RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TRAPPC1Q9Y5R8 145 aa9.72□□□□□ -0.85
SSBP1-201ENST00000265304 IGHV3-38A0A0C4DH36 116 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 H7C423 109 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 K7EMI3 77 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 TCAPO15273 167 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 SIVA1O15304 175 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 LY6G6CO95867 125 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 BTF3P20290 206 aaKnown RBP9.71□□□□□ -0.86
SSBP1-201ENST00000265304 COTL1Q14019 142 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 NIT1Q86X76 327 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
SSBP1-201ENST00000265304 TRBV25-1A0A075B6N4 114 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 SCO1O75880 301 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 PMCHP20382 165 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 FABP9Q0Z7S8 132 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 KIAA1644Q3SXP7 199 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
SSBP1-201ENST00000265304 A0A1B0GUV1 79 aa9.69□□□□□ -0.86
SSBP1-201ENST00000265304 RAB5AP20339 215 aa9.69□□□□□ -0.86
SSBP1-201ENST00000265304 PKIAP61925 76 aa9.69□□□□□ -0.86
SSBP1-201ENST00000265304 Q8N8P6 123 aa9.69□□□□□ -0.86
SSBP1-201ENST00000265304 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
SSBP1-201ENST00000265304 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
SSBP1-201ENST00000265304 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
SSBP1-201ENST00000265304 NBDYA0A0U1RRE5 68 aa9.67□□□□□ -0.86
SSBP1-201ENST00000265304 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
SSBP1-201ENST00000265304 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
SSBP1-201ENST00000265304 RYR2Q92736 4967 aa9.66□□□□□ -0.86
SSBP1-201ENST00000265304 AMTP48728 403 aa9.66□□□□□ -0.86
SSBP1-201ENST00000265304 TTC32Q5I0X7 151 aa9.66□□□□□ -0.86
SSBP1-201ENST00000265304 MRPL52Q86TS9 123 aaKnown RBP9.66□□□□□ -0.86
SSBP1-201ENST00000265304 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
SSBP1-201ENST00000265304 TRAV9-2A0A087WT02 112 aa9.65□□□□□ -0.86
SSBP1-201ENST00000265304 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
SSBP1-201ENST00000265304 C20orf203Q8NBC4 194 aa9.65□□□□□ -0.86
SSBP1-201ENST00000265304 C18orf32Q8TCD1 76 aa9.65□□□□□ -0.86
SSBP1-201ENST00000265304 TIMM21Q9BVV7 248 aa9.65□□□□□ -0.86
SSBP1-201ENST00000265304 CSDC2Q9Y534 153 aaKnown RBP9.65□□□□□ -0.86
SSBP1-201ENST00000265304 DNAH2Q9P225 4427 aa9.64□□□□□ -0.87
SSBP1-201ENST00000265304 IBA57-AS1B1ANH7 110 aa9.64□□□□□ -0.87
SSBP1-201ENST00000265304 TRGC2P03986 189 aa9.64□□□□□ -0.87
SSBP1-201ENST00000265304 LAGE3Q14657 143 aa9.64□□□□□ -0.87
SSBP1-201ENST00000265304 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
SSBP1-201ENST00000265304 ZNF25P17030 456 aaPredicted RBP9.63□□□□□ -0.87
SSBP1-201ENST00000265304 FCER1GP30273 86 aa9.63□□□□□ -0.87
SSBP1-201ENST00000265304 IFI27P40305 119 aaPredicted RBP9.63□□□□□ -0.87
SSBP1-201ENST00000265304 RBX1P62877 108 aa9.63□□□□□ -0.87
SSBP1-201ENST00000265304 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
SSBP1-201ENST00000265304 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
SSBP1-201ENST00000265304 Q0VG73 95 aa9.62□□□□□ -0.87
SSBP1-201ENST00000265304 ORMDL2Q53FV1 153 aa9.62□□□□□ -0.87
SSBP1-201ENST00000265304 MPV17L2Q567V2 206 aa9.62□□□□□ -0.87
SSBP1-201ENST00000265304 Q8N3U1 123 aa9.62□□□□□ -0.87
SSBP1-201ENST00000265304 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
SSBP1-201ENST00000265304 DNAH17Q9UFH2 4485 aa9.62□□□□□ -0.87
SSBP1-201ENST00000265304 DNAH10Q8IVF4 4471 aa9.61□□□□□ -0.87
SSBP1-201ENST00000265304 A0A087WX48 190 aa9.61□□□□□ -0.87
SSBP1-201ENST00000265304 GAGE6Q13070 117 aa9.61□□□□□ -0.87
SSBP1-201ENST00000265304 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
SSBP1-201ENST00000265304 PYGO1Q9Y3Y4 419 aa9.61□□□□□ -0.87
SSBP1-201ENST00000265304 NPSP0C0P6 89 aa9.6□□□□□ -0.87
SSBP1-201ENST00000265304 FGF6P10767 208 aa9.6□□□□□ -0.87
SSBP1-201ENST00000265304 G0S2P27469 103 aa9.6□□□□□ -0.87
SSBP1-201ENST00000265304 PRSS3P2Q8NHM4 247 aa9.6□□□□□ -0.87
SSBP1-201ENST00000265304 FAM104AQ969W3 186 aa9.6□□□□□ -0.87
SSBP1-201ENST00000265304 TMEM18Q96B42 140 aa9.6□□□□□ -0.87
SSBP1-201ENST00000265304 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
SSBP1-201ENST00000265304 FRAS1Q86XX4 4008 aa9.59□□□□□ -0.87
SSBP1-201ENST00000265304 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.59□□□□□ -0.87
SSBP1-201ENST00000265304 IGKV2-29A2NJV5 120 aaPredicted RBP9.59□□□□□ -0.87
SSBP1-201ENST00000265304 LINC01549A6NIU2 74 aa9.59□□□□□ -0.87
SSBP1-201ENST00000265304 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
SSBP1-201ENST00000265304 LINC00614P0C842 121 aa9.59□□□□□ -0.87
SSBP1-201ENST00000265304 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
SSBP1-201ENST00000265304 Q8N976 141 aa9.59□□□□□ -0.87
SSBP1-201ENST00000265304 RYR3Q15413 4870 aa9.59□□□□□ -0.87
SSBP1-201ENST00000265304 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 UBE2L6O14933 153 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 IGHV3-30P01768 117 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 IGHV3-33P01772 117 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 IGHV3-30-5P0DP03 117 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 RAB5BP61020 215 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
SSBP1-201ENST00000265304 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
SSBP1-201ENST00000265304 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
SSBP1-201ENST00000265304 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
SSBP1-201ENST00000265304 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
SSBP1-201ENST00000265304 CHCHD1Q96BP2 118 aaKnown RBP9.57□□□□□ -0.88
SSBP1-201ENST00000265304 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
SSBP1-201ENST00000265304 KLK12Q9UKR0 248 aa9.57□□□□□ -0.88
SSBP1-201ENST00000265304 A0A096LNJ9 63 aa9.56□□□□□ -0.88
SSBP1-201ENST00000265304 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
SSBP1-201ENST00000265304 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
SSBP1-201ENST00000265304 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
SSBP1-201ENST00000265304 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
SSBP1-201ENST00000265304 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms