USP9XQ93008 2570 aaPredicted RBP6.09□□□□□ -1.44
LIMD1-201ENST00000273317 PRAC2D3DTV9 90 aa6.09□□□□□ -1.44
LIMD1-201ENST00000273317 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
LIMD1-201ENST00000273317 U3KQK5 164 aa6.08□□□□□ -1.44
LIMD1-201ENST00000273317 ZFAND2AQ8N6M9 145 aa6.08□□□□□ -1.44
LIMD1-201ENST00000273317 IGHV4-61A0A0C4DH41 118 aa6.08□□□□□ -1.44
LIMD1-201ENST00000273317 SMIM9A6NGZ8 99 aa6.08□□□□□ -1.44
LIMD1-201ENST00000273317 PTH2Q96A98 100 aa6.08□□□□□ -1.44
LIMD1-201ENST00000273317 NEXN-AS1Q8NBZ9 246 aa6.08□□□□□ -1.44
LIMD1-201ENST00000273317 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 IBA57-AS1B1ANH7 110 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 ODF3L1Q8IXM7 274 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 PRO0255Q9UI72 69 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 TIMM17BO60830 172 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 TEX49A0A1B0GTD5 131 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 LYRM9A8MSI8 78 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 IGLV1-47P01700 117 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 SPRY4Q9C004 299 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 SPRNQ5BIV9 151 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 IMUPQ9GZP8 106 aa6.07□□□□□ -1.44
LIMD1-201ENST00000273317 ODF3BA8MYP8 253 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 USP17L23D6RBM5 183 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 FSTL3O95633 263 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 SDIM1Q6ZPB5 146 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 ANKRD17O75179 2603 aaKnown RBP6.06□□□□□ -1.44
LIMD1-201ENST00000273317 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 TP73-AS1Q9UF72 201 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 IGLC6P0CF74 106 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 FANCD2OSQ96PS1 177 aa6.06□□□□□ -1.44
LIMD1-201ENST00000273317 DEFB135Q30KP9 77 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 FAM222AQ5U5X8 452 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 TRBV30A0A0K0K1B3 111 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 BLCAPP62952 87 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 CASC2Q6XLA1 102 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 SIRPDQ9H106 197 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 IGKV1D-37A0A075B6S9 117 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 CCDC140Q96MF4 163 aa6.05□□□□□ -1.44
LIMD1-201ENST00000273317 IGKV2D-26A0A0A0MRZ7 120 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 NDUFA7O95182 113 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 MAP6D1Q9H9H5 199 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 COL4A3Q01955 1670 aa6.04□□□□□ -1.44
LIMD1-201ENST00000273317 GRNP28799 593 aaKnown RBP6.04□□□□□ -1.44
LIMD1-201ENST00000273317 A6NDX4 124 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms